RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 CCDC178Q5BJE1 867 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 IFFO2Q5TF58 517 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 HHIPL2Q6UWX4 724 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 KIAA0825Q8IV33 1275 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 TNPO1Q92973 898 aaKnown RBP9.45□□□□□ -0.9
HTT-209ENST00000512068 TRIM34Q9BYJ4 488 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 AGXT2Q9BYV1 514 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 SPON1Q9HCB6 807 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 ZNF277Q9NRM2 450 aaPredicted RBP9.45□□□□□ -0.9
HTT-209ENST00000512068 USP40Q9NVE5 1235 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 TMOD2Q9NZR1 351 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 DAGLAQ9Y4D2 1042 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 SLC12A7Q9Y666 1083 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 VPS37CA5D8V6 355 aaPredicted RBP9.44□□□□□ -0.9
HTT-209ENST00000512068 GOLGA8AA7E2F4 631 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 ZBTB43O43298 467 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 STX6O43752 255 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 KCNA3P22001 575 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 RFC5P40937 340 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 ANTXR2P58335 489 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 CCT2P78371 535 aaKnown RBP9.44□□□□□ -0.9
HTT-209ENST00000512068 HDLBPQ00341 1268 aaKnown RBP9.44□□□□□ -0.9
HTT-209ENST00000512068 SCRN1Q12765 414 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 PICALMQ13492 652 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 MTMR2Q13614 643 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 Q3C1V9 767 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 DACT2Q5SW24 774 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 FOXD4L5Q5VV16 416 aaPredicted RBP9.44□□□□□ -0.9
HTT-209ENST00000512068 LARP1BQ659C4 914 aaKnown RBP9.44□□□□□ -0.9
HTT-209ENST00000512068 CYB5R4Q7L1T6 521 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 TTC6Q86TZ1 520 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 ZNF444Q8N0Y2 327 aaPredicted RBP9.44□□□□□ -0.9
HTT-209ENST00000512068 OGFOD1Q8N543 542 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 FOXD4L4Q8WXT5 416 aaPredicted RBP9.44□□□□□ -0.9
HTT-209ENST00000512068 SAP30BPQ9UHR5 308 aaKnown RBP9.44□□□□□ -0.9
HTT-209ENST00000512068 FLT1P17948 1338 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 SCN9AQ15858 1988 aa9.44□□□□□ -0.9
HTT-209ENST00000512068 FER1L6Q2WGJ9 1857 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 TNKSO95271 1327 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 CYP2D7A0A087X1C5 515 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 CCDC196A0A1B0GTZ2 297 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 SPDYE5A6NIY4 337 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 ORC4O43929 436 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 USP17L8P0C7I0 530 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 TSPY3P0CV98 308 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 TSPY8P0CW00 308 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 PDIA3P30101 505 aaKnown RBP9.43□□□□□ -0.9
HTT-209ENST00000512068 LIFRP42702 1097 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 SLC4A8Q2Y0W8 1093 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 IFIT1BQ5T764 474 aaKnown RBP9.43□□□□□ -0.9
HTT-209ENST00000512068 C12orf60Q5U649 245 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 CATIPQ7Z7H3 387 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 MICU3Q86XE3 530 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 SCUBE3Q8IX30 993 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 CERS5Q8N5B7 392 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 ZDHHC15Q96MV8 337 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 ZKSCAN3Q9BRR0 538 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 MXD3Q9BW11 206 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 MRIQ9BWK5 157 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 ZSWIM5Q9P217 1185 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 SERPINA10Q9UK55 444 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 ZNRF3Q9ULT6 936 aa9.43□□□□□ -0.9
HTT-209ENST00000512068 ARFGEF1Q9Y6D6 1849 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 SNED1Q8TER0 1413 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 ROBO3Q96MS0 1386 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 PTPDC1A2A3K4 754 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 NR1I2O75469 434 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 PRDM1O75626 825 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 RAD17O75943 681 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 BRD1O95696 1058 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 CALM1P0DP23 149 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 CALM2P0DP24 149 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 CALM3P0DP25 149 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 CYP2D6P10635 497 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 NCLP19338 710 aaKnown RBP9.42□□□□□ -0.9
HTT-209ENST00000512068 MCM4P33991 863 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 EVCP57679 992 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 TNIP1Q15025 636 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 BLOC1S3Q6QNY0 202 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 SGMS1Q86VZ5 419 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 NUP133Q8WUM0 1156 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 RNF166Q96A37 237 aaPredicted RBP9.42□□□□□ -0.9
HTT-209ENST00000512068 DDX11Q96FC9 970 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 ZSCAN10Q96SZ4 725 aaPredicted RBP9.42□□□□□ -0.9
HTT-209ENST00000512068 LY9Q9HBG7 655 aa9.42□□□□□ -0.9
HTT-209ENST00000512068 PSMD14O00487 310 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 MYO1BO43795 1136 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 ZSCAN22P10073 491 aaPredicted RBP9.41□□□□□ -0.9
HTT-209ENST00000512068 SYT1P21579 422 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 RCAN1P53805 252 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 EIF6P56537 245 aaKnown RBP9.41□□□□□ -0.9
HTT-209ENST00000512068 RHBDL3P58872 404 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 AKAP17AQ02040 695 aaKnown RBP9.41□□□□□ -0.9
HTT-209ENST00000512068 COL9A3Q14050 684 aaPredicted RBP9.41□□□□□ -0.9
HTT-209ENST00000512068 TRIM29Q14134 588 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 PPP2R5BQ15173 497 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 RTN1Q16799 776 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 CFAP100Q494V2 611 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 MCTP1Q6DN14 999 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms