RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ZNF333Q96JL9 665 aa11.57□□□□□ -0.56
RNF4-221ENST00000513643 FEZ1Q99689 392 aa11.57□□□□□ -0.56
RNF4-221ENST00000513643 RPAP3Q9H6T3 665 aaPredicted RBP11.57□□□□□ -0.56
RNF4-221ENST00000513643 MKNK2Q9HBH9 465 aa11.57□□□□□ -0.56
RNF4-221ENST00000513643 ZNF287Q9HBT7 754 aa11.57□□□□□ -0.56
RNF4-221ENST00000513643 MTMR4Q9NYA4 1195 aa11.57□□□□□ -0.56
RNF4-221ENST00000513643 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
RNF4-221ENST00000513643 CCDC85CA6NKD9 419 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 PEX10O60683 326 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 PRDM1O75626 825 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 FMNL1O95466 1100 aaPredicted RBP11.56□□□□□ -0.56
RNF4-221ENST00000513643 HOXD10P28358 340 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 PDE4BQ07343 736 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 COG2Q14746 738 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 ZYXQ15942 572 aaKnown RBP11.56□□□□□ -0.56
RNF4-221ENST00000513643 CENPQQ7L2Z9 268 aaPredicted RBP11.56□□□□□ -0.56
RNF4-221ENST00000513643 DOCK3Q8IZD9 2030 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 ZNF444Q8N0Y2 327 aaPredicted RBP11.56□□□□□ -0.56
RNF4-221ENST00000513643 GPRC5AQ8NFJ5 357 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 USP6NLQ92738 828 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 SH2D4AQ9H788 454 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 ARHGEF10LQ9HCE6 1279 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 INCENPQ9NQS7 918 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 IL17RBQ9NRM6 502 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 GABRQQ9UN88 632 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 TNRC18O15417 2968 aaPredicted RBP11.56□□□□□ -0.56
RNF4-221ENST00000513643 RLFQ13129 1914 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 MYPNQ86TC9 1320 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 ZSWIM8A7E2V4 1837 aa11.56□□□□□ -0.56
RNF4-221ENST00000513643 WDR46O15213 610 aaKnown RBP11.55□□□□□ -0.56
RNF4-221ENST00000513643 CHMLP26374 656 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 DSG3P32926 999 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 MFAP1P55081 439 aaKnown RBP11.55□□□□□ -0.56
RNF4-221ENST00000513643 ERVK-9P63128 1117 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 ERVK-24P63145 666 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 PRKCZQ05513 592 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 CTDSPL2Q05D32 466 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 CWC27Q6UX04 472 aaKnown RBP11.55□□□□□ -0.56
RNF4-221ENST00000513643 NKX2-3Q8TAU0 364 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 PXYLP1Q8TE99 480 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 CEP95Q96GE4 821 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 DSCC1Q9BVC3 393 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 TCP11L1Q9NUJ3 509 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 HOXC10Q9NYD6 342 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 BTBD7Q9P203 1132 aa11.55□□□□□ -0.56
RNF4-221ENST00000513643 F5H6K3 240 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 CAPN15O75808 1086 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 IGHA2P01877 340 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 SLC3A2P08195 630 aaKnown RBP11.54□□□□□ -0.56
RNF4-221ENST00000513643 PCP11498 1178 aaKnown RBP11.54□□□□□ -0.56
RNF4-221ENST00000513643 FLT3LGP49771 235 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 TFAP4Q01664 338 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 KLRC3Q07444 240 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 MORN1Q5T089 497 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 STK11IPQ8N1F8 1099 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 GMCL1P1Q8NEA9 526 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 REPS2Q8NFH8 660 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 STAG1Q8WVM7 1258 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 PORCNQ9H237 461 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 DIAPH3Q9NSV4 1193 aa11.54□□□□□ -0.56
RNF4-221ENST00000513643 TNPO2O14787 897 aaKnown RBP11.53□□□□□ -0.56
RNF4-221ENST00000513643 TTLL1O95922 423 aa11.53□□□□□ -0.56
RNF4-221ENST00000513643 NDUFB10O96000 172 aa11.53□□□□□ -0.56
RNF4-221ENST00000513643 MAPK4P31152 587 aa11.53□□□□□ -0.56
RNF4-221ENST00000513643 NT5C2P49902 561 aa11.53□□□□□ -0.56
RNF4-221ENST00000513643 FAM47AQ5JRC9 791 aa11.53□□□□□ -0.56
RNF4-221ENST00000513643 SPICE1Q8N0Z3 855 aa11.53□□□□□ -0.56
RNF4-221ENST00000513643 MB21D1Q8N884 522 aa11.53□□□□□ -0.56
RNF4-221ENST00000513643 CLIP2Q9UDT6 1046 aa11.53□□□□□ -0.56
RNF4-221ENST00000513643 RAD50Q92878 1312 aa11.53□□□□□ -0.56
RNF4-221ENST00000513643 SGSM2O43147 1006 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 TSPY3P0CV98 308 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 TSPY8P0CW00 308 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 XRCC5P13010 732 aaKnown RBP11.52□□□□□ -0.57
RNF4-221ENST00000513643 GRK4P32298 578 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 SLC9C1Q4G0N8 1177 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 AKNAD1Q5T1N1 836 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 RCSD1Q6JBY9 416 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 NBPF11Q86T75 865 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 TBC1D10CQ8IV04 446 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 SLAIN1Q8ND83 568 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 COA7Q96BR5 231 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 GOPCQ9HD26 462 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 PPP1R9AQ9ULJ8 1098 aa11.52□□□□□ -0.57
RNF4-221ENST00000513643 MGAMO43451 1857 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 MYH8P13535 1937 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 NMT2O60551 498 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 PLA2G6O60733 806 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 HOXC6P09630 235 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 BMP2KLQ5H9B9 411 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 PPP4R3BQ5MIZ7 849 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 FAM83BQ5T0W9 1011 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 GPR142Q7Z601 462 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 SHCBP1Q8NEM2 672 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 RAET1EQ8TD07 263 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 SH3TC2Q8TF17 1288 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 ANKS1AQ92625 1134 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 ATG4CQ96DT6 458 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 GMCL1Q96IK5 515 aa11.51□□□□□ -0.57
RNF4-221ENST00000513643 MOV10L1Q9BXT6 1211 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms