RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 MAST2Q6P0Q8 1798 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 NEDD4P46934 1319 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 NID2Q14112 1375 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 YDJCA8MPS7 323 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 WDHD1O75717 1129 aaPredicted RBP11.52□□□□□ -0.57
TPM3-221ENST00000513769 TOMM70O94826 608 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 NOVP48745 357 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 METAP2P50579 478 aaKnown RBP eCLIP11.52□□□□□ -0.57
TPM3-221ENST00000513769 TFAP4Q01664 338 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 ST3GAL1Q11201 340 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 STK3Q13188 491 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 CSPP1Q1MSJ5 1256 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 RRP12Q5JTH9 1297 aaKnown RBP11.52□□□□□ -0.57
TPM3-221ENST00000513769 PADI6Q6TGC4 694 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 CATIPQ7Z7H3 387 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 NSUN7Q8NE18 718 aaKnown RBP11.52□□□□□ -0.57
TPM3-221ENST00000513769 NEDD1Q8NHV4 660 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 DPF2Q92785 391 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 TACC3Q9Y6A5 838 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 FLT1P17948 1338 aa11.52□□□□□ -0.57
TPM3-221ENST00000513769 LAMA4Q16363 1823 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 TSPY2A6NKD2 308 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 CTDNEP1O95476 244 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 HLA-DOAP06340 250 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 IFNAR1P17181 557 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 CDK8P49336 464 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 GNAQP50148 359 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 PLCD1P51178 756 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 CCT2P78371 535 aaKnown RBP11.51□□□□□ -0.57
TPM3-221ENST00000513769 GABPAQ06546 454 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 IFIT1BQ5T764 474 aaKnown RBP11.51□□□□□ -0.57
TPM3-221ENST00000513769 METTL16Q86W50 562 aaKnown RBP11.51□□□□□ -0.57
TPM3-221ENST00000513769 KIAA0825Q8IV33 1275 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 MAPKAPK5Q8IW41 473 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 FAM177A1Q8N128 213 aaPredicted RBP11.51□□□□□ -0.57
TPM3-221ENST00000513769 SERPINB13Q9UIV8 391 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 MTMR6Q9Y217 621 aa11.51□□□□□ -0.57
TPM3-221ENST00000513769 F8W031 263 aaPredicted RBP11.5□□□□□ -0.57
TPM3-221ENST00000513769 FZD9O00144 591 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 DDAH1O94760 285 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 F13A1P00488 732 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 TSPY3P0CV98 308 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 TSPY8P0CW00 308 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 SCNN1DP51172 638 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 RBM5P52756 815 aaKnown RBP eCLIP11.5□□□□□ -0.57
TPM3-221ENST00000513769 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 CXCL9Q07325 125 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 TROAPQ12815 778 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 NTRK3Q16288 839 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 CIAPIN1Q6FI81 312 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 ENAHQ8N8S7 591 aaPredicted RBP11.5□□□□□ -0.57
TPM3-221ENST00000513769 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 LZTS2Q9BRK4 669 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 OSBPL5Q9H0X9 879 aaPredicted RBP11.5□□□□□ -0.57
TPM3-221ENST00000513769 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
TPM3-221ENST00000513769 TNKSO95271 1327 aa11.5□□□□□ -0.57
TPM3-221ENST00000513769 TIAM2Q8IVF5 1701 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 CYP2D7A0A087X1C5 515 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 GOLGA8BA8MQT2 603 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 H3BQV1 296 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 PSMD14O00487 310 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 MYO1BO43795 1136 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 FDPSP14324 419 aaKnown RBP11.49□□□□□ -0.57
TPM3-221ENST00000513769 KIF5BP33176 963 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 ADD1P35611 737 aaKnown RBP11.49□□□□□ -0.57
TPM3-221ENST00000513769 EIF6P56537 245 aaKnown RBP11.49□□□□□ -0.57
TPM3-221ENST00000513769 SSRP1Q08945 709 aaKnown RBP11.49□□□□□ -0.57
TPM3-221ENST00000513769 DLGAP5Q15398 846 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 CFAP100Q494V2 611 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 FAM83AQ86UY5 434 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 TRIM22Q8IYM9 498 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 ZNF654Q8IZM8 581 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 CRACR2BQ8N4Y2 399 aaPredicted RBP11.49□□□□□ -0.57
TPM3-221ENST00000513769 FBXO18Q8NFZ0 1043 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 PRMT6Q96LA8 375 aaPredicted RBP11.49□□□□□ -0.57
TPM3-221ENST00000513769 FAM217BQ9NTX9 383 aaPredicted RBP11.49□□□□□ -0.57
TPM3-221ENST00000513769 TMOD2Q9NZR1 351 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 CFAP45Q9UL16 551 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 NAP1L2Q9ULW6 460 aaPredicted RBP11.49□□□□□ -0.57
TPM3-221ENST00000513769 STK36Q9NRP7 1315 aa11.49□□□□□ -0.57
TPM3-221ENST00000513769 PTPDC1A2A3K4 754 aa11.48□□□□□ -0.57
TPM3-221ENST00000513769 PRPF3O43395 683 aaKnown RBP11.48□□□□□ -0.57
TPM3-221ENST00000513769 XBP1P17861 261 aa11.48□□□□□ -0.57
TPM3-221ENST00000513769 RASA1P20936 1047 aa11.48□□□□□ -0.57
TPM3-221ENST00000513769 KCNC4Q03721 635 aa11.48□□□□□ -0.57
TPM3-221ENST00000513769 PKP1Q13835 747 aa11.48□□□□□ -0.57
TPM3-221ENST00000513769 RTN1Q16799 776 aa11.48□□□□□ -0.57
TPM3-221ENST00000513769 DNAJC5GQ8N7S2 189 aa11.48□□□□□ -0.57
TPM3-221ENST00000513769 MXD3Q9BW11 206 aa11.48□□□□□ -0.57
TPM3-221ENST00000513769 RNF26Q9BY78 433 aaPredicted RBP11.48□□□□□ -0.57
TPM3-221ENST00000513769 SCAND2PQ9GZW5 306 aaPredicted RBP11.48□□□□□ -0.57
TPM3-221ENST00000513769 KAT14Q9H8E8 782 aa11.48□□□□□ -0.57
TPM3-221ENST00000513769 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
TPM3-221ENST00000513769 IL17RBQ9NRM6 502 aa11.48□□□□□ -0.57
TPM3-221ENST00000513769 ORC3Q9UBD5 711 aaPredicted RBP11.48□□□□□ -0.57
TPM3-221ENST00000513769 GOLGA8AA7E2F4 631 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 RNF40O75150 1001 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 PRDM1O75626 825 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 RAD17O75943 681 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms