RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 STMN4Q9H169 189 aaPredicted RBP12.1□□□□□ -0.47
CPNE4-209ENST00000512055 SPECC1L-ADORA2AF8WAN1 911 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 NDC80O14777 642 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 HMGB2P26583 209 aaKnown RBP12.1□□□□□ -0.47
CPNE4-209ENST00000512055 KIF5AQ12840 1032 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 NSUN7Q8NE18 718 aaKnown RBP12.1□□□□□ -0.47
CPNE4-209ENST00000512055 KCNK9Q9NPC2 374 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 ATG3Q9NT62 314 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 MAP3K7CLP57077 242 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 AMPD3Q01432 767 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 SLMAPQ14BN4 828 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 RASIP1Q5U651 963 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 PYM1Q9BRP8 204 aaKnown RBP12.09□□□□□ -0.47
CPNE4-209ENST00000512055 MYOM1P52179 1685 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 ZNF654Q8IZM8 581 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 ARHGEF2Q92974 986 aaKnown RBP12.09□□□□□ -0.47
CPNE4-209ENST00000512055 TSG101Q99816 390 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 ZDHHC9Q9Y397 364 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 CHGBP05060 677 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 MYL5Q02045 173 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 UBE3CQ15386 1083 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 GOLGA1Q92805 767 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 IL25Q9H293 177 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 ZNF75DP51815 510 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 MAPKAPK5Q8IW41 473 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 EXOC1Q9NV70 894 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 TNS3Q68CZ2 1445 aa12.09□□□□□ -0.47
CPNE4-209ENST00000512055 TNNI2P48788 182 aa12.08□□□□□ -0.47
CPNE4-209ENST00000512055 SKOR1P84550 965 aa12.08□□□□□ -0.47
CPNE4-209ENST00000512055 PRKAB2O43741 272 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 CCDC172P0C7W6 258 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 ASIC1P78348 528 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 CUL5Q93034 780 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 RRP36Q96EU6 259 aaKnown RBP12.08□□□□□ -0.48
CPNE4-209ENST00000512055 C6orf50Q9HD87 102 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 FRMD4BQ9Y2L6 1034 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 PLCG2P16885 1265 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 ACTN2P35609 894 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 RMND1Q9NWS8 449 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 CLIC4Q9Y696 253 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 SUSD4Q5VX71 490 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 TGFBRAP1Q8WUH2 860 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 LRRC45Q96CN5 670 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 GGA1Q9UJY5 639 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 PCDHA7Q9UN72 937 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.08□□□□□ -0.48
CPNE4-209ENST00000512055 A0A087WWV3 80 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 ADD2P35612 726 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 DTHD1Q6ZMT9 781 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 STAMQ92783 540 aa12.08□□□□□ -0.48
CPNE4-209ENST00000512055 GMNNO75496 209 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 WDHD1O75717 1129 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-209ENST00000512055 RHOXF2BP0C7M4 288 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 TFAP4Q01664 338 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 LETM2Q2VYF4 491 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 ADALQ6DHV7 355 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 IQUBQ8NA54 791 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 FBXO18Q8NFZ0 1043 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 RBM17Q96I25 401 aaKnown RBP12.07□□□□□ -0.48
CPNE4-209ENST00000512055 RHOXF2Q9BQY4 288 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 PIH1D3Q9NQM4 214 aaKnown RBP12.07□□□□□ -0.48
CPNE4-209ENST00000512055 MAPK8IP1Q9UQF2 711 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 BTBD18B2RXH4 712 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 FGFR1OPO95684 399 aaKnown RBP12.07□□□□□ -0.48
CPNE4-209ENST00000512055 TOB2Q14106 344 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-209ENST00000512055 GKAP1Q5VSY0 366 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-209ENST00000512055 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 PABPN1LA6NDY0 278 aaKnown RBP12.07□□□□□ -0.48
CPNE4-209ENST00000512055 CUTAO60888 179 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 MCAMP43121 646 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 RNF10Q8N5U6 811 aaKnown RBP12.07□□□□□ -0.48
CPNE4-209ENST00000512055 EHBP1Q8NDI1 1231 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 TNKSO95271 1327 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 PFKFB1P16118 471 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 ALDH3A1P30838 453 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 GABPB1Q06547 395 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-209ENST00000512055 ERFEQ4G0M1 354 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 CCDC40Q4G0X9 1142 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 AFAP1L1Q8TED9 768 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 DDX12PQ92771 950 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 ZMYM6O95789 1325 aa12.07□□□□□ -0.48
CPNE4-209ENST00000512055 PARP1P09874 1014 aaKnown RBP12.06□□□□□ -0.48
CPNE4-209ENST00000512055 TRIM21P19474 475 aaKnown RBP12.06□□□□□ -0.48
CPNE4-209ENST00000512055 HPDP32754 393 aaPredicted RBP12.06□□□□□ -0.48
CPNE4-209ENST00000512055 MCUR1Q96AQ8 359 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 USP32Q8NFA0 1604 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 MX2P20592 715 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 PNOCQ13519 176 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 FANCBQ8NB91 859 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 CLIC6Q96NY7 704 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 GPCPD1Q9NPB8 672 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 CEMIPQ8WUJ3 1361 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 OPHN1O60890 802 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 USP6NLQ92738 828 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 ODF2LQ9ULJ1 636 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 ARHGAP25P42331 645 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 NDUFA8P51970 172 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 FOXO4P98177 505 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 APOA5Q6Q788 366 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms