RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 TSGA10IPQ3SY00 556 aa17.75■□□□□ 0.43
PDCD6-211ENST00000515587 CLEC10AQ8IUN9 316 aa17.75■□□□□ 0.43
PDCD6-211ENST00000515587 PROCA1Q8NCQ7 364 aaPredicted RBP17.75■□□□□ 0.43
PDCD6-211ENST00000515587 ACER1Q8TDN7 264 aa17.75■□□□□ 0.43
PDCD6-211ENST00000515587 GOPCQ9HD26 462 aa17.75■□□□□ 0.43
PDCD6-211ENST00000515587 TMX2Q9Y320 296 aa17.75■□□□□ 0.43
PDCD6-211ENST00000515587 TAF6LQ9Y6J9 622 aa17.75■□□□□ 0.43
PDCD6-211ENST00000515587 ERICH2A1L162 156 aa17.74■□□□□ 0.43
PDCD6-211ENST00000515587 TESPA1A2RU30 521 aaPredicted RBP17.74■□□□□ 0.43
PDCD6-211ENST00000515587 RAD21O60216 631 aa17.74■□□□□ 0.43
PDCD6-211ENST00000515587 TBC1D8O95759 1140 aa17.74■□□□□ 0.43
PDCD6-211ENST00000515587 SH3D19Q5HYK7 790 aa17.74■□□□□ 0.43
PDCD6-211ENST00000515587 STOX1Q6ZVD7 989 aa17.74■□□□□ 0.43
PDCD6-211ENST00000515587 BRI3BPQ8WY22 251 aa17.74■□□□□ 0.43
PDCD6-211ENST00000515587 KCNB2Q92953 911 aa17.74■□□□□ 0.43
PDCD6-211ENST00000515587 TTC14Q96N46 770 aa17.74■□□□□ 0.43
PDCD6-211ENST00000515587 UPF2Q9HAU5 1272 aaKnown RBP17.74■□□□□ 0.43
PDCD6-211ENST00000515587 ZSWIM5Q9P217 1185 aa17.74■□□□□ 0.43
PDCD6-211ENST00000515587 SYNPO2Q9UMS6 1093 aa17.74■□□□□ 0.43
PDCD6-211ENST00000515587 A0A1W2PRG0 241 aa17.73■□□□□ 0.43
PDCD6-211ENST00000515587 NMT2O60551 498 aa17.73■□□□□ 0.43
PDCD6-211ENST00000515587 ALDH1A1P00352 501 aa17.73■□□□□ 0.43
PDCD6-211ENST00000515587 HMGB1P09429 215 aaKnown RBP17.73■□□□□ 0.43
PDCD6-211ENST00000515587 MCM5P33992 734 aa17.73■□□□□ 0.43
PDCD6-211ENST00000515587 PABPC4Q13310 644 aaKnown RBP eCLIP17.73■□□□□ 0.43
PDCD6-211ENST00000515587 FBXO46Q6PJ61 603 aaPredicted RBP17.73■□□□□ 0.43
PDCD6-211ENST00000515587 SIAH1Q8IUQ4 282 aa17.73■□□□□ 0.43
PDCD6-211ENST00000515587 RASEFQ8IZ41 740 aa17.73■□□□□ 0.43
PDCD6-211ENST00000515587 MKL1Q969V6 931 aa17.73■□□□□ 0.43
PDCD6-211ENST00000515587 ZSCAN10Q96SZ4 725 aaPredicted RBP17.73■□□□□ 0.43
PDCD6-211ENST00000515587 ZKSCAN3Q9BRR0 538 aa17.73■□□□□ 0.43
PDCD6-211ENST00000515587 IL17RBQ9NRM6 502 aa17.73■□□□□ 0.43
PDCD6-211ENST00000515587 SNX14Q9Y5W7 946 aa17.73■□□□□ 0.43
PDCD6-211ENST00000515587 MKI67P46013 3256 aaKnown RBP17.72■□□□□ 0.43
PDCD6-211ENST00000515587 SEC24BO95487 1268 aa17.72■□□□□ 0.43
PDCD6-211ENST00000515587 PSMA5P28066 241 aa17.72■□□□□ 0.43
PDCD6-211ENST00000515587 CYB5R4Q7L1T6 521 aa17.72■□□□□ 0.43
PDCD6-211ENST00000515587 ANKRD23Q86SG2 305 aa17.72■□□□□ 0.43
PDCD6-211ENST00000515587 DGKHQ86XP1 1220 aa17.72■□□□□ 0.43
PDCD6-211ENST00000515587 IFNL1Q8IU54 200 aa17.72■□□□□ 0.43
PDCD6-211ENST00000515587 NEK1Q96PY6 1258 aa17.72■□□□□ 0.43
PDCD6-211ENST00000515587 ZCCHC17Q9NP64 241 aaKnown RBP17.72■□□□□ 0.43
PDCD6-211ENST00000515587 AGTPBP1Q9UPW5 1226 aa17.72■□□□□ 0.43
PDCD6-211ENST00000515587 TNKSO95271 1327 aa17.72■□□□□ 0.43
PDCD6-211ENST00000515587 IFIT3O14879 490 aaKnown RBP17.71■□□□□ 0.43
PDCD6-211ENST00000515587 PRC1O43663 620 aa17.71■□□□□ 0.43
PDCD6-211ENST00000515587 TOP1P11387 765 aaKnown RBP17.71■□□□□ 0.43
PDCD6-211ENST00000515587 MB21D2Q8IYB1 491 aaPredicted RBP17.71■□□□□ 0.43
PDCD6-211ENST00000515587 LRRC47Q8N1G4 583 aaKnown RBP17.71■□□□□ 0.43
PDCD6-211ENST00000515587 LPAR1Q92633 364 aa17.71■□□□□ 0.43
PDCD6-211ENST00000515587 C12orf42Q96LP6 360 aa17.71■□□□□ 0.43
PDCD6-211ENST00000515587 JAKMIP1Q96N16 626 aaKnown RBP17.71■□□□□ 0.43
PDCD6-211ENST00000515587 VCPKMTQ9H867 229 aa17.71■□□□□ 0.43
PDCD6-211ENST00000515587 EMILIN3Q9NT22 766 aa17.71■□□□□ 0.43
PDCD6-211ENST00000515587 POTEFA5A3E0 1075 aa17.7■□□□□ 0.42
PDCD6-211ENST00000515587 BTBD19C9JJ37 291 aa17.7■□□□□ 0.42
PDCD6-211ENST00000515587 IGF2BP3O00425 579 aaKnown RBP eCLIP17.7■□□□□ 0.42
PDCD6-211ENST00000515587 MOGSQ13724 837 aa17.7■□□□□ 0.42
PDCD6-211ENST00000515587 IFIT1BQ5T764 474 aaKnown RBP17.7■□□□□ 0.42
PDCD6-211ENST00000515587 PTPN18Q99952 460 aa17.7■□□□□ 0.42
PDCD6-211ENST00000515587 MTA3Q9BTC8 594 aa17.7■□□□□ 0.42
PDCD6-211ENST00000515587 KAT14Q9H8E8 782 aa17.7■□□□□ 0.42
PDCD6-211ENST00000515587 PNMA3Q9UL41 463 aa17.7■□□□□ 0.42
PDCD6-211ENST00000515587 SLC45A1Q9Y2W3 748 aa17.7■□□□□ 0.42
PDCD6-211ENST00000515587 F5H6K3 240 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 GPR25O00155 361 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 PDHXO00330 501 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 VCAM1P19320 739 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 OSBPP22059 807 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 NOVP48745 357 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 ANAPC15P60006 121 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 KLRC3Q07444 240 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 WTAPQ15007 396 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 ADCK5Q3MIX3 580 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 TMEM67Q5HYA8 995 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 BLOC1S2Q6QNY1 142 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 DHX32Q7L7V1 743 aaKnown RBP17.69■□□□□ 0.42
PDCD6-211ENST00000515587 CHST3Q7LGC8 479 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 SPICE1Q8N0Z3 855 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 FAM43AQ8N2R8 423 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 ENAHQ8N8S7 591 aaPredicted RBP17.69■□□□□ 0.42
PDCD6-211ENST00000515587 GMCL1P1Q8NEA9 526 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 NKX2-3Q8TAU0 364 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 TMEM87BQ96K49 555 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 TMEM47Q9BQJ4 181 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 WDR19Q8NEZ3 1342 aa17.69■□□□□ 0.42
PDCD6-211ENST00000515587 USP17L15C9J2P7 530 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 USP17L13C9JLJ4 530 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 USP17L11C9JVI0 530 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 USP17L18D6R9N7 530 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 USP17L22D6RA61 530 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 USP17L17D6RBQ6 530 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 USP17L19D6RCP7 530 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 USP17L20D6RJB6 530 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 WDR46O15213 610 aaKnown RBP17.68■□□□□ 0.42
PDCD6-211ENST00000515587 CASTP20810 708 aaKnown RBP17.68■□□□□ 0.42
PDCD6-211ENST00000515587 IRX3P78415 501 aaPredicted RBP17.68■□□□□ 0.42
PDCD6-211ENST00000515587 USP17L24Q0WX57 530 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 TAF1CQ15572 869 aaPredicted RBP17.68■□□□□ 0.42
PDCD6-211ENST00000515587 TREML2Q5T2D2 321 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms