RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 ZNF326Q5BKZ1 582 aaKnown RBP5.68□□□□□ -1.5
HERC4-215ENST00000515753 ZNF605Q86T29 641 aa5.68□□□□□ -1.5
HERC4-215ENST00000515753 GIPC2Q8TF65 315 aa5.68□□□□□ -1.5
HERC4-215ENST00000515753 TRIT1Q9H3H1 467 aaKnown RBP5.68□□□□□ -1.5
HERC4-215ENST00000515753 GPATCH2Q9NW75 528 aa5.68□□□□□ -1.5
HERC4-215ENST00000515753 TACC3Q9Y6A5 838 aa5.68□□□□□ -1.5
HERC4-215ENST00000515753 F6X3S4 739 aa5.67□□□□□ -1.5
HERC4-215ENST00000515753 LTKP29376 864 aa5.67□□□□□ -1.5
HERC4-215ENST00000515753 GALK1P51570 392 aa5.67□□□□□ -1.5
HERC4-215ENST00000515753 RPL6Q02878 288 aaKnown RBP5.67□□□□□ -1.5
HERC4-215ENST00000515753 TAF1CQ15572 869 aaPredicted RBP5.67□□□□□ -1.5
HERC4-215ENST00000515753 TSNAXIP1Q2TAA8 658 aa5.67□□□□□ -1.5
HERC4-215ENST00000515753 TSPYL5Q86VY4 417 aaPredicted RBP5.67□□□□□ -1.5
HERC4-215ENST00000515753 DTWD2Q8NBA8 298 aa5.67□□□□□ -1.5
HERC4-215ENST00000515753 PDZD8Q8NEN9 1154 aa5.67□□□□□ -1.5
HERC4-215ENST00000515753 MCOLN1Q9GZU1 580 aa5.67□□□□□ -1.5
HERC4-215ENST00000515753 BCL11AQ9H165 835 aa5.67□□□□□ -1.5
HERC4-215ENST00000515753 PCDHA11Q9Y5I1 949 aa5.67□□□□□ -1.5
HERC4-215ENST00000515753 RBM47A0AV96 593 aaKnown RBP5.66□□□□□ -1.5
HERC4-215ENST00000515753 SRFP11831 508 aa5.66□□□□□ -1.5
HERC4-215ENST00000515753 PLCG1P19174 1290 aa5.66□□□□□ -1.5
HERC4-215ENST00000515753 FAM13CQ8NE31 585 aa5.66□□□□□ -1.5
HERC4-215ENST00000515753 GPR62Q9BZJ7 368 aa5.66□□□□□ -1.5
HERC4-215ENST00000515753 MRS2Q9HD23 443 aa5.66□□□□□ -1.5
HERC4-215ENST00000515753 EBF1Q9UH73 591 aa5.66□□□□□ -1.5
HERC4-215ENST00000515753 MYOCOSA0A1B0GUC4 107 aa5.65□□□□□ -1.5
HERC4-215ENST00000515753 ZNF16P17020 682 aaPredicted RBP5.65□□□□□ -1.5
HERC4-215ENST00000515753 CTSWP56202 376 aa5.65□□□□□ -1.5
HERC4-215ENST00000515753 OXR1Q8N573 874 aa5.65□□□□□ -1.5
HERC4-215ENST00000515753 CYB5D2Q8WUJ1 264 aa5.65□□□□□ -1.5
HERC4-215ENST00000515753 C20orf173Q96LM9 149 aa5.65□□□□□ -1.5
HERC4-215ENST00000515753 FAM161BQ96MY7 647 aa5.65□□□□□ -1.5
HERC4-215ENST00000515753 SGPP1Q9BX95 441 aa5.65□□□□□ -1.5
HERC4-215ENST00000515753 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.5
HERC4-215ENST00000515753 VTI1BQ9UEU0 232 aa5.65□□□□□ -1.5
HERC4-215ENST00000515753 ADAM30Q9UKF2 790 aa5.65□□□□□ -1.5
HERC4-215ENST00000515753 KCNH3Q9ULD8 1083 aa5.65□□□□□ -1.5
HERC4-215ENST00000515753 HOXA5P20719 270 aa5.64□□□□□ -1.51
HERC4-215ENST00000515753 VAMP1P23763 118 aa5.64□□□□□ -1.51
HERC4-215ENST00000515753 PDE6BP35913 854 aa5.64□□□□□ -1.51
HERC4-215ENST00000515753 DLG4P78352 724 aa5.64□□□□□ -1.51
HERC4-215ENST00000515753 TMEM132EQ6IEE7 984 aa5.64□□□□□ -1.51
HERC4-215ENST00000515753 BNC2Q6ZN30 1099 aaPredicted RBP5.64□□□□□ -1.51
HERC4-215ENST00000515753 SLC6A17Q9H1V8 727 aa5.64□□□□□ -1.51
HERC4-215ENST00000515753 GPR160Q9UJ42 338 aa5.64□□□□□ -1.51
HERC4-215ENST00000515753 SHISA3A0PJX4 238 aa5.63□□□□□ -1.51
HERC4-215ENST00000515753 FITM1A5D6W6 292 aa5.63□□□□□ -1.51
HERC4-215ENST00000515753 PSPNO60542 156 aa5.63□□□□□ -1.51
HERC4-215ENST00000515753 BMP7P18075 431 aa5.63□□□□□ -1.51
HERC4-215ENST00000515753 TNNI2P48788 182 aa5.63□□□□□ -1.51
HERC4-215ENST00000515753 CCDC84Q86UT8 332 aaPredicted RBP5.63□□□□□ -1.51
HERC4-215ENST00000515753 IRF2BP1Q8IU81 584 aa5.63□□□□□ -1.51
HERC4-215ENST00000515753 SIRT2Q8IXJ6 389 aa5.63□□□□□ -1.51
HERC4-215ENST00000515753 LILRA2Q8N149 483 aa5.63□□□□□ -1.51
HERC4-215ENST00000515753 BAHD1Q8TBE0 780 aaPredicted RBP5.63□□□□□ -1.51
HERC4-215ENST00000515753 INTS4Q96HW7 963 aaKnown RBP5.63□□□□□ -1.51
HERC4-215ENST00000515753 RAPGEFL1Q9UHV5 662 aa5.63□□□□□ -1.51
HERC4-215ENST00000515753 YBX2Q9Y2T7 364 aaKnown RBP5.63□□□□□ -1.51
HERC4-215ENST00000515753 ADAMTS20P59510 1910 aa5.62□□□□□ -1.51
HERC4-215ENST00000515753 ERMP1Q7Z2K6 904 aa5.62□□□□□ -1.51
HERC4-215ENST00000515753 PHC3Q8NDX5 983 aa5.62□□□□□ -1.51
HERC4-215ENST00000515753 RNF141Q8WVD5 230 aa5.62□□□□□ -1.51
HERC4-215ENST00000515753 DHX38Q92620 1227 aaKnown RBP5.62□□□□□ -1.51
HERC4-215ENST00000515753 SYTL4Q96C24 671 aaPredicted RBP5.62□□□□□ -1.51
HERC4-215ENST00000515753 RHOVQ96L33 236 aa5.62□□□□□ -1.51
HERC4-215ENST00000515753 RSRP1Q9BUV0 290 aa5.62□□□□□ -1.51
HERC4-215ENST00000515753 KLHL3Q9UH77 587 aa5.62□□□□□ -1.51
HERC4-215ENST00000515753 CHURC1-FNTBB4DL54 471 aa5.61□□□□□ -1.51
HERC4-215ENST00000515753 GRIN3BO60391 1043 aa5.61□□□□□ -1.51
HERC4-215ENST00000515753 BPNT1O95861 308 aa5.61□□□□□ -1.51
HERC4-215ENST00000515753 YARSP54577 528 aaKnown RBP5.61□□□□□ -1.51
HERC4-215ENST00000515753 TEKQ02763 1124 aa5.61□□□□□ -1.51
HERC4-215ENST00000515753 PWP1Q13610 501 aa5.61□□□□□ -1.51
HERC4-215ENST00000515753 KREMEN1Q96MU8 473 aa5.61□□□□□ -1.51
HERC4-215ENST00000515753 ZCCHC4Q9H5U6 513 aa5.61□□□□□ -1.51
HERC4-215ENST00000515753 ZNF552Q9H707 407 aaPredicted RBP5.61□□□□□ -1.51
HERC4-215ENST00000515753 CWC22Q9HCG8 908 aaKnown RBP5.61□□□□□ -1.51
HERC4-215ENST00000515753 GCM1Q9NP62 436 aa5.61□□□□□ -1.51
HERC4-215ENST00000515753 PARD6AQ9NPB6 346 aa5.61□□□□□ -1.51
HERC4-215ENST00000515753 CNOT6Q9ULM6 557 aaKnown RBP5.61□□□□□ -1.51
HERC4-215ENST00000515753 CILPO75339 1184 aa5.6□□□□□ -1.51
HERC4-215ENST00000515753 F13A1P00488 732 aa5.6□□□□□ -1.51
HERC4-215ENST00000515753 LMNB2Q03252 620 aa5.6□□□□□ -1.51
HERC4-215ENST00000515753 NR0B2Q15466 257 aa5.6□□□□□ -1.51
HERC4-215ENST00000515753 CLEC16AQ2KHT3 1053 aa5.6□□□□□ -1.51
HERC4-215ENST00000515753 TMEM201Q5SNT2 666 aa5.6□□□□□ -1.51
HERC4-215ENST00000515753 SPPL2CQ8IUH8 684 aa5.6□□□□□ -1.51
HERC4-215ENST00000515753 RGS22Q8NE09 1264 aa5.6□□□□□ -1.51
HERC4-215ENST00000515753 SHISA4Q96DD7 197 aa5.6□□□□□ -1.51
HERC4-215ENST00000515753 KCNQ5Q9NR82 932 aa5.6□□□□□ -1.51
HERC4-215ENST00000515753 REV1Q9UBZ9 1251 aa5.6□□□□□ -1.51
HERC4-215ENST00000515753 TEX51A0A1B0GUA7 166 aa5.59□□□□□ -1.51
HERC4-215ENST00000515753 FAM221AA4D161 298 aa5.59□□□□□ -1.51
HERC4-215ENST00000515753 PEX10O60683 326 aa5.59□□□□□ -1.51
HERC4-215ENST00000515753 SEMA7AO75326 666 aa5.59□□□□□ -1.51
HERC4-215ENST00000515753 EFEMP2O95967 443 aa5.59□□□□□ -1.51
HERC4-215ENST00000515753 PF4P02776 101 aa5.59□□□□□ -1.51
HERC4-215ENST00000515753 CAMK2GQ13555 558 aaPredicted RBP5.59□□□□□ -1.51
HERC4-215ENST00000515753 SSPNQ14714 243 aa5.59□□□□□ -1.51
HERC4-215ENST00000515753 LDLRAD1Q5T700 205 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms