RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 SMIM22K7EJ46 135 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 SF3B2Q13435 895 aaKnown RBP12.01□□□□□ -0.49
PDCD6-209ENST00000512466 SPA17Q15506 151 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 GPKOWQ92917 476 aaPredicted RBP eCLIP12.01□□□□□ -0.49
PDCD6-209ENST00000512466 CNNM2Q9H8M5 875 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 TRIM10Q9UDY6 481 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 ZEB2O60315 1214 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 RESP18Q5W5W9 173 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 REXO1L1PQ8IX06 675 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 NIP7Q9Y221 180 aaKnown RBP eCLIP12.01□□□□□ -0.49
PDCD6-209ENST00000512466 ABCC6O95255 1503 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 PHLPP2Q6ZVD8 1323 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 HEG1Q9ULI3 1381 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 MAGEB6P1A0A0J9YX57 407 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 AKR1B10O60218 316 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 PDE8BO95263 885 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 DYNLL1P63167 89 aaKnown RBP12.01□□□□□ -0.49
PDCD6-209ENST00000512466 CYP27A1Q02318 531 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 TTC38Q5R3I4 469 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 IQUBQ8NA54 791 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 NKX2-3Q8TAU0 364 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 NELFBQ8WX92 580 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 IL17RAQ96F46 866 aa12.01□□□□□ -0.49
PDCD6-209ENST00000512466 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 PPP6R2O75170 966 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 PLEKHA8P1O95397 391 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 SIK1P57059 783 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 FAM196AQ6ZSG2 479 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 CNGA4Q8IV77 575 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 MICALL1Q8N3F8 863 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 AATFQ9NY61 560 aaKnown RBP eCLIP12□□□□□ -0.49
PDCD6-209ENST00000512466 TFCP2L1Q9NZI6 479 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 KDM6AO15550 1401 aaPredicted RBP12□□□□□ -0.49
PDCD6-209ENST00000512466 ATP2C2O75185 946 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12□□□□□ -0.49
PDCD6-209ENST00000512466 GBP3Q9H0R5 595 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 BCCIPQ9P287 314 aaKnown RBP eCLIP12□□□□□ -0.49
PDCD6-209ENST00000512466 FEZ2Q9UHY8 353 aaPredicted RBP12□□□□□ -0.49
PDCD6-209ENST00000512466 ZBTB1Q9Y2K1 713 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 GDAQ9Y2T3 454 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 TRIM49BA6NDI0 452 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 USP17L12C9JPN9 530 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 USP17L21D6R901 530 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 NMT2O60551 498 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 SASH3O75995 380 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 MMP1P03956 469 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 CXCR5P32302 372 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 ASIC1P78348 528 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 RASGRF1Q13972 1273 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 RAD9BQ6WBX8 426 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 TC2NQ8N9U0 490 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 TTLL11Q8NHH1 800 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 RIN2Q8WYP3 895 aaPredicted RBP12□□□□□ -0.49
PDCD6-209ENST00000512466 CTAGE1Q96RT6 745 aa12□□□□□ -0.49
PDCD6-209ENST00000512466 COL14A1Q05707 1796 aaKnown RBP11.99□□□□□ -0.49
PDCD6-209ENST00000512466 CTSWP56202 376 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 TBC1D8BQ0IIM8 1120 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 PUM3Q15397 648 aaKnown RBP11.99□□□□□ -0.49
PDCD6-209ENST00000512466 CACNA2D4Q7Z3S7 1137 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 SRGAP1Q7Z6B7 1085 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 STRBPQ96SI9 672 aaKnown RBP11.99□□□□□ -0.49
PDCD6-209ENST00000512466 CCNL1Q9UK58 526 aaPredicted RBP11.99□□□□□ -0.49
PDCD6-209ENST00000512466 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 MYO1CO00159 1063 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 EPS15P42566 896 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 CAVIN4Q5BKX8 364 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 TRMT1LQ7Z2T5 733 aaKnown RBP11.99□□□□□ -0.49
PDCD6-209ENST00000512466 IFT81Q8WYA0 676 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 RABGGTAQ92696 567 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 LY9Q9HBG7 655 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 CDC23Q9UJX2 597 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 RGPD5Q99666 1765 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 COL16A1Q07092 1604 aaPredicted RBP11.99□□□□□ -0.49
PDCD6-209ENST00000512466 TUBB4AP04350 444 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 PLCD1P51178 756 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 PAK1Q13153 545 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 SMIM5Q71RC9 77 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 ZBTB38Q8NAP3 1195 aaPredicted RBP11.99□□□□□ -0.49
PDCD6-209ENST00000512466 MCM9Q9NXL9 1143 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 UTYO14607 1347 aa11.99□□□□□ -0.49
PDCD6-209ENST00000512466 H2AFXP16104 143 aaPredicted RBP11.98□□□□□ -0.49
PDCD6-209ENST00000512466 PPARAQ07869 468 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 SPATA1Q5VX52 437 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 CPVLQ9H3G5 476 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 L2HGDHQ9H9P8 463 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 FAM207AQ9NSI2 230 aaPredicted RBP11.98□□□□□ -0.49
PDCD6-209ENST00000512466 USP54Q70EL1 1684 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 TRIM37O94972 964 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 GOLGA8HP0CJ92 632 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 FXR1P51114 621 aaKnown RBP eCLIP11.98□□□□□ -0.49
PDCD6-209ENST00000512466 LETM2Q2VYF4 491 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 TRIM65Q6PJ69 517 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 LPIN2Q92539 896 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 CCDC42Q96M95 316 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 CHP1Q99653 195 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 PXDNLA1KZ92 1463 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 KCNJ18B7U540 433 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 TBC1D8O95759 1140 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 BMP6P22004 513 aa11.98□□□□□ -0.49
PDCD6-209ENST00000512466 MORC3Q14149 939 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms