RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 FAM196BA6NMK8 535 aa15.39■□□□□ 0.05
SDHA-215ENST00000512962 LRRC26Q2I0M4 334 aa15.39■□□□□ 0.05
SDHA-215ENST00000512962 BLOC1S3Q6QNY0 202 aa15.39■□□□□ 0.05
SDHA-215ENST00000512962 RNF19BQ6ZMZ0 732 aa15.39■□□□□ 0.05
SDHA-215ENST00000512962 COA7Q96BR5 231 aa15.39■□□□□ 0.05
SDHA-215ENST00000512962 CALR3Q96L12 384 aaKnown RBP15.39■□□□□ 0.05
SDHA-215ENST00000512962 DDX4Q9NQI0 724 aaKnown RBP15.39■□□□□ 0.05
SDHA-215ENST00000512962 AGTPBP1Q9UPW5 1226 aa15.39■□□□□ 0.05
SDHA-215ENST00000512962 COL6A1P12109 1028 aa15.38■□□□□ 0.05
SDHA-215ENST00000512962 FAM110CQ1W6H9 321 aa15.38■□□□□ 0.05
SDHA-215ENST00000512962 MAP3K21Q5TCX8 1036 aa15.38■□□□□ 0.05
SDHA-215ENST00000512962 SLC4A10Q6U841 1118 aa15.38■□□□□ 0.05
SDHA-215ENST00000512962 TSR3Q9UJK0 312 aaKnown RBP15.38■□□□□ 0.05
SDHA-215ENST00000512962 UTYO14607 1347 aa15.38■□□□□ 0.05
SDHA-215ENST00000512962 IL16Q14005 1332 aa15.38■□□□□ 0.05
SDHA-215ENST00000512962 ALDH1L1O75891 902 aa15.37■□□□□ 0.05
SDHA-215ENST00000512962 MAP3K10Q02779 954 aa15.37■□□□□ 0.05
SDHA-215ENST00000512962 PICK1Q9NRD5 415 aa15.37■□□□□ 0.05
SDHA-215ENST00000512962 MUC3AQ02505 3323 aa15.37■□□□□ 0.05
SDHA-215ENST00000512962 KIF16BQ96L93 1317 aa15.37■□□□□ 0.05
SDHA-215ENST00000512962 CAPN2P17655 700 aa15.36■□□□□ 0.05
SDHA-215ENST00000512962 RRP1BQ14684 758 aaKnown RBP15.36■□□□□ 0.05
SDHA-215ENST00000512962 NR6A1Q15406 480 aa15.36■□□□□ 0.05
SDHA-215ENST00000512962 DESI1Q6ICB0 168 aa15.36■□□□□ 0.05
SDHA-215ENST00000512962 WNT2BQ93097 391 aa15.36■□□□□ 0.05
SDHA-215ENST00000512962 SRCIN1Q9C0H9 1055 aa15.36■□□□□ 0.05
SDHA-215ENST00000512962 PUM3Q15397 648 aaKnown RBP15.35■□□□□ 0.05
SDHA-215ENST00000512962 WDR66Q8TBY9 1149 aa15.35■□□□□ 0.05
SDHA-215ENST00000512962 IDI2Q9BXS1 227 aa15.35■□□□□ 0.05
SDHA-215ENST00000512962 PRDM6Q9NQX0 595 aa15.35■□□□□ 0.05
SDHA-215ENST00000512962 RAPGEFL1Q9UHV5 662 aa15.35■□□□□ 0.05
SDHA-215ENST00000512962 CYP2B6P20813 491 aa15.34■□□□□ 0.05
SDHA-215ENST00000512962 CCND3P30281 292 aaPredicted RBP15.34■□□□□ 0.05
SDHA-215ENST00000512962 RFX5P48382 616 aaPredicted RBP15.34■□□□□ 0.05
SDHA-215ENST00000512962 FAM109BQ6ICB4 259 aaPredicted RBP15.34■□□□□ 0.05
SDHA-215ENST00000512962 GAKO14976 1311 aa15.34■□□□□ 0.05
SDHA-215ENST00000512962 ENTPD3O75355 529 aa15.33■□□□□ 0.04
SDHA-215ENST00000512962 HMGCS2P54868 508 aa15.33■□□□□ 0.04
SDHA-215ENST00000512962 CCL14Q16627 93 aa15.33■□□□□ 0.04
SDHA-215ENST00000512962 BRICD5Q6PL45 260 aa15.33■□□□□ 0.04
SDHA-215ENST00000512962 ATG9AQ7Z3C6 839 aa15.33■□□□□ 0.04
SDHA-215ENST00000512962 ADAMTS19Q8TE59 1207 aa15.33■□□□□ 0.04
SDHA-215ENST00000512962 CDX2Q99626 313 aaPredicted RBP15.33■□□□□ 0.04
SDHA-215ENST00000512962 USB1Q9BQ65 265 aaKnown RBP15.33■□□□□ 0.04
SDHA-215ENST00000512962 ASCC2Q9H1I8 757 aaPredicted RBP15.33■□□□□ 0.04
SDHA-215ENST00000512962 SALL2Q9Y467 1007 aaPredicted RBP15.33■□□□□ 0.04
SDHA-215ENST00000512962 LRRFIP2Q9Y608 721 aaKnown RBP15.33■□□□□ 0.04
SDHA-215ENST00000512962 RLFQ13129 1914 aa15.33■□□□□ 0.04
SDHA-215ENST00000512962 CDK5RAP2Q96SN8 1893 aa15.32■□□□□ 0.04
SDHA-215ENST00000512962 CTNND1O60716 968 aaKnown RBP15.32■□□□□ 0.04
SDHA-215ENST00000512962 LDHBP07195 334 aaKnown RBP15.32■□□□□ 0.04
SDHA-215ENST00000512962 IFIT1P09914 478 aaKnown RBP15.32■□□□□ 0.04
SDHA-215ENST00000512962 CACNB2Q08289 660 aaPredicted RBP15.32■□□□□ 0.04
SDHA-215ENST00000512962 VAC14Q08AM6 782 aa15.32■□□□□ 0.04
SDHA-215ENST00000512962 SPP2Q13103 211 aa15.32■□□□□ 0.04
SDHA-215ENST00000512962 PICALMQ13492 652 aa15.32■□□□□ 0.04
SDHA-215ENST00000512962 ZSCAN29Q8IWY8 852 aaPredicted RBP15.32■□□□□ 0.04
SDHA-215ENST00000512962 TXNRD2Q9NNW7 524 aa15.32■□□□□ 0.04
SDHA-215ENST00000512962 PCDHB3Q9Y5E6 796 aa15.32■□□□□ 0.04
SDHA-215ENST00000512962 ZEB1P37275 1124 aaPredicted RBP15.31■□□□□ 0.04
SDHA-215ENST00000512962 PHKA1P46020 1223 aa15.31■□□□□ 0.04
SDHA-215ENST00000512962 SHROOM1Q2M3G4 852 aaPredicted RBP15.31■□□□□ 0.04
SDHA-215ENST00000512962 LYPD8Q6UX82 237 aa15.31■□□□□ 0.04
SDHA-215ENST00000512962 SCUBE3Q8IX30 993 aa15.31■□□□□ 0.04
SDHA-215ENST00000512962 ZNF384Q8TF68 577 aa15.31■□□□□ 0.04
SDHA-215ENST00000512962 THAP11Q96EK4 314 aa15.31■□□□□ 0.04
SDHA-215ENST00000512962 SALL1Q9NSC2 1324 aa15.31■□□□□ 0.04
SDHA-215ENST00000512962 SLC5A1P13866 664 aa15.3■□□□□ 0.04
SDHA-215ENST00000512962 ADORA1P30542 326 aa15.3■□□□□ 0.04
SDHA-215ENST00000512962 JAG1P78504 1218 aa15.3■□□□□ 0.04
SDHA-215ENST00000512962 MAFAQ8NHW3 353 aaPredicted RBP15.3■□□□□ 0.04
SDHA-215ENST00000512962 MYLIPQ8WY64 445 aa15.3■□□□□ 0.04
SDHA-215ENST00000512962 LPIN2Q92539 896 aa15.3■□□□□ 0.04
SDHA-215ENST00000512962 TTYH1Q9H313 450 aaPredicted RBP15.3■□□□□ 0.04
SDHA-215ENST00000512962 MORF4L1Q9UBU8 362 aa15.3■□□□□ 0.04
SDHA-215ENST00000512962 TTC28Q96AY4 2481 aa15.29■□□□□ 0.04
SDHA-215ENST00000512962 EYA2O00167 538 aa15.29■□□□□ 0.04
SDHA-215ENST00000512962 BTDP43251 543 aa15.29■□□□□ 0.04
SDHA-215ENST00000512962 GCLCP48506 637 aaPredicted RBP15.29■□□□□ 0.04
SDHA-215ENST00000512962 RHBDL3P58872 404 aa15.29■□□□□ 0.04
SDHA-215ENST00000512962 C9orf50Q5SZB4 431 aa15.29■□□□□ 0.04
SDHA-215ENST00000512962 USP6NLQ92738 828 aa15.29■□□□□ 0.04
SDHA-215ENST00000512962 PORCNQ9H237 461 aa15.29■□□□□ 0.04
SDHA-215ENST00000512962 NR1I2O75469 434 aa15.28■□□□□ 0.04
SDHA-215ENST00000512962 ZNF697Q5TEC3 545 aa15.28■□□□□ 0.04
SDHA-215ENST00000512962 ZNF280CQ8ND82 737 aa15.28■□□□□ 0.04
SDHA-215ENST00000512962 SHHQ15465 462 aa15.27■□□□□ 0.04
SDHA-215ENST00000512962 ATP2B3Q16720 1220 aa15.27■□□□□ 0.04
SDHA-215ENST00000512962 P2RX7Q99572 595 aaKnown RBP15.27■□□□□ 0.04
SDHA-215ENST00000512962 USP44Q9H0E7 712 aa15.27■□□□□ 0.04
SDHA-215ENST00000512962 SIL1Q9H173 461 aa15.27■□□□□ 0.04
SDHA-215ENST00000512962 SEMA6BQ9H3T3 888 aa15.27■□□□□ 0.04
SDHA-215ENST00000512962 FLRT1Q9NZU1 646 aa15.27■□□□□ 0.04
SDHA-215ENST00000512962 FOCADQ5VW36 1801 aa15.27■□□□□ 0.03
SDHA-215ENST00000512962 MROH7-TTC4A0A0A0MT08 1334 aa15.26■□□□□ 0.03
SDHA-215ENST00000512962 ZKSCAN1P17029 563 aaPredicted RBP15.26■□□□□ 0.03
SDHA-215ENST00000512962 RASGRF1Q13972 1273 aa15.26■□□□□ 0.03
SDHA-215ENST00000512962 USP38Q8NB14 1042 aa15.26■□□□□ 0.03
SDHA-215ENST00000512962 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.26■□□□□ 0.03
SDHA-215ENST00000512962 RBPJLQ9UBG7 517 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms