RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
CAST-239ENST00000513666 TRIM34Q9BYJ4 488 aa11.07□□□□□ -0.64
CAST-239ENST00000513666 NCOR1O75376 2440 aa11.07□□□□□ -0.64
CAST-239ENST00000513666 FLT1P17948 1338 aa11.06□□□□□ -0.64
CAST-239ENST00000513666 BDP1A6H8Y1 2624 aa11.06□□□□□ -0.64
CAST-239ENST00000513666 SEPT4O43236 478 aa11.06□□□□□ -0.64
CAST-239ENST00000513666 BAG3O95817 575 aa11.06□□□□□ -0.64
CAST-239ENST00000513666 ARID4AP29374 1257 aaPredicted RBP11.06□□□□□ -0.64
CAST-239ENST00000513666 EPHB4P54760 987 aa11.06□□□□□ -0.64
CAST-239ENST00000513666 CATSPERGQ6ZRH7 1159 aa11.06□□□□□ -0.64
CAST-239ENST00000513666 MAPKAPK5Q8IW41 473 aa11.06□□□□□ -0.64
CAST-239ENST00000513666 TGFBRAP1Q8WUH2 860 aa11.06□□□□□ -0.64
CAST-239ENST00000513666 BTBD7Q9P203 1132 aa11.06□□□□□ -0.64
CAST-239ENST00000513666 HDAC5Q9UQL6 1122 aa11.06□□□□□ -0.64
CAST-239ENST00000513666 DNAJB2P25686 324 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 ITGB8P26012 769 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 ADCYAP1R1P41586 468 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 USP14P54578 494 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 PPP4CP60510 307 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 TLE2Q04725 743 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 ANO1Q5XXA6 986 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 ATXN2LQ8WWM7 1075 aaKnown RBP11.05□□□□□ -0.64
CAST-239ENST00000513666 FERMT2Q96AC1 680 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 FAM122AQ96E09 287 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 NEUROD6Q96NK8 337 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 FEZ1Q99689 392 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 AATFQ9NY61 560 aaKnown RBP eCLIP11.05□□□□□ -0.64
CAST-239ENST00000513666 LRP2BPQ9P2M1 347 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 PALD1Q9ULE6 856 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 TACC3Q9Y6A5 838 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 ZNF521Q96K83 1311 aa11.05□□□□□ -0.64
CAST-239ENST00000513666 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.04□□□□□ -0.64
CAST-239ENST00000513666 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.04□□□□□ -0.64
CAST-239ENST00000513666 POTEMA6NI47 508 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
CAST-239ENST00000513666 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
CAST-239ENST00000513666 KIAA0355O15063 1070 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 GH2P01242 217 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 HLA-DOAP06340 250 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 CLTBP09497 229 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 VCAM1P19320 739 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 MCAMP43121 646 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 LRRC41Q15345 812 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 ZYXQ15942 572 aaKnown RBP11.04□□□□□ -0.64
CAST-239ENST00000513666 NAA16Q6N069 864 aaPredicted RBP11.04□□□□□ -0.64
CAST-239ENST00000513666 ATF7IPQ6VMQ6 1270 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 DPP9Q86TI2 863 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 KIAA1683Q9H0B3 1180 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 ZNF576Q9H609 170 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.04□□□□□ -0.64
CAST-239ENST00000513666 STRNO43815 780 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 ADORA2AP29274 412 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 FPGSQ05932 587 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 GORABQ5T7V8 394 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 ADAMTS19Q8TE59 1207 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 ASB2Q96Q27 587 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 THEGQ9P2T0 379 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 PHF24Q9UPV7 400 aa11.04□□□□□ -0.64
CAST-239ENST00000513666 RAG1P15918 1043 aa11.03□□□□□ -0.64
CAST-239ENST00000513666 ALDH1L2Q3SY69 923 aa11.03□□□□□ -0.64
CAST-239ENST00000513666 FAM47AQ5JRC9 791 aa11.03□□□□□ -0.64
CAST-239ENST00000513666 AKNAD1Q5T1N1 836 aa11.03□□□□□ -0.64
CAST-239ENST00000513666 TATDN1Q6P1N9 297 aa11.03□□□□□ -0.64
CAST-239ENST00000513666 POTEGQ6S5H5 508 aa11.03□□□□□ -0.64
CAST-239ENST00000513666 ADGRA1Q86SQ6 560 aa11.03□□□□□ -0.64
CAST-239ENST00000513666 TIFAQ96CG3 184 aa11.03□□□□□ -0.64
CAST-239ENST00000513666 GAS2L1Q99501 681 aaPredicted RBP11.03□□□□□ -0.64
CAST-239ENST00000513666 MOV10L1Q9BXT6 1211 aaKnown RBP11.03□□□□□ -0.64
CAST-239ENST00000513666 RPAP3Q9H6T3 665 aaPredicted RBP11.03□□□□□ -0.64
CAST-239ENST00000513666 SAP30BPQ9UHR5 308 aaKnown RBP11.03□□□□□ -0.64
CAST-239ENST00000513666 MYH1P12882 1939 aa11.03□□□□□ -0.64
CAST-239ENST00000513666 COBLO75128 1261 aa11.02□□□□□ -0.65
CAST-239ENST00000513666 UQCRFS1P1P0C7P4 283 aa11.02□□□□□ -0.65
CAST-239ENST00000513666 MAP3K12Q12852 859 aa11.02□□□□□ -0.65
CAST-239ENST00000513666 PRAMEF19Q5SWL8 479 aa11.02□□□□□ -0.65
CAST-239ENST00000513666 SHCBP1Q8NEM2 672 aa11.02□□□□□ -0.65
CAST-239ENST00000513666 ACER1Q8TDN7 264 aa11.02□□□□□ -0.65
CAST-239ENST00000513666 SLC5A4Q9NY91 659 aa11.02□□□□□ -0.65
CAST-239ENST00000513666 SMCHD1A6NHR9 2005 aa11.01□□□□□ -0.65
CAST-239ENST00000513666 A0A0G2JMZ2 1700 aa11.01□□□□□ -0.65
CAST-239ENST00000513666 SRGAP3O43295 1099 aa11.01□□□□□ -0.65
CAST-239ENST00000513666 MRPS5P82675 430 aaKnown RBP11.01□□□□□ -0.65
CAST-239ENST00000513666 MTX1Q13505 466 aa11.01□□□□□ -0.65
CAST-239ENST00000513666 RAB3GAP1Q15042 981 aa11.01□□□□□ -0.65
CAST-239ENST00000513666 PPM1EQ8WY54 764 aa11.01□□□□□ -0.65
CAST-239ENST00000513666 UHRF1Q96T88 793 aaPredicted RBP11.01□□□□□ -0.65
CAST-239ENST00000513666 MEIS3Q99687 375 aa11.01□□□□□ -0.65
CAST-239ENST00000513666 SMC4Q9NTJ3 1288 aa11.01□□□□□ -0.65
CAST-239ENST00000513666 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.01□□□□□ -0.65
CAST-239ENST00000513666 CHD9Q3L8U1 2897 aa11.01□□□□□ -0.65
CAST-239ENST00000513666 MYO9BQ13459 2157 aa11.01□□□□□ -0.65
CAST-239ENST00000513666 MYO5AQ9Y4I1 1855 aaKnown RBP11.01□□□□□ -0.65
CAST-239ENST00000513666 A0A1W2PQ45 241 aaPredicted RBP11□□□□□ -0.65
CAST-239ENST00000513666 A0A1W2PQY0 241 aa11□□□□□ -0.65
CAST-239ENST00000513666 PQBP1O60828 265 aaKnown RBP11□□□□□ -0.65
CAST-239ENST00000513666 IGSF3O75054 1194 aa11□□□□□ -0.65
CAST-239ENST00000513666 ERCC3P19447 782 aa11□□□□□ -0.65
CAST-239ENST00000513666 COG2Q14746 738 aa11□□□□□ -0.65
CAST-239ENST00000513666 ABCB5Q2M3G0 1257 aa11□□□□□ -0.65
CAST-239ENST00000513666 ABRAQ8N0Z2 381 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms