RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 EMILIN3Q9NT22 766 aa19.39■□□□□ 0.69
HMGCL-209ENST00000513148 ZSWIM5Q9P217 1185 aa19.39■□□□□ 0.69
HMGCL-209ENST00000513148 TRPA1O75762 1119 aa19.38■□□□□ 0.69
HMGCL-209ENST00000513148 SEC24BO95487 1268 aa19.38■□□□□ 0.69
HMGCL-209ENST00000513148 SH3D19Q5HYK7 790 aa19.38■□□□□ 0.69
HMGCL-209ENST00000513148 SPICE1Q8N0Z3 855 aa19.38■□□□□ 0.69
HMGCL-209ENST00000513148 PROCA1Q8NCQ7 364 aaPredicted RBP19.38■□□□□ 0.69
HMGCL-209ENST00000513148 CHMP4CQ96CF2 233 aa19.38■□□□□ 0.69
HMGCL-209ENST00000513148 NYAP2Q9P242 653 aa19.38■□□□□ 0.69
HMGCL-209ENST00000513148 TMX2Q9Y320 296 aa19.38■□□□□ 0.69
HMGCL-209ENST00000513148 PDHXO00330 501 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 ZKSCAN1P17029 563 aaPredicted RBP19.37■□□□□ 0.69
HMGCL-209ENST00000513148 HSPA4P34932 840 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 USP14P54578 494 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 OTUD7BQ6GQQ9 843 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 GPAT2Q6NUI2 795 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 CYB5R4Q7L1T6 521 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 CHST3Q7LGC8 479 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 USP26Q9BXU7 913 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 RNF186Q9NXI6 227 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 TSKSQ9UJT2 592 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 KIAA1755Q5JYT7 1200 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 IQCA1Q86XH1 822 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 WBP1LQ9NX94 342 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 AGTPBP1Q9UPW5 1226 aa19.37■□□□□ 0.69
HMGCL-209ENST00000513148 VCAM1P19320 739 aa19.36■□□□□ 0.69
HMGCL-209ENST00000513148 COL9A3Q14050 684 aaPredicted RBP19.36■□□□□ 0.69
HMGCL-209ENST00000513148 ANKRD23Q86SG2 305 aa19.36■□□□□ 0.69
HMGCL-209ENST00000513148 UBAC1Q9BSL1 405 aa19.36■□□□□ 0.69
HMGCL-209ENST00000513148 MTMR7Q9Y216 660 aa19.36■□□□□ 0.69
HMGCL-209ENST00000513148 TAF1CQ15572 869 aaPredicted RBP19.35■□□□□ 0.69
HMGCL-209ENST00000513148 ADCK5Q3MIX3 580 aa19.35■□□□□ 0.69
HMGCL-209ENST00000513148 VCPKMTQ9H867 229 aa19.35■□□□□ 0.69
HMGCL-209ENST00000513148 GOPCQ9HD26 462 aa19.35■□□□□ 0.69
HMGCL-209ENST00000513148 TNKSO95271 1327 aa19.35■□□□□ 0.69
HMGCL-209ENST00000513148 GOLGA6L3A6NEY3 463 aa19.35■□□□□ 0.69
HMGCL-209ENST00000513148 HSPA1AP0DMV8 641 aaKnown RBP19.35■□□□□ 0.69
HMGCL-209ENST00000513148 HSPA1BP0DMV9 641 aaKnown RBP19.35■□□□□ 0.69
HMGCL-209ENST00000513148 ZSCAN10Q96SZ4 725 aaPredicted RBP19.35■□□□□ 0.69
HMGCL-209ENST00000513148 TCP11L1Q9NUJ3 509 aa19.35■□□□□ 0.69
HMGCL-209ENST00000513148 TBC1D8O95759 1140 aa19.34■□□□□ 0.69
HMGCL-209ENST00000513148 ALDH1A1P00352 501 aa19.34■□□□□ 0.69
HMGCL-209ENST00000513148 CYP2C8P10632 490 aa19.34■□□□□ 0.69
HMGCL-209ENST00000513148 MCCP23508 829 aa19.34■□□□□ 0.69
HMGCL-209ENST00000513148 MB21D2Q8IYB1 491 aaPredicted RBP19.34■□□□□ 0.69
HMGCL-209ENST00000513148 C12orf42Q96LP6 360 aa19.34■□□□□ 0.69
HMGCL-209ENST00000513148 SNX14Q9Y5W7 946 aa19.34■□□□□ 0.69
HMGCL-209ENST00000513148 CRHR2Q13324 411 aa19.34■□□□□ 0.69
HMGCL-209ENST00000513148 PPP4R3BQ5MIZ7 849 aa19.34■□□□□ 0.69
HMGCL-209ENST00000513148 RCSD1Q6JBY9 416 aa19.34■□□□□ 0.69
HMGCL-209ENST00000513148 NAP1L5Q96NT1 182 aaPredicted RBP19.34■□□□□ 0.69
HMGCL-209ENST00000513148 RPAP3Q9H6T3 665 aaPredicted RBP19.34■□□□□ 0.69
HMGCL-209ENST00000513148 F5H6K3 240 aa19.33■□□□□ 0.68
HMGCL-209ENST00000513148 EPB41L2O43491 1005 aaKnown RBP19.33■□□□□ 0.68
HMGCL-209ENST00000513148 NT5C2P49902 561 aa19.33■□□□□ 0.68
HMGCL-209ENST00000513148 ANTXR2P58335 489 aa19.33■□□□□ 0.68
HMGCL-209ENST00000513148 KLRC3Q07444 240 aa19.33■□□□□ 0.68
HMGCL-209ENST00000513148 RASGRP2Q7LDG7 609 aa19.33■□□□□ 0.68
HMGCL-209ENST00000513148 ENAHQ8N8S7 591 aaPredicted RBP19.33■□□□□ 0.68
HMGCL-209ENST00000513148 NEK1Q96PY6 1258 aa19.33■□□□□ 0.68
HMGCL-209ENST00000513148 NUP88Q99567 741 aaPredicted RBP19.33■□□□□ 0.68
HMGCL-209ENST00000513148 TMEM47Q9BQJ4 181 aa19.33■□□□□ 0.68
HMGCL-209ENST00000513148 TANGO6Q9C0B7 1094 aa19.33■□□□□ 0.68
HMGCL-209ENST00000513148 NDUFB10O96000 172 aa19.32■□□□□ 0.68
HMGCL-209ENST00000513148 XRCC6P12956 609 aaKnown RBP eCLIP19.32■□□□□ 0.68
HMGCL-209ENST00000513148 SAMD1Q6SPF0 538 aaPredicted RBP19.32■□□□□ 0.68
HMGCL-209ENST00000513148 LPAR1Q92633 364 aa19.32■□□□□ 0.68
HMGCL-209ENST00000513148 MKL1Q969V6 931 aa19.32■□□□□ 0.68
HMGCL-209ENST00000513148 R3HDMLQ9H3Y0 253 aa19.32■□□□□ 0.68
HMGCL-209ENST00000513148 IFIT3O14879 490 aaKnown RBP19.32■□□□□ 0.68
HMGCL-209ENST00000513148 IRX3P78415 501 aaPredicted RBP19.32■□□□□ 0.68
HMGCL-209ENST00000513148 PABPC4Q13310 644 aaKnown RBP eCLIP19.32■□□□□ 0.68
HMGCL-209ENST00000513148 KRT32Q14532 448 aa19.32■□□□□ 0.68
HMGCL-209ENST00000513148 TSGA10IPQ3SY00 556 aa19.32■□□□□ 0.68
HMGCL-209ENST00000513148 KCNB2Q92953 911 aa19.32■□□□□ 0.68
HMGCL-209ENST00000513148 JAKMIP1Q96N16 626 aaKnown RBP19.32■□□□□ 0.68
HMGCL-209ENST00000513148 ASCC2Q9H1I8 757 aaPredicted RBP19.32■□□□□ 0.68
HMGCL-209ENST00000513148 FOXN1O15353 648 aa19.31■□□□□ 0.68
HMGCL-209ENST00000513148 CA12O43570 354 aa19.31■□□□□ 0.68
HMGCL-209ENST00000513148 PRC1O43663 620 aa19.31■□□□□ 0.68
HMGCL-209ENST00000513148 TOP1P11387 765 aaKnown RBP19.31■□□□□ 0.68
HMGCL-209ENST00000513148 MCM5P33992 734 aa19.31■□□□□ 0.68
HMGCL-209ENST00000513148 NOVP48745 357 aa19.31■□□□□ 0.68
HMGCL-209ENST00000513148 FAM83BQ5T0W9 1011 aa19.31■□□□□ 0.68
HMGCL-209ENST00000513148 SMCR8Q8TEV9 937 aaPredicted RBP19.31■□□□□ 0.68
HMGCL-209ENST00000513148 TCEANC2Q96MN5 208 aa19.31■□□□□ 0.68
HMGCL-209ENST00000513148 PARK7Q99497 189 aaKnown RBP19.31■□□□□ 0.68
HMGCL-209ENST00000513148 LRRC2Q9BYS8 371 aa19.31■□□□□ 0.68
HMGCL-209ENST00000513148 ZFYVE28Q9HCC9 887 aa19.31■□□□□ 0.68
HMGCL-209ENST00000513148 ZCCHC17Q9NP64 241 aaKnown RBP19.31■□□□□ 0.68
HMGCL-209ENST00000513148 SAGE1Q9NXZ1 904 aa19.31■□□□□ 0.68
HMGCL-209ENST00000513148 ERICH2A1L162 156 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 TPM2P07951 284 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 CPA1P15085 419 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 OSBPP22059 807 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 MRE11P49959 708 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 SART3Q15020 963 aaKnown RBP19.3■□□□□ 0.68
HMGCL-209ENST00000513148 CCDC178Q5BJE1 867 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 IFIT1BQ5T764 474 aaKnown RBP19.3■□□□□ 0.68
HMGCL-209ENST00000513148 SLFN13Q68D06 897 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms