RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 CCDC85CA6NKD9 419 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 B2RBV5 119 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 CBFA2T2O43439 604 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 GAS2O43903 313 aaKnown RBP4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 COL8A1P27658 744 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 POLR2BP30876 1174 aaKnown RBP4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 HEATR6Q6AI08 1181 aaKnown RBP4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 LETMD1Q6P1Q0 360 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 SHISA2Q6UWI4 295 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 ZNF662Q6ZS27 426 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 SPATC1Q76KD6 591 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 UBE3DQ7Z6J8 389 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 TXNRD3Q86VQ6 643 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 PPFIBP1Q86W92 1011 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 FAM20CQ8IXL6 584 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 C7orf61Q8IZ16 206 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 CRACR2BQ8N4Y2 399 aaPredicted RBP4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 BAHD1Q8TBE0 780 aaPredicted RBP4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 UBL7Q96S82 380 aaPredicted RBP4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 SSU72Q9NP77 194 aaKnown RBP4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 PRDM10Q9NQV6 1147 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 WHRNQ9P202 907 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 USP21Q9UK80 565 aa4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.8□□□□□ -1.64
RNU6-390P-201ENST00000516259 ESYT3A0FGR9 886 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 FAM229AH3BQW9 127 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 IGF2BP3O00425 579 aaKnown RBP eCLIP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 PPP1R12AO14974 1030 aaPredicted RBP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 KCNQ2O43526 872 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 DIAPH1O60610 1272 aaKnown RBP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 PPM1BO75688 479 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 SLITRK5O94991 958 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 VIL1P09327 827 aaKnown RBP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 FGFR1P11362 822 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 GLB1P16278 677 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 CD247P20963 164 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 KIR3DL1P43629 444 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 AUHQ13825 339 aaKnown RBP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 HSP90AA2PQ14568 343 aaPredicted RBP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 AXDND1Q5T1B0 1012 aaPredicted RBP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 CDPF1Q6NVV7 123 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 POMZP3Q6PJE2 187 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 CLEC10AQ8IUN9 316 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 SCUBE1Q8IWY4 988 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 AGGF1Q8N302 714 aaeCLIP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 ARHGEF39Q8N4T4 335 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 ENOX1Q8TC92 643 aaKnown RBP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 KISS1RQ969F8 398 aaPredicted RBP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 CCDC140Q96MF4 163 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 KREMEN1Q96MU8 473 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 SSBP4Q9BWG4 385 aaPredicted RBP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 C1GALT1Q9NS00 363 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 PCDHB10Q9UN67 800 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 DIS3Q9Y2L1 958 aaKnown RBP4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 FHOD1Q9Y613 1164 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 PTCH2Q9Y6C5 1203 aa4.79□□□□□ -1.64
RNU6-390P-201ENST00000516259 FAM95CA0A1B0GW59 222 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 A0A1W2PQU0 124 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 C9IYK1 514 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 RNF225M0QZC1 329 aaPredicted RBP4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 DHX15O43143 795 aaKnown RBP4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 EPHX1P07099 455 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 MAP4P27816 1152 aaKnown RBP4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 IREB2P48200 963 aaKnown RBP4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 RBM10P98175 930 aaKnown RBP4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 GRB10Q13322 594 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 NBPF9Q3BBW0 867 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 FNDC3BQ53EP0 1204 aaKnown RBP4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 PAOXQ6QHF9 649 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 SLC51AQ86UW1 340 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 ARMC10Q8N2F6 343 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 BVESQ8NE79 360 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 PIWIL2Q8TC59 973 aaKnown RBP4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 SYTL5Q8TDW5 730 aaPredicted RBP4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 FAM83CQ9BQN1 747 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 SPC25Q9HBM1 224 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 LEMD3Q9Y2U8 911 aa4.78□□□□□ -1.64
RNU6-390P-201ENST00000516259 TRAV20A0A0B4J274 112 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 FAM181BA6NEQ2 426 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 PLD2O14939 933 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 SHOXO15266 292 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 DNAJC6O75061 913 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 ALX3O95076 343 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 EOMESO95936 686 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 NFICP08651 508 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 FAM153BP0C7A2 387 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 BMP3P12645 472 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 ITGA4P13612 1032 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 CPSF6Q16630 551 aaKnown RBP eCLIP4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 PTPROQ16827 1216 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 FAM214BQ7L5A3 538 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 CCDC144CPQ8IYA2 1237 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 FBLIM1Q8WUP2 373 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 UTP4Q969X6 686 aaKnown RBP4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 MRGPRX3Q96LB0 322 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 DPH2Q9BQC3 489 aaPredicted RBP4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 AARSD1Q9BTE6 412 aaKnown RBP4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 DHRS4Q9BTZ2 278 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 MRPL4Q9BYD3 311 aaKnown RBP4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 KANSL2Q9H9L4 492 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms