RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 MAP2K1Q02750 393 aaPredicted RBP11.8□□□□□ -0.52
SNF8-214ENST00000515174 GRM1Q13255 1194 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 GRM4Q14833 912 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 SLC39A14Q15043 492 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 PKN1Q16512 942 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 CDC42EP5Q6NZY7 148 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 METTL16Q86W50 562 aaKnown RBP11.8□□□□□ -0.52
SNF8-214ENST00000515174 RAB11FIP4Q86YS3 637 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 NIM1KQ8IY84 436 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 NUP133Q8WUM0 1156 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 DYNLL2Q96FJ2 89 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 CCDC17Q96LX7 622 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 BEGAINQ9BUH8 593 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 KAT14Q9H8E8 782 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 IGKV6D-41A0A0C4DH26 115 aa11.79□□□□□ -0.52
SNF8-214ENST00000515174 CTAGE5O15320 804 aa11.79□□□□□ -0.52
SNF8-214ENST00000515174 ITGBL1O95965 494 aaPredicted RBP11.79□□□□□ -0.52
SNF8-214ENST00000515174 VIL1P09327 827 aaKnown RBP11.79□□□□□ -0.52
SNF8-214ENST00000515174 EPHX2P34913 555 aa11.79□□□□□ -0.52
SNF8-214ENST00000515174 EVX2Q03828 476 aa11.79□□□□□ -0.52
SNF8-214ENST00000515174 ANO1Q5XXA6 986 aa11.79□□□□□ -0.52
SNF8-214ENST00000515174 OTUD7BQ6GQQ9 843 aa11.79□□□□□ -0.52
SNF8-214ENST00000515174 CCDC144CPQ8IYA2 1237 aa11.79□□□□□ -0.52
SNF8-214ENST00000515174 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
SNF8-214ENST00000515174 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
SNF8-214ENST00000515174 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
SNF8-214ENST00000515174 AIFM3Q96NN9 605 aa11.79□□□□□ -0.52
SNF8-214ENST00000515174 OSBPL5Q9H0X9 879 aaPredicted RBP11.79□□□□□ -0.52
SNF8-214ENST00000515174 SH3GLB2Q9NR46 395 aa11.79□□□□□ -0.52
SNF8-214ENST00000515174 MYH15Q9Y2K3 1946 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 COL2A1P02458 1487 aaPredicted RBP11.78□□□□□ -0.52
SNF8-214ENST00000515174 FAM237AA0A1B0GTK4 181 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 SYCE3A1L190 88 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 PALM3A6NDB9 673 aaPredicted RBP11.78□□□□□ -0.52
SNF8-214ENST00000515174 KIF28PB7ZC32 967 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 F8W031 263 aaPredicted RBP11.78□□□□□ -0.52
SNF8-214ENST00000515174 ENTPD3O75355 529 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 TOP1P11387 765 aaKnown RBP11.78□□□□□ -0.52
SNF8-214ENST00000515174 GUCY1A2P33402 732 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 MLLT1Q03111 559 aaPredicted RBP11.78□□□□□ -0.52
SNF8-214ENST00000515174 UVSSAQ2YD98 709 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 RILPL1Q5EBL4 403 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 MAP1SQ66K74 1059 aaPredicted RBP11.78□□□□□ -0.52
SNF8-214ENST00000515174 PNMA8AQ86V59 439 aaPredicted RBP11.78□□□□□ -0.52
SNF8-214ENST00000515174 FOXP4Q8IVH2 680 aaPredicted RBP11.78□□□□□ -0.52
SNF8-214ENST00000515174 NOSTRINQ8IVI9 506 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 SRBD1Q8N5C6 995 aaKnown RBP11.78□□□□□ -0.52
SNF8-214ENST00000515174 ENGASEQ8NFI3 743 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 GMLQ99445 158 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 TMEM47Q9BQJ4 181 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 FUCA2Q9BTY2 467 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 PHF20Q9BVI0 1012 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 TSPY26PQ9H489 355 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 SERPINB13Q9UIV8 391 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 ZNF541Q9H0D2 1346 aa11.78□□□□□ -0.52
SNF8-214ENST00000515174 PSMD14O00487 310 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 SPTLC2O15270 562 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 NMT2O60551 498 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 RAD17O75943 681 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 HLA-DOAP06340 250 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 LIG1P18858 919 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 CMA1P23946 247 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 PTPAQ15257 358 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 PFKFB3Q16875 520 aaPredicted RBP11.77□□□□□ -0.53
SNF8-214ENST00000515174 GALNT17Q6IS24 598 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 MTMR14Q8NCE2 650 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 SPZ1Q9BXG8 430 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 CLSTN2Q9H4D0 955 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 DDX4Q9NQI0 724 aaKnown RBP11.77□□□□□ -0.53
SNF8-214ENST00000515174 GJB4Q9NTQ9 266 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 SAP30BPQ9UHR5 308 aaKnown RBP11.77□□□□□ -0.53
SNF8-214ENST00000515174 PCDHA7Q9UN72 937 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 V9GY48 417 aaPredicted RBP11.77□□□□□ -0.53
SNF8-214ENST00000515174 CNTNAP5Q8WYK1 1306 aa11.77□□□□□ -0.53
SNF8-214ENST00000515174 ATAD5Q96QE3 1844 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 RASSF10A6NK89 507 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 PPFIA3O75145 1194 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 PLEKHA8P1O95397 391 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 CAVIN2O95810 425 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 BMP15O95972 392 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 SCNN1DP51172 638 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 FAM160A1Q05DH4 1040 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 STK38Q15208 465 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 FKBP1CQ5VVH2 108 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
SNF8-214ENST00000515174 KIAA0825Q8IV33 1275 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 DIS3L2Q8IYB7 885 aaKnown RBP11.76□□□□□ -0.53
SNF8-214ENST00000515174 ELOA2Q8IYF1 753 aaPredicted RBP11.76□□□□□ -0.53
SNF8-214ENST00000515174 SLC44A5Q8NCS7 719 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 AGBL3Q8NEM8 1001 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 RBSNQ9H1K0 784 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 NUP62CLQ9H1M0 184 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 MTMR4Q9NYA4 1195 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 DACT1Q9NYF0 836 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 PI4KBQ9UBF8 816 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 MAD2L2Q9UI95 211 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 ZNRF3Q9ULT6 936 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 CLIC4Q9Y696 253 aa11.76□□□□□ -0.53
SNF8-214ENST00000515174 ATRNL1Q5VV63 1379 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms