RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 POTEB3A0JP26 581 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 ADAMTS4O75173 837 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 FGBP02675 491 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 ACRP10323 421 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 CDK7P50613 346 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 ACLYP53396 1101 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 WDR43Q15061 677 aaKnown RBP eCLIP12.25□□□□□ -0.45
NEDD9-213ENST00000512665 POTEBQ6S5H4 581 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 ERMP1Q7Z2K6 904 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 SHCBP1Q8NEM2 672 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 SUCLG2Q96I99 432 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 BTBD7Q9P203 1132 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 PI4KBQ9UBF8 816 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 BRWD1Q9NSI6 2320 aa12.25□□□□□ -0.45
NEDD9-213ENST00000512665 DCXO43602 365 aa12.24□□□□□ -0.45
NEDD9-213ENST00000512665 PGK1P00558 417 aa12.24□□□□□ -0.45
NEDD9-213ENST00000512665 CATSPERGQ6ZRH7 1159 aa12.24□□□□□ -0.45
NEDD9-213ENST00000512665 MFSD14AQ96MC6 490 aa12.24□□□□□ -0.45
NEDD9-213ENST00000512665 PHOX2BQ99453 314 aa12.24□□□□□ -0.45
NEDD9-213ENST00000512665 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
NEDD9-213ENST00000512665 DHX36Q9H2U1 1008 aaKnown RBP12.24□□□□□ -0.45
NEDD9-213ENST00000512665 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
NEDD9-213ENST00000512665 DCHS1Q96JQ0 3298 aa12.24□□□□□ -0.45
NEDD9-213ENST00000512665 SPDYE16A6NNV3 312 aaPredicted RBP12.23□□□□□ -0.45
NEDD9-213ENST00000512665 F6X3S4 739 aa12.23□□□□□ -0.45
NEDD9-213ENST00000512665 COBLO75128 1261 aa12.23□□□□□ -0.45
NEDD9-213ENST00000512665 PTPN5P54829 565 aa12.23□□□□□ -0.45
NEDD9-213ENST00000512665 JAG1P78504 1218 aa12.23□□□□□ -0.45
NEDD9-213ENST00000512665 CCSAPQ6IQ19 270 aaPredicted RBP12.23□□□□□ -0.45
NEDD9-213ENST00000512665 MAML3Q96JK9 1138 aa12.23□□□□□ -0.45
NEDD9-213ENST00000512665 PRRX2Q99811 253 aa12.23□□□□□ -0.45
NEDD9-213ENST00000512665 BICC1Q9H694 974 aaKnown RBP12.23□□□□□ -0.45
NEDD9-213ENST00000512665 ZBTB21Q9ULJ3 1066 aa12.23□□□□□ -0.45
NEDD9-213ENST00000512665 SLC4A7Q9Y6M7 1214 aa12.23□□□□□ -0.45
NEDD9-213ENST00000512665 TRIOO75962 3097 aa12.22□□□□□ -0.45
NEDD9-213ENST00000512665 AKR1A1P14550 325 aa12.22□□□□□ -0.45
NEDD9-213ENST00000512665 CST5P28325 142 aaPredicted RBP12.22□□□□□ -0.45
NEDD9-213ENST00000512665 RABGGTBP53611 331 aa12.22□□□□□ -0.45
NEDD9-213ENST00000512665 LEXMQ3ZCV2 418 aa12.22□□□□□ -0.45
NEDD9-213ENST00000512665 PRAMEF19Q5SWL8 479 aa12.22□□□□□ -0.45
NEDD9-213ENST00000512665 SPTY2D1Q68D10 685 aaPredicted RBP12.22□□□□□ -0.45
NEDD9-213ENST00000512665 FAM126BQ8IXS8 530 aa12.22□□□□□ -0.45
NEDD9-213ENST00000512665 ANKRD44Q8N8A2 993 aa12.22□□□□□ -0.45
NEDD9-213ENST00000512665 KLHDC9Q8NEP7 349 aa12.22□□□□□ -0.45
NEDD9-213ENST00000512665 TSR2Q969E8 191 aaKnown RBP12.22□□□□□ -0.45
NEDD9-213ENST00000512665 MOV10L1Q9BXT6 1211 aaKnown RBP12.22□□□□□ -0.45
NEDD9-213ENST00000512665 DNAJC18Q9H819 358 aa12.22□□□□□ -0.45
NEDD9-213ENST00000512665 LMCD1Q9NZU5 365 aa12.22□□□□□ -0.45
NEDD9-213ENST00000512665 APBB1O00213 710 aa12.21□□□□□ -0.45
NEDD9-213ENST00000512665 APAF1O14727 1248 aa12.21□□□□□ -0.45
NEDD9-213ENST00000512665 MYOGP15173 224 aa12.21□□□□□ -0.45
NEDD9-213ENST00000512665 ATP2A2P16615 1042 aaKnown RBP12.21□□□□□ -0.45
NEDD9-213ENST00000512665 VCAM1P19320 739 aa12.21□□□□□ -0.45
NEDD9-213ENST00000512665 USP14P54578 494 aa12.21□□□□□ -0.45
NEDD9-213ENST00000512665 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
NEDD9-213ENST00000512665 TMEM67Q5HYA8 995 aa12.21□□□□□ -0.45
NEDD9-213ENST00000512665 HFE2Q6ZVN8 426 aa12.21□□□□□ -0.45
NEDD9-213ENST00000512665 GLT1D1Q96MS3 346 aa12.21□□□□□ -0.45
NEDD9-213ENST00000512665 KIAA1683Q9H0B3 1180 aa12.21□□□□□ -0.45
NEDD9-213ENST00000512665 MROH8Q9H579 483 aa12.21□□□□□ -0.45
NEDD9-213ENST00000512665 SMCHD1A6NHR9 2005 aa12.21□□□□□ -0.46
NEDD9-213ENST00000512665 SYNRGQ9UMZ2 1314 aa12.2□□□□□ -0.46
NEDD9-213ENST00000512665 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.2□□□□□ -0.46
NEDD9-213ENST00000512665 EPOPA6NHQ4 379 aa12.2□□□□□ -0.46
NEDD9-213ENST00000512665 EYA2O00167 538 aa12.2□□□□□ -0.46
NEDD9-213ENST00000512665 RFXAPO00287 272 aa12.2□□□□□ -0.46
NEDD9-213ENST00000512665 TLR3O15455 904 aaKnown RBP12.2□□□□□ -0.46
NEDD9-213ENST00000512665 CD4P01730 458 aa12.2□□□□□ -0.46
NEDD9-213ENST00000512665 CA3P07451 260 aa12.2□□□□□ -0.46
NEDD9-213ENST00000512665 NBPF7P0C2Y1 421 aaPredicted RBP12.2□□□□□ -0.46
NEDD9-213ENST00000512665 SSTR3P32745 418 aaPredicted RBP12.2□□□□□ -0.46
NEDD9-213ENST00000512665 PUS10Q3MIT2 529 aaKnown RBP12.2□□□□□ -0.46
NEDD9-213ENST00000512665 KRT40Q6A162 431 aa12.2□□□□□ -0.46
NEDD9-213ENST00000512665 OTOP2Q7RTS6 562 aa12.2□□□□□ -0.46
NEDD9-213ENST00000512665 FOXP4Q8IVH2 680 aaPredicted RBP12.2□□□□□ -0.46
NEDD9-213ENST00000512665 ZFHX2Q9C0A1 2572 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-213ENST00000512665 A0A0U1RQG5 324 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-213ENST00000512665 ARVCFO00192 962 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 GFRA3O60609 400 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 LPXNO60711 386 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 ZNF865P0CJ78 1059 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-213ENST00000512665 ERCC3P19447 782 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 PHKA1P46020 1223 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 MECOMQ03112 1051 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 PRSS33Q8NF86 280 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 ZNF384Q8TF68 577 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 PPP1R12CQ9BZL4 782 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 SRCIN1Q9C0H9 1055 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 SPATC1LQ9H0A9 340 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 UBE2ZQ9H832 354 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-213ENST00000512665 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
NEDD9-213ENST00000512665 DIS3Q9Y2L1 958 aaKnown RBP12.19□□□□□ -0.46
NEDD9-213ENST00000512665 COL4A4P53420 1690 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-213ENST00000512665 LDHCP07864 332 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 PFKMP08237 780 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 CYP2C18P33260 490 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 GSTO1P78417 241 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 TAP1Q03518 808 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 GRB10Q13322 594 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 RASGRF1Q13972 1273 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms