RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 RPAP3Q9H6T3 665 aaPredicted RBP20.55■□□□□ 0.88
DDR1-270ENST00000513043 E7EWF7 191 aa20.54■□□□□ 0.88
DDR1-270ENST00000513043 IRX3P78415 501 aaPredicted RBP20.54■□□□□ 0.88
DDR1-270ENST00000513043 PABPC4Q13310 644 aaKnown RBP eCLIP20.54■□□□□ 0.88
DDR1-270ENST00000513043 CFHR5Q9BXR6 569 aa20.54■□□□□ 0.88
DDR1-270ENST00000513043 KRT23Q9C075 422 aa20.54■□□□□ 0.88
DDR1-270ENST00000513043 ASCC2Q9H1I8 757 aaPredicted RBP20.54■□□□□ 0.88
DDR1-270ENST00000513043 CNNM2Q9H8M5 875 aa20.54■□□□□ 0.88
DDR1-270ENST00000513043 GOPCQ9HD26 462 aa20.54■□□□□ 0.88
DDR1-270ENST00000513043 CPA4Q9UI42 421 aa20.54■□□□□ 0.88
DDR1-270ENST00000513043 SLC45A1Q9Y2W3 748 aa20.54■□□□□ 0.88
DDR1-270ENST00000513043 GPR25O00155 361 aa20.53■□□□□ 0.88
DDR1-270ENST00000513043 OSBPP22059 807 aa20.53■□□□□ 0.88
DDR1-270ENST00000513043 TRDNQ13061 729 aa20.53■□□□□ 0.88
DDR1-270ENST00000513043 NECTIN1Q15223 517 aa20.53■□□□□ 0.88
DDR1-270ENST00000513043 SMCR8Q8TEV9 937 aaPredicted RBP20.53■□□□□ 0.88
DDR1-270ENST00000513043 PNMA3Q9UL41 463 aa20.53■□□□□ 0.88
DDR1-270ENST00000513043 TLR2O60603 784 aa20.52■□□□□ 0.88
DDR1-270ENST00000513043 CAPN15O75808 1086 aa20.52■□□□□ 0.88
DDR1-270ENST00000513043 ECM2O94769 699 aaPredicted RBP20.52■□□□□ 0.88
DDR1-270ENST00000513043 REC8O95072 547 aa20.52■□□□□ 0.88
DDR1-270ENST00000513043 SAMD1Q6SPF0 538 aaPredicted RBP20.52■□□□□ 0.88
DDR1-270ENST00000513043 RALYLQ86SE5 291 aaKnown RBP20.52■□□□□ 0.88
DDR1-270ENST00000513043 NUP88Q99567 741 aaPredicted RBP20.52■□□□□ 0.88
DDR1-270ENST00000513043 TANGO6Q9C0B7 1094 aa20.52■□□□□ 0.88
DDR1-270ENST00000513043 ZSWIM5Q9P217 1185 aa20.52■□□□□ 0.88
DDR1-270ENST00000513043 MTMR7Q9Y216 660 aa20.52■□□□□ 0.88
DDR1-270ENST00000513043 USP17L15C9J2P7 530 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 USP17L13C9JLJ4 530 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 USP17L11C9JVI0 530 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 USP17L18D6R9N7 530 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 USP17L22D6RA61 530 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 USP17L17D6RBQ6 530 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 USP17L19D6RCP7 530 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 USP17L20D6RJB6 530 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 F5H6K3 240 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 NDUFB10O96000 172 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 HOXA7P31268 230 aaPredicted RBP20.51■□□□□ 0.87
DDR1-270ENST00000513043 KLRC3Q07444 240 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 USP17L24Q0WX57 530 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 CYB5R4Q7L1T6 521 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 NCOA7Q8NI08 942 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 ZNF296Q8WUU4 475 aaPredicted RBP20.51■□□□□ 0.87
DDR1-270ENST00000513043 LPAR1Q92633 364 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 MKL1Q969V6 931 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 P2RX7Q99572 595 aaKnown RBP20.51■□□□□ 0.87
DDR1-270ENST00000513043 TCP11L1Q9NUJ3 509 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 MYH4Q9Y623 1939 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 ADGRA2Q96PE1 1338 aa20.51■□□□□ 0.87
DDR1-270ENST00000513043 PPP4R3BQ5MIZ7 849 aa20.5■□□□□ 0.87
DDR1-270ENST00000513043 FAM83BQ5T0W9 1011 aa20.5■□□□□ 0.87
DDR1-270ENST00000513043 RNF20Q5VTR2 975 aa20.5■□□□□ 0.87
DDR1-270ENST00000513043 CATSPERGQ6ZRH7 1159 aa20.5■□□□□ 0.87
DDR1-270ENST00000513043 CHST3Q7LGC8 479 aa20.5■□□□□ 0.87
DDR1-270ENST00000513043 IQCA1Q86XH1 822 aa20.5■□□□□ 0.87
DDR1-270ENST00000513043 ISY1Q9ULR0 285 aaKnown RBP20.5■□□□□ 0.87
DDR1-270ENST00000513043 WDR46O15213 610 aaKnown RBP20.49■□□□□ 0.87
DDR1-270ENST00000513043 PEX10O60683 326 aa20.49■□□□□ 0.87
DDR1-270ENST00000513043 FKTNO75072 461 aa20.49■□□□□ 0.87
DDR1-270ENST00000513043 SLFN13Q68D06 897 aa20.49■□□□□ 0.87
DDR1-270ENST00000513043 RCSD1Q6JBY9 416 aa20.49■□□□□ 0.87
DDR1-270ENST00000513043 C17orf99Q6UX52 265 aa20.49■□□□□ 0.87
DDR1-270ENST00000513043 RASGRP2Q7LDG7 609 aa20.49■□□□□ 0.87
DDR1-270ENST00000513043 RASEFQ8IZ41 740 aa20.49■□□□□ 0.87
DDR1-270ENST00000513043 ANKRD13CQ8N6S4 541 aa20.49■□□□□ 0.87
DDR1-270ENST00000513043 ZSCAN10Q96SZ4 725 aaPredicted RBP20.49■□□□□ 0.87
DDR1-270ENST00000513043 TMEM47Q9BQJ4 181 aa20.49■□□□□ 0.87
DDR1-270ENST00000513043 UBAC1Q9BSL1 405 aa20.49■□□□□ 0.87
DDR1-270ENST00000513043 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
DDR1-270ENST00000513043 HERVK_113P62684 666 aa20.48■□□□□ 0.87
DDR1-270ENST00000513043 COL9A3Q14050 684 aaPredicted RBP20.48■□□□□ 0.87
DDR1-270ENST00000513043 FBXO28Q9NVF7 368 aa20.48■□□□□ 0.87
DDR1-270ENST00000513043 TNKSO95271 1327 aa20.48■□□□□ 0.87
DDR1-270ENST00000513043 CASP8AP2Q9UKL3 1982 aa20.47■□□□□ 0.87
DDR1-270ENST00000513043 FLOT1O75955 427 aa20.47■□□□□ 0.87
DDR1-270ENST00000513043 NOVP48745 357 aa20.47■□□□□ 0.87
DDR1-270ENST00000513043 SP3Q02447 781 aa20.47■□□□□ 0.87
DDR1-270ENST00000513043 ENAHQ8N8S7 591 aaPredicted RBP20.47■□□□□ 0.87
DDR1-270ENST00000513043 GMCL1P1Q8NEA9 526 aa20.47■□□□□ 0.87
DDR1-270ENST00000513043 CD99L2Q8TCZ2 262 aa20.47■□□□□ 0.87
DDR1-270ENST00000513043 PAGR1Q9BTK6 254 aa20.47■□□□□ 0.87
DDR1-270ENST00000513043 BCRP11274 1271 aa20.46■□□□□ 0.87
DDR1-270ENST00000513043 ZKSCAN1P17029 563 aaPredicted RBP20.46■□□□□ 0.87
DDR1-270ENST00000513043 MCCP23508 829 aa20.46■□□□□ 0.87
DDR1-270ENST00000513043 NT5C2P49902 561 aa20.46■□□□□ 0.87
DDR1-270ENST00000513043 ANTXR2P58335 489 aa20.46■□□□□ 0.87
DDR1-270ENST00000513043 NOM1Q5C9Z4 860 aaKnown RBP20.46■□□□□ 0.87
DDR1-270ENST00000513043 MB21D2Q8IYB1 491 aaPredicted RBP20.46■□□□□ 0.87
DDR1-270ENST00000513043 TTC14Q96N46 770 aa20.46■□□□□ 0.87
DDR1-270ENST00000513043 SYNPO2Q9UMS6 1093 aa20.46■□□□□ 0.87
DDR1-270ENST00000513043 SPDYE16A6NNV3 312 aaPredicted RBP20.45■□□□□ 0.86
DDR1-270ENST00000513043 IFIT3O14879 490 aaKnown RBP20.45■□□□□ 0.86
DDR1-270ENST00000513043 HSPA4P34932 840 aa20.45■□□□□ 0.86
DDR1-270ENST00000513043 SLC1A4P43007 532 aa20.45■□□□□ 0.86
DDR1-270ENST00000513043 GCLCP48506 637 aaPredicted RBP20.45■□□□□ 0.86
DDR1-270ENST00000513043 COG2Q14746 738 aa20.45■□□□□ 0.86
DDR1-270ENST00000513043 ADCK5Q3MIX3 580 aa20.45■□□□□ 0.86
DDR1-270ENST00000513043 CCDC178Q5BJE1 867 aa20.45■□□□□ 0.86
DDR1-270ENST00000513043 DGKHQ86XP1 1220 aa20.45■□□□□ 0.86
DDR1-270ENST00000513043 USP26Q9BXU7 913 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms