RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 ASCC2Q9H1I8 757 aaPredicted RBP11.31□□□□□ -0.6
CSNK1A1-206ENST00000515748 BOLA2Q9H3K6 86 aa11.31□□□□□ -0.6
CSNK1A1-206ENST00000515748 OSBPL3Q9H4L5 887 aa11.31□□□□□ -0.6
CSNK1A1-206ENST00000515748 NDUFB9Q9Y6M9 179 aa11.31□□□□□ -0.6
CSNK1A1-206ENST00000515748 DOCK2Q92608 1830 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 PEX10O60683 326 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 CTNND1O60716 968 aaKnown RBP11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 IDH1O75874 414 aaKnown RBP11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 NEFLP07196 543 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 RAG1P15918 1043 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 PDE6AP16499 860 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 PLCG2P16885 1265 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 PDE1AP54750 535 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 TLE2Q04725 743 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 NFIAQ12857 509 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 PABPC4Q13310 644 aaKnown RBP eCLIP11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 SKIV2LQ15477 1246 aaKnown RBP11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 MORN1Q5T089 497 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 MFSD14CQ5VZR4 134 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 ADGRA1Q86SQ6 560 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 ZFPM1Q8IX07 1006 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 MICALL1Q8N3F8 863 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 GPRC5AQ8NFJ5 357 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 HERVK_113Q902F9 699 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 LNPKQ9C0E8 428 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 KCNH6Q9H252 994 aa11.3□□□□□ -0.6
CSNK1A1-206ENST00000515748 TCRBV5S4A2TA0A5A2 114 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 ST18O60284 1047 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 ENTPD3O75355 529 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 BAG3O95817 575 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 MAPK4P31152 587 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 MAP3K10Q02779 954 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 UBE3CQ15386 1083 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 SLC9C2Q5TAH2 1124 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 C1orf53Q5VUE5 145 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 TSHZ3Q63HK5 1081 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 CCDC84Q86UT8 332 aaPredicted RBP11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 KBTBD3Q8NAB2 608 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.29□□□□□ -0.61e-10■■■■□ 22.7
CSNK1A1-206ENST00000515748 USP40Q9NVE5 1235 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 PLXNB2O15031 1838 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 REV3LO60673 3130 aa11.29□□□□□ -0.6
CSNK1A1-206ENST00000515748 ATRNL1Q5VV63 1379 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 WDFY4Q6ZS81 3184 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 KBTBD13C9JR72 458 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 KIAA0355O15063 1070 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 ADCYAP1R1P41586 468 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 SPP2Q13103 211 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 Q3C1V9 767 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 B4GALNT3Q6L9W6 998 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 ZSCAN25Q6NSZ9 544 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 CENPQQ7L2Z9 268 aaPredicted RBP11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 CCAR1Q8IX12 1150 aaKnown RBP11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 MAGEB6Q8N7X4 407 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 FERMT2Q96AC1 680 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 EDC3Q96F86 508 aaKnown RBP11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 APBA2Q99767 749 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 RIOK1Q9BRS2 568 aaKnown RBP11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 CD320Q9NPF0 282 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 FLRT1Q9NZU1 646 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 MSRAQ9UJ68 235 aa11.28□□□□□ -0.6
CSNK1A1-206ENST00000515748 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 CLTBP09497 229 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 CYP7A1P22680 504 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 ADD2P35612 726 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 RGS3P49796 1198 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 LRRFIP1Q32MZ4 808 aaKnown RBP11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 GPR142Q7Z601 462 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 PLEKHH3Q7Z736 793 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 PLEKHM2Q8IWE5 1019 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 NOL10Q9BSC4 688 aaKnown RBP11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 BCL11AQ9H165 835 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 TXNRD2Q9NNW7 524 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 RBPJLQ9UBG7 517 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 COG5Q9UP83 839 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 ZDBF2Q9HCK1 2354 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 ZNF532Q9HCE3 1301 aa11.27□□□□□ -0.61
CSNK1A1-206ENST00000515748 MYCNP04198 464 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 SLURP2P0DP57 97 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 HMGCS2P54868 508 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 ATP2B2Q01814 1243 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 C16orf59Q7L2K0 433 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 TEX11Q8IYF3 940 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 TRPV1Q8NER1 839 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 SH3RF3Q8TEJ3 882 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 PHOX2BQ99453 314 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 PORCNQ9H237 461 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 NKX2-4Q9H2Z4 354 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 SLC28A3Q9HAS3 691 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 DDX4Q9NQI0 724 aaKnown RBP11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 TMEM39AQ9NV64 488 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 AATFQ9NY61 560 aaKnown RBP eCLIP11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 AK9Q5TCS8 1911 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 FLT1P17948 1338 aa11.26□□□□□ -0.61
CSNK1A1-206ENST00000515748 RNF113AO15541 343 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-206ENST00000515748 PDE4AP27815 886 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms