RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 PCDHA12Q9UN75 941 aa16.04■□□□□ 0.16
TRIO-222ENST00000515144 CYP4A11Q02928 519 aa16.04■□□□□ 0.16
TRIO-222ENST00000515144 LONRF3Q496Y0 759 aa16.04■□□□□ 0.16
TRIO-222ENST00000515144 RAB3IL1Q8TBN0 382 aa16.04■□□□□ 0.16
TRIO-222ENST00000515144 PRDM10Q9NQV6 1147 aa16.04■□□□□ 0.16
TRIO-222ENST00000515144 PDE6AP16499 860 aa16.04■□□□□ 0.16
TRIO-222ENST00000515144 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
TRIO-222ENST00000515144 TACC1O75410 805 aa16.04■□□□□ 0.16
TRIO-222ENST00000515144 DLATP10515 647 aaKnown RBP16.04■□□□□ 0.16
TRIO-222ENST00000515144 A0A0D9SFI3 127 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 SKILP12757 684 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 MXRA7P84157 204 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 SLFN13Q68D06 897 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 ZSCAN30Q86W11 494 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 ARHGEF25Q86VW2 580 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 TTC30AQ86WT1 665 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 GOLGA6L9A6NEM1 432 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 KIF2AO00139 706 aaPredicted RBP16.03■□□□□ 0.16
TRIO-222ENST00000515144 HOXB7P09629 217 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 CCDC175P0C221 793 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 RNASELQ05823 741 aaKnown RBP16.03■□□□□ 0.16
TRIO-222ENST00000515144 INF2Q27J81 1249 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 CSGALNACT2Q8N6G5 542 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 MRPL11Q9Y3B7 192 aaKnown RBP16.03■□□□□ 0.16
TRIO-222ENST00000515144 ADGRL3Q9HAR2 1447 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 HLFQ16534 295 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 ZNF569Q5MCW4 686 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 INSRP06213 1382 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 KCNH3Q9ULD8 1083 aa16.03■□□□□ 0.16
TRIO-222ENST00000515144 LIG4P49917 911 aa16.02■□□□□ 0.16
TRIO-222ENST00000515144 TBC1D8BQ0IIM8 1120 aa16.02■□□□□ 0.16
TRIO-222ENST00000515144 TBC1D9BQ66K14 1250 aa16.02■□□□□ 0.16
TRIO-222ENST00000515144 MTERF4Q7Z6M4 381 aaKnown RBP16.02■□□□□ 0.16
TRIO-222ENST00000515144 NOP9Q86U38 636 aaKnown RBP16.02■□□□□ 0.16
TRIO-222ENST00000515144 RPS6KC1Q96S38 1066 aa16.02■□□□□ 0.16
TRIO-222ENST00000515144 BABAM1Q9NWV8 329 aa16.02■□□□□ 0.16
TRIO-222ENST00000515144 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.02■□□□□ 0.161e-8■□□□□ 11
TRIO-222ENST00000515144 V9GYY5 206 aaPredicted RBP16.02■□□□□ 0.16
TRIO-222ENST00000515144 TET3O43151 1660 aa16.02■□□□□ 0.16
TRIO-222ENST00000515144 M0R2C6 588 aa16.02■□□□□ 0.16
TRIO-222ENST00000515144 IL6STP40189 918 aaPredicted RBP16.02■□□□□ 0.16
TRIO-222ENST00000515144 ARPP19P56211 112 aa16.02■□□□□ 0.16
TRIO-222ENST00000515144 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.16
TRIO-222ENST00000515144 CCDC186Q7Z3E2 898 aa16.02■□□□□ 0.16
TRIO-222ENST00000515144 PGBD1Q96JS3 809 aa16.02■□□□□ 0.16
TRIO-222ENST00000515144 PCCAP05165 728 aaPredicted RBP16.02■□□□□ 0.15
TRIO-222ENST00000515144 ASIC2Q16515 512 aa16.02■□□□□ 0.15
TRIO-222ENST00000515144 PTPROQ16827 1216 aa16.02■□□□□ 0.15
TRIO-222ENST00000515144 SELENOSQ9BQE4 189 aa16.02■□□□□ 0.15
TRIO-222ENST00000515144 CD2APQ9Y5K6 639 aa16.02■□□□□ 0.15
TRIO-222ENST00000515144 ERVK-7P63135 1459 aa16.02■□□□□ 0.15
TRIO-222ENST00000515144 CIAPIN1Q6FI81 312 aa16.02■□□□□ 0.15
TRIO-222ENST00000515144 DCUN1D2Q6PH85 259 aa16.02■□□□□ 0.15
TRIO-222ENST00000515144 BBXQ8WY36 941 aaPredicted RBP16.02■□□□□ 0.15
TRIO-222ENST00000515144 TLR7Q9NYK1 1049 aaKnown RBP16.02■□□□□ 0.15
TRIO-222ENST00000515144 ITSN1Q15811 1721 aa16.02■□□□□ 0.15
TRIO-222ENST00000515144 KCTD2Q14681 263 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 EHBP1Q8NDI1 1231 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 EEF2KMTQ96G04 330 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 PSMB7Q99436 277 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 USP44Q9H0E7 712 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 CCDC66A2RUB6 948 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 ZBTB24O43167 697 aaPredicted RBP16.01■□□□□ 0.15
TRIO-222ENST00000515144 KCNQ2O43526 872 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 CASC4Q6P4E1 433 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 SYNRGQ9UMZ2 1314 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 PDE8BO95263 885 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 CDC37L1Q7L3B6 337 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 GPBP1Q86WP2 473 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 LZTS2Q9BRK4 669 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 ZHX1Q9UKY1 873 aaPredicted RBP16.01■□□□□ 0.15
TRIO-222ENST00000515144 PER1O15534 1290 aaPredicted RBP16.01■□□□□ 0.15
TRIO-222ENST00000515144 FGAP02671 866 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 ZNF341Q9BYN7 854 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 LRFN2Q9ULH4 789 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 NPR1P16066 1061 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 HSPA1LP34931 641 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 IREB2P48200 963 aaKnown RBP16.01■□□□□ 0.15
TRIO-222ENST00000515144 CYP2D7A0A087X1C5 515 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 USP17L8P0C7I0 530 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 ERCC5P28715 1186 aaPredicted RBP16.01■□□□□ 0.15
TRIO-222ENST00000515144 PRPHP41219 470 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 DIXDC1Q155Q3 683 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 BSPRYQ5W0U4 402 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 KRT25Q7Z3Z0 450 aa16.01■□□□□ 0.15
TRIO-222ENST00000515144 K7ENM7 598 aa16■□□□□ 0.15
TRIO-222ENST00000515144 COBLO75128 1261 aa16■□□□□ 0.15
TRIO-222ENST00000515144 MCM6Q14566 821 aa16■□□□□ 0.15
TRIO-222ENST00000515144 RILPL1Q5EBL4 403 aa16■□□□□ 0.15
TRIO-222ENST00000515144 LUC7L2Q9Y383 392 aaKnown RBP16■□□□□ 0.15
TRIO-222ENST00000515144 SPDYE16A6NNV3 312 aaPredicted RBP16■□□□□ 0.15
TRIO-222ENST00000515144 STAT2P52630 851 aa16■□□□□ 0.15
TRIO-222ENST00000515144 SPDYE2Q495Y8 402 aa16■□□□□ 0.15
TRIO-222ENST00000515144 DNAJC21Q5F1R6 531 aaKnown RBP16■□□□□ 0.15
TRIO-222ENST00000515144 LEMD3Q9Y2U8 911 aa16■□□□□ 0.15
TRIO-222ENST00000515144 CRCPO75575 148 aa16■□□□□ 0.15
TRIO-222ENST00000515144 NLRP10Q86W26 655 aa16■□□□□ 0.15
TRIO-222ENST00000515144 LMBR1Q8WVP7 490 aa16■□□□□ 0.15
TRIO-222ENST00000515144 RAD50Q92878 1312 aa16■□□□□ 0.15
TRIO-222ENST00000515144 SCYL2Q6P3W7 929 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms