RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 ZDHHC16Q969W1 377 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 CLMNQ96JQ2 1002 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 KRT23Q9C075 422 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 IL25Q9H293 177 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 SH2D4AQ9H788 454 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 ELP3Q9H9T3 547 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 HCSTQ9UBK5 93 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 VPS9D1Q9Y2B5 631 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMAD1-213ENST00000514778 SLC45A1Q9Y2W3 748 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 MYH1P12882 1939 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 SIPA1L1O43166 1804 aa8.4□□□□□ -1.07
SMAD1-213ENST00000514778 THSD7BQ9C0I4 1608 aa8.4□□□□□ -1.07
SMAD1-213ENST00000514778 CYP2D7A0A087X1C5 515 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 FAM196BA6NMK8 535 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 CA12O43570 354 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 ALDH1A1P00352 501 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 GH2P01242 217 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 RASA1P20936 1047 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 USP14P54578 494 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 MAP2K1Q02750 393 aaPredicted RBP8.39□□□□□ -1.07
SMAD1-213ENST00000514778 TRDNQ13061 729 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 CAMK2BQ13554 666 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 KRT32Q14532 448 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 NECTIN1Q15223 517 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 CCDC178Q5BJE1 867 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 SH3D19Q5HYK7 790 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 OTUD7BQ6GQQ9 843 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 CYP4F22Q6NT55 531 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 FASTKD5Q7L8L6 764 aaKnown RBP8.39□□□□□ -1.07
SMAD1-213ENST00000514778 NEDD1Q8NHV4 660 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 ESR2Q92731 530 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 MKL1Q969V6 931 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 DYNLL2Q96FJ2 89 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 TTC14Q96N46 770 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 MTA3Q9BTC8 594 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 ANO2Q9NQ90 1003 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 TCP11L1Q9NUJ3 509 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 FZD1Q9UP38 647 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 ZHX2Q9Y6X8 837 aa8.39□□□□□ -1.07
SMAD1-213ENST00000514778 LAMB1P07942 1786 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 IGKV6D-41A0A0C4DH26 115 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 A0A0G2JLL6 359 aaPredicted RBP8.38□□□□□ -1.07
SMAD1-213ENST00000514778 USP17L10C9JJH3 530 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 IRF6O14896 467 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 TSPY3P0CV98 308 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 TSPY8P0CW00 308 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 ZKSCAN1P17029 563 aaPredicted RBP8.38□□□□□ -1.07
SMAD1-213ENST00000514778 NOVP48745 357 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 BACE1P56817 501 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 TFAP4Q01664 338 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 PTH1RQ03431 593 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 RRP1BQ14684 758 aaKnown RBP8.38□□□□□ -1.07
SMAD1-213ENST00000514778 PAXIP1Q6ZW49 1069 aaPredicted RBP8.38□□□□□ -1.07
SMAD1-213ENST00000514778 PRRT2Q7Z6L0 340 aaPredicted RBP8.38□□□□□ -1.07
SMAD1-213ENST00000514778 PROCA1Q8NCQ7 364 aaPredicted RBP8.38□□□□□ -1.07
SMAD1-213ENST00000514778 LPAR1Q92633 364 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 KCNB2Q92953 911 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 C12orf42Q96LP6 360 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 CFHR5Q9BXR6 569 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 KIAA1683Q9H0B3 1180 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 ARHGEF10LQ9HCE6 1279 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 SAGE1Q9NXZ1 904 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.38□□□□□ -1.07
SMAD1-213ENST00000514778 NYAP2Q9P242 653 aa8.38□□□□□ -1.07
SMAD1-213ENST00000514778 RBM8AQ9Y5S9 174 aaKnown RBP8.38□□□□□ -1.07
SMAD1-213ENST00000514778 DOCK1Q14185 1865 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 TSPY2A6NKD2 308 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 MPHOSPH10O00566 681 aaKnown RBP8.37□□□□□ -1.07
SMAD1-213ENST00000514778 GDF11O95390 407 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 TTLL1O95922 423 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 CYP21A2P08686 494 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 HMGB1P09429 215 aaKnown RBP8.37□□□□□ -1.07
SMAD1-213ENST00000514778 SLURP2P0DP57 97 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 AKR1B1P15121 316 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 GUCY1A2P33402 732 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 GJA5P36382 358 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 HTRA3P83110 453 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 KIF23Q02241 960 aaPredicted RBP8.37□□□□□ -1.07
SMAD1-213ENST00000514778 ICA1Q05084 483 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 CTDSPL2Q05D32 466 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 SPP2Q13103 211 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 PABPC4Q13310 644 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMAD1-213ENST00000514778 RAB3GAP1Q15042 981 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 SLC4A8Q2Y0W8 1093 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 NOM1Q5C9Z4 860 aaKnown RBP8.37□□□□□ -1.07
SMAD1-213ENST00000514778 USP17L2Q6R6M4 530 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 ANKRD23Q86SG2 305 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 IQCA1Q86XH1 822 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 DGKHQ86XP1 1220 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 SPRYD3Q8NCJ5 442 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 SLC44A5Q8NCS7 719 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 IL27Q8NEV9 243 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMAD1-213ENST00000514778 NBPF3Q9H094 633 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 MTMR4Q9NYA4 1195 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 TMX2Q9Y320 296 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 OTOFQ9HC10 1997 aa8.37□□□□□ -1.07
SMAD1-213ENST00000514778 WDR19Q8NEZ3 1342 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 CCL15-CCL14A0A0B4J2E2 113 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms