RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	PRR33	A8MZF0	331 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	GLI1	P08151	1106 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	HMGB1	P09429	215 aa	Known RBP	5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	RAG1	P15918	1043 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	GART	P22102	1010 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	GBP1	P32455	592 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	FAM160A1	Q05DH4	1040 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	APOBR	Q0VD83	1088 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	DUSP4	Q13115	394 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	OXR1	Q8N573	874 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	DTWD2	Q8NBA8	298 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ZNF296	Q8WUU4	475 aa	Predicted RBP	5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	PPP1R16B	Q96T49	567 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	TANGO6	Q9C0B7	1094 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ZSWIM5	Q9P217	1185 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	KLHL3	Q9UH77	587 aa		5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	DDX41	Q9UJV9	622 aa	Known RBP	5.22	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	RGS13	O14921	159 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SRF	P11831	508 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	LTK	P29376	864 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CD96	P40200	585 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CHRNE	Q04844	493 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	COL9A2	Q14055	689 aa	Predicted RBP	5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CLEC16A	Q2KHT3	1053 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	TMEM67	Q5HYA8	995 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CDCP2	Q5VXM1	449 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	OGFOD2	Q6N063	350 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	FBXL19	Q6PCT2	694 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	TSPYL5	Q86VY4	417 aa	Predicted RBP	5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	KIAA0825	Q8IV33	1275 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	RIN3	Q8TB24	985 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	PPP1R13L	Q8WUF5	828 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	KIRREL1	Q96J84	757 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	KREMEN1	Q96MU8	473 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CAPN10	Q9HC96	672 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	DUSP13	Q9UII6	198 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	TMEM59L	Q9UK28	342 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CORIN	Q9Y5Q5	1042 aa		5.21	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	MEIS3P2	A8K0S8	358 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	ATP2B1	P20020	1258 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	TPP2	P29144	1249 aa	Predicted RBP	5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	GAB4	Q2WGN9	574 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	USP48	Q86UV5	1035 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CREG2	Q8IUH2	290 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SPPL2C	Q8IUH8	684 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	KSR1	Q8IVT5	923 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	LILRA2	Q8N149	483 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SPON2	Q9BUD6	331 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	KRTAP9-2	Q9BYQ4	174 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	ACBD3	Q9H3P7	528 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SLAMF8	Q9P0V8	285 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	PCDHB14	Q9Y5E9	798 aa		5.2	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	FITM1	A5D6W6	292 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	GRIN3B	O60391	1043 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	RNF111	Q6ZNA4	994 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	VPS37D	Q86XT2	251 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	PDZD8	Q8NEN9	1154 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	NKD1	Q969G9	470 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	FAM84A	Q96KN4	292 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	DHRS1	Q96LJ7	313 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267		Q96M66	194 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	PUS7	Q96PZ0	661 aa	Known RBP	5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	KRTAP4-12	Q9BQ66	201 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	BRMS1	Q9HCU9	246 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	PRR13	Q9NZ81	148 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	INPP5F	Q9Y2H2	1132 aa		5.19	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	LRRC10B	A6NIK2	292 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SLC22A31	A6NKX4	558 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	BTBD11	A6QL63	1104 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	UPK3BL1	B0FP48	263 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	UPK3BL2	E5RIL1	263 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267		F6X3S4	739 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	ARID5A	Q03989	594 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	EGR3	Q06889	387 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SNX17	Q15036	470 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SOGA3	Q5TF21	947 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	MPZL3	Q6UWV2	235 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	NLRC3	Q7RTR2	1065 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	TTC6	Q86TZ1	520 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SLITRK4	Q8IW52	837 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	FAM177A1	Q8N128	213 aa	Predicted RBP	5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	TAB3	Q8N5C8	712 aa	Predicted RBP	5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	ZNF655	Q8N720	491 aa	Predicted RBP	5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SYTL5	Q8TDW5	730 aa	Predicted RBP	5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CNNM2	Q9H8M5	875 aa		5.18	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CARMIL2	Q6F5E8	1435 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CHURC1-FNTB	B4DL54	471 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	TLR3	O15455	904 aa	Known RBP	5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CLEC3A	O75596	197 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	HPX	P02790	462 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	ESR1	P03372	595 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	MCM4	P33991	863 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	GJA8	P48165	433 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	RACK1	P63244	317 aa	Known RBP	5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	NMI	Q13287	307 aa	Predicted RBP	5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms