RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ABCB5Q2M3G0 1257 aa23.28■■□□□ 1.32
HMGCS1-206ENST00000511774 KIAA1755Q5JYT7 1200 aa23.28■■□□□ 1.32
HMGCS1-206ENST00000511774 DPP9Q86TI2 863 aa23.28■■□□□ 1.32
HMGCS1-206ENST00000511774 SERPINB13Q9UIV8 391 aa23.28■■□□□ 1.32
HMGCS1-206ENST00000511774 A0A1W2PRG0 241 aa23.27■■□□□ 1.32
HMGCS1-206ENST00000511774 PLCD1P51178 756 aa23.27■■□□□ 1.32
HMGCS1-206ENST00000511774 GRIN2CQ14957 1233 aa23.27■■□□□ 1.32
HMGCS1-206ENST00000511774 CERKLQ49MI3 558 aaPredicted RBP23.27■■□□□ 1.32
HMGCS1-206ENST00000511774 ATF7IPQ6VMQ6 1270 aa23.27■■□□□ 1.32
HMGCS1-206ENST00000511774 EHD4Q9H223 541 aa23.27■■□□□ 1.32
HMGCS1-206ENST00000511774 TLR7Q9NYK1 1049 aaKnown RBP23.27■■□□□ 1.32
HMGCS1-206ENST00000511774 RAPGEFL1Q9UHV5 662 aa23.27■■□□□ 1.32
HMGCS1-206ENST00000511774 PARP14Q460N5 1801 aa23.26■■□□□ 1.31
HMGCS1-206ENST00000511774 ERCC3P19447 782 aa23.26■■□□□ 1.31
HMGCS1-206ENST00000511774 SEPT2Q15019 361 aa23.26■■□□□ 1.31
HMGCS1-206ENST00000511774 GPR108Q9NPR9 543 aa23.26■■□□□ 1.31
HMGCS1-206ENST00000511774 GNAI2P04899 355 aa23.25■■□□□ 1.31
HMGCS1-206ENST00000511774 CT47B1P0C2W7 299 aaPredicted RBP23.25■■□□□ 1.31
HMGCS1-206ENST00000511774 C1orf53Q5VUE5 145 aa23.25■■□□□ 1.31
HMGCS1-206ENST00000511774 SPATC1LQ9H0A9 340 aa23.25■■□□□ 1.31
HMGCS1-206ENST00000511774 NAV1Q8NEY1 1877 aa23.24■■□□□ 1.31
HMGCS1-206ENST00000511774 USP5P45974 858 aa23.24■■□□□ 1.31
HMGCS1-206ENST00000511774 CCDC158Q5M9N0 1113 aa23.24■■□□□ 1.31
HMGCS1-206ENST00000511774 ARHGAP45Q92619 1136 aa23.24■■□□□ 1.31
HMGCS1-206ENST00000511774 ZNF512BQ96KM6 892 aaPredicted RBP23.24■■□□□ 1.31
HMGCS1-206ENST00000511774 RNPC3Q96LT9 517 aaKnown RBP23.24■■□□□ 1.31
HMGCS1-206ENST00000511774 DBNLQ9UJU6 430 aaKnown RBP23.24■■□□□ 1.31
HMGCS1-206ENST00000511774 COL11A1P12107 1806 aaPredicted RBP23.24■■□□□ 1.31
HMGCS1-206ENST00000511774 STRNO43815 780 aa23.23■■□□□ 1.31
HMGCS1-206ENST00000511774 COL9A1P20849 921 aa23.23■■□□□ 1.31
HMGCS1-206ENST00000511774 POLA2Q14181 598 aa23.23■■□□□ 1.31
HMGCS1-206ENST00000511774 ANTXR1Q9H6X2 564 aa23.23■■□□□ 1.31
HMGCS1-206ENST00000511774 PHF24Q9UPV7 400 aa23.23■■□□□ 1.31
HMGCS1-206ENST00000511774 IDH1O75874 414 aaKnown RBP23.22■■□□□ 1.31
HMGCS1-206ENST00000511774 TRIM27P14373 513 aa23.22■■□□□ 1.31
HMGCS1-206ENST00000511774 GABPAQ06546 454 aa23.22■■□□□ 1.31
HMGCS1-206ENST00000511774 COG2Q14746 738 aa23.22■■□□□ 1.31
HMGCS1-206ENST00000511774 MAGEB6Q8N7X4 407 aa23.22■■□□□ 1.31
HMGCS1-206ENST00000511774 SHCBP1Q8NEM2 672 aa23.22■■□□□ 1.31
HMGCS1-206ENST00000511774 SYMPKQ92797 1274 aaKnown RBP23.22■■□□□ 1.31
HMGCS1-206ENST00000511774 MAML3Q96JK9 1138 aa23.22■■□□□ 1.31
HMGCS1-206ENST00000511774 PLXNA1Q9UIW2 1896 aa23.22■■□□□ 1.31
HMGCS1-206ENST00000511774 TMEM265A0A087WTH1 108 aa23.21■■□□□ 1.31
HMGCS1-206ENST00000511774 TJAP1Q5JTD0 557 aa23.21■■□□□ 1.31
HMGCS1-206ENST00000511774 CABP5Q9NP86 173 aa23.21■■□□□ 1.31
HMGCS1-206ENST00000511774 CHD7Q9P2D1 2997 aa23.21■■□□□ 1.31
HMGCS1-206ENST00000511774 REV3LO60673 3130 aa23.21■■□□□ 1.31
HMGCS1-206ENST00000511774 KIAA0355O15063 1070 aa23.2■■□□□ 1.3
HMGCS1-206ENST00000511774 PGK1P00558 417 aa23.2■■□□□ 1.3
HMGCS1-206ENST00000511774 CLTBP09497 229 aa23.2■■□□□ 1.3
HMGCS1-206ENST00000511774 TAL1P17542 331 aaPredicted RBP23.2■■□□□ 1.3
HMGCS1-206ENST00000511774 DNAJB2P25686 324 aa23.2■■□□□ 1.3
HMGCS1-206ENST00000511774 LENG1Q96BZ8 264 aaPredicted RBP23.2■■□□□ 1.3
HMGCS1-206ENST00000511774 TANGO6Q9C0B7 1094 aa23.2■■□□□ 1.3
HMGCS1-206ENST00000511774 CCDC8Q9H0W5 538 aaPredicted RBP23.2■■□□□ 1.3
HMGCS1-206ENST00000511774 TACC3Q9Y6A5 838 aa23.2■■□□□ 1.3
HMGCS1-206ENST00000511774 TTC6Q86TZ1 520 aa23.19■■□□□ 1.3
HMGCS1-206ENST00000511774 CLEC10AQ8IUN9 316 aa23.19■■□□□ 1.3
HMGCS1-206ENST00000511774 ATG4CQ96DT6 458 aa23.19■■□□□ 1.3
HMGCS1-206ENST00000511774 RIOK1Q9BRS2 568 aaKnown RBP23.19■■□□□ 1.3
HMGCS1-206ENST00000511774 HOXC10Q9NYD6 342 aa23.19■■□□□ 1.3
HMGCS1-206ENST00000511774 TNFRSF10AO00220 468 aa23.18■■□□□ 1.3
HMGCS1-206ENST00000511774 PQBP1O60828 265 aaKnown RBP23.18■■□□□ 1.3
HMGCS1-206ENST00000511774 DSG3P32926 999 aa23.18■■□□□ 1.3
HMGCS1-206ENST00000511774 NCAPG2Q86XI2 1143 aa23.18■■□□□ 1.3
HMGCS1-206ENST00000511774 SIAH1Q8IUQ4 282 aa23.18■■□□□ 1.3
HMGCS1-206ENST00000511774 SSH3Q8TE77 659 aa23.18■■□□□ 1.3
HMGCS1-206ENST00000511774 CLUAP1Q96AJ1 413 aa23.18■■□□□ 1.3
HMGCS1-206ENST00000511774 EAF2Q96CJ1 260 aaPredicted RBP23.18■■□□□ 1.3
HMGCS1-206ENST00000511774 XPNPEP3Q9NQH7 507 aa23.18■■□□□ 1.3
HMGCS1-206ENST00000511774 A0A1W2PQ45 241 aaPredicted RBP23.17■■□□□ 1.3
HMGCS1-206ENST00000511774 A0A1W2PQY0 241 aa23.17■■□□□ 1.3
HMGCS1-206ENST00000511774 IGSF3O75054 1194 aa23.17■■□□□ 1.3
HMGCS1-206ENST00000511774 BCAR3O75815 825 aa23.17■■□□□ 1.3
HMGCS1-206ENST00000511774 PLS1Q14651 629 aa23.17■■□□□ 1.3
HMGCS1-206ENST00000511774 ABRAQ8N0Z2 381 aa23.17■■□□□ 1.3
HMGCS1-206ENST00000511774 SLC44A5Q8NCS7 719 aa23.17■■□□□ 1.3
HMGCS1-206ENST00000511774 PGK2P07205 417 aa23.16■■□□□ 1.3
HMGCS1-206ENST00000511774 RAG1P15918 1043 aa23.16■■□□□ 1.3
HMGCS1-206ENST00000511774 FPGSQ05932 587 aa23.16■■□□□ 1.3
HMGCS1-206ENST00000511774 FAAP100Q0VG06 881 aa23.16■■□□□ 1.3
HMGCS1-206ENST00000511774 OS9Q13438 667 aaPredicted RBP23.16■■□□□ 1.3
HMGCS1-206ENST00000511774 MROH8Q9H579 483 aa23.16■■□□□ 1.3
HMGCS1-206ENST00000511774 ZNF576Q9H609 170 aa23.16■■□□□ 1.3
HMGCS1-206ENST00000511774 MYH8P13535 1937 aa23.16■■□□□ 1.3
HMGCS1-206ENST00000511774 MPHOSPH10O00566 681 aaKnown RBP23.15■■□□□ 1.3
HMGCS1-206ENST00000511774 SURF6O75683 361 aaKnown RBP23.15■■□□□ 1.3
HMGCS1-206ENST00000511774 CYP2D6P10635 497 aa23.15■■□□□ 1.3
HMGCS1-206ENST00000511774 TMEM132BQ14DG7 1078 aa23.15■■□□□ 1.3
HMGCS1-206ENST00000511774 SPICE1Q8N0Z3 855 aa23.15■■□□□ 1.3
HMGCS1-206ENST00000511774 C1orf115Q9H7X2 142 aa23.15■■□□□ 1.3
HMGCS1-206ENST00000511774 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.14■■□□□ 1.29
HMGCS1-206ENST00000511774 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.14■■□□□ 1.29
HMGCS1-206ENST00000511774 ZNF316A6NFI3 1004 aaPredicted RBP23.14■■□□□ 1.29
HMGCS1-206ENST00000511774 GRXCR1A8MXD5 290 aa23.14■■□□□ 1.29
HMGCS1-206ENST00000511774 ZNF865P0CJ78 1059 aaPredicted RBP23.14■■□□□ 1.29
HMGCS1-206ENST00000511774 RARBP10826 455 aa23.14■■□□□ 1.29
HMGCS1-206ENST00000511774 PBX2P40425 430 aa23.14■■□□□ 1.29
HMGCS1-206ENST00000511774 ATP8B2P98198 1209 aa23.14■■□□□ 1.29
HMGCS1-206ENST00000511774 C16orf59Q7L2K0 433 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms