RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ARHGEF10LQ9HCE6 1279 aa14.67□□□□□ -0.06
PDPN-210ENST00000513143 SLC12A7Q9Y666 1083 aa14.67□□□□□ -0.06
PDPN-210ENST00000513143 A0A1W2PRG0 241 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 PDIA3P30101 505 aaKnown RBP14.66□□□□□ -0.06
PDPN-210ENST00000513143 ANP32AP39687 249 aaKnown RBP14.66□□□□□ -0.06
PDPN-210ENST00000513143 RCAN1P53805 252 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 ATP2B2Q01814 1243 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 TROAPQ12815 778 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 ME3Q16798 604 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 CATIPQ7Z7H3 387 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 CCDC84Q86UT8 332 aaPredicted RBP14.66□□□□□ -0.06
PDPN-210ENST00000513143 ZNF654Q8IZM8 581 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 LRRC47Q8N1G4 583 aaKnown RBP14.66□□□□□ -0.06
PDPN-210ENST00000513143 PNMA1Q8ND90 353 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 ACER1Q8TDN7 264 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 CLMNQ96JQ2 1002 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 AS3MTQ9HBK9 375 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 TMX2Q9Y320 296 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 SPDYE5A6NIY4 337 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 K7ELQ4 463 aaPredicted RBP14.66□□□□□ -0.06
PDPN-210ENST00000513143 ZBTB43O43298 467 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 DDAH1O94760 285 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 LARGE1O95461 756 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 CALM1P0DP23 149 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 CALM2P0DP24 149 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 CALM3P0DP25 149 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 ECE1P42892 770 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 SYNE3Q6ZMZ3 975 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 ERO1BQ86YB8 467 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 HSCBQ8IWL3 235 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 SP7Q8TDD2 431 aaPredicted RBP14.66□□□□□ -0.06
PDPN-210ENST00000513143 TMX3Q96JJ7 454 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 MAP3K14Q99558 947 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 SH2D4AQ9H788 454 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 ELP3Q9H9T3 547 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 SH2B1Q9NRF2 756 aaPredicted RBP14.66□□□□□ -0.06
PDPN-210ENST00000513143 HPS5Q9UPZ3 1129 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 AFG3L2Q9Y4W6 797 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 ZHX2Q9Y6X8 837 aa14.66□□□□□ -0.06
PDPN-210ENST00000513143 PTPRFP10586 1907 aa14.65□□□□□ -0.06
PDPN-210ENST00000513143 NID2Q14112 1375 aa14.65□□□□□ -0.06
PDPN-210ENST00000513143 USP17L10C9JJH3 530 aa14.65□□□□□ -0.06
PDPN-210ENST00000513143 PFKFB2O60825 505 aa14.65□□□□□ -0.06
PDPN-210ENST00000513143 PPATQ06203 517 aa14.65□□□□□ -0.06
PDPN-210ENST00000513143 ZNF280CQ8ND82 737 aa14.65□□□□□ -0.06
PDPN-210ENST00000513143 GMCL1P1Q8NEA9 526 aa14.65□□□□□ -0.06
PDPN-210ENST00000513143 SLC10A4Q96EP9 437 aa14.65□□□□□ -0.06
PDPN-210ENST00000513143 MYL10Q9BUA6 226 aa14.65□□□□□ -0.06
PDPN-210ENST00000513143 KIAA1683Q9H0B3 1180 aa14.65□□□□□ -0.06
PDPN-210ENST00000513143 SLKQ9H2G2 1235 aaPredicted RBP14.65□□□□□ -0.06
PDPN-210ENST00000513143 GOLGA8BA8MQT2 603 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 F5H6K3 240 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 SNHG28P0DPA3 235 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 PDHBP11177 359 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 KLRC3Q07444 240 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 SPP2Q13103 211 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 BECN1Q14457 450 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 PPP2R5BQ15173 497 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 MICU3Q86XE3 530 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 FANCBQ8NB91 859 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 NUP133Q8WUM0 1156 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 VCPKMTQ9H867 229 aa14.64□□□□□ -0.07
PDPN-210ENST00000513143 NAP1L2Q9ULW6 460 aaPredicted RBP14.64□□□□□ -0.07
PDPN-210ENST00000513143 C19orf81C9J6K1 198 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 RXRAP19793 462 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 METAP2P50579 478 aaKnown RBP eCLIP14.63□□□□□ -0.07
PDPN-210ENST00000513143 BACE1P56817 501 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 SCRN1Q12765 414 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 STK3Q13188 491 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 PPIL2Q13356 520 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 GRM4Q14833 912 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 SLFN13Q68D06 897 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 SAPCD2Q86UD0 394 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 RAB11FIP4Q86YS3 637 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 GTF3C6Q969F1 213 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 GMCL1Q96IK5 515 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 FEZ1Q99689 392 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 GOPCQ9HD26 462 aa14.63□□□□□ -0.07
PDPN-210ENST00000513143 FAM217BQ9NTX9 383 aaPredicted RBP14.63□□□□□ -0.07
PDPN-210ENST00000513143 TRIM75PA6NK02 468 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 TMEM88BA6NKF7 163 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 GOLGA8AA7E2F4 631 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 CXCL11O14625 94 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 NDUFB10O96000 172 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 USP14P54578 494 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 HUNKP57058 714 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 CCT2P78371 535 aaKnown RBP14.62□□□□□ -0.07
PDPN-210ENST00000513143 ST3GAL1Q11201 340 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 MTMR2Q13614 643 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 CUL4AQ13619 759 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 RTN1Q16799 776 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 SH3D19Q5HYK7 790 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 KIAA1755Q5JYT7 1200 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 NECAB1Q8N987 351 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 DCAF4Q8WV16 495 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 OPTNQ96CV9 577 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 OTUD5Q96G74 571 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 KCNH4Q9UQ05 1017 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 MTMR7Q9Y216 660 aa14.62□□□□□ -0.07
PDPN-210ENST00000513143 TLL2Q9Y6L7 1015 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms