RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 PRKAR2AP13861 404 aaKnown RBP18.39■□□□□ 0.53
COL1A1-213ENST00000511732 RGS2P41220 211 aa18.39■□□□□ 0.53
COL1A1-213ENST00000511732 MNX1P50219 401 aaPredicted RBP18.39■□□□□ 0.53
COL1A1-213ENST00000511732 COG2Q14746 738 aa18.39■□□□□ 0.53
COL1A1-213ENST00000511732 AMOTL1Q8IY63 956 aa18.39■□□□□ 0.53
COL1A1-213ENST00000511732 DIS3LQ8TF46 1054 aaKnown RBP18.39■□□□□ 0.53
COL1A1-213ENST00000511732 PAWRQ96IZ0 340 aaKnown RBP18.39■□□□□ 0.53
COL1A1-213ENST00000511732 CCDC17Q96LX7 622 aa18.39■□□□□ 0.53
COL1A1-213ENST00000511732 CRBNQ96SW2 442 aa18.39■□□□□ 0.53
COL1A1-213ENST00000511732 HTATIP2Q9BUP3 242 aa18.39■□□□□ 0.53
COL1A1-213ENST00000511732 M0R2C6 588 aa18.38■□□□□ 0.53
COL1A1-213ENST00000511732 ZKSCAN1P17029 563 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-213ENST00000511732 CAPN2P17655 700 aa18.38■□□□□ 0.53
COL1A1-213ENST00000511732 PTPREP23469 700 aa18.38■□□□□ 0.53
COL1A1-213ENST00000511732 CCNA1P78396 465 aa18.38■□□□□ 0.53
COL1A1-213ENST00000511732 CACNB2Q08289 660 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-213ENST00000511732 MAP2K5Q13163 448 aa18.38■□□□□ 0.53
COL1A1-213ENST00000511732 SPICE1Q8N0Z3 855 aa18.38■□□□□ 0.53
COL1A1-213ENST00000511732 DDRGK1Q96HY6 314 aa18.38■□□□□ 0.53
COL1A1-213ENST00000511732 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.38■□□□□ 0.53
COL1A1-213ENST00000511732 TANGO6Q9C0B7 1094 aa18.38■□□□□ 0.53
COL1A1-213ENST00000511732 VCPKMTQ9H867 229 aa18.38■□□□□ 0.53
COL1A1-213ENST00000511732 ARHGEF10LQ9HCE6 1279 aa18.38■□□□□ 0.53
COL1A1-213ENST00000511732 EPB41L4AQ9HCS5 686 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-213ENST00000511732 ARPP21Q9UBL0 812 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-213ENST00000511732 TTC41PQ6P2S7 1318 aa18.38■□□□□ 0.53
COL1A1-213ENST00000511732 EEF2P13639 858 aaKnown RBP18.37■□□□□ 0.53
COL1A1-213ENST00000511732 SBK1Q52WX2 424 aa18.37■□□□□ 0.53
COL1A1-213ENST00000511732 WDR78Q5VTH9 848 aa18.37■□□□□ 0.53
COL1A1-213ENST00000511732 STK11IPQ8N1F8 1099 aa18.37■□□□□ 0.53
COL1A1-213ENST00000511732 LPAR1Q92633 364 aa18.37■□□□□ 0.53
COL1A1-213ENST00000511732 SEC62Q99442 399 aaKnown RBP18.37■□□□□ 0.53
COL1A1-213ENST00000511732 APBA2Q99767 749 aa18.37■□□□□ 0.53
COL1A1-213ENST00000511732 HOXC10Q9NYD6 342 aa18.37■□□□□ 0.53
COL1A1-213ENST00000511732 FLRT1Q9NZU1 646 aa18.37■□□□□ 0.53
COL1A1-213ENST00000511732 GPAA1O43292 621 aa18.36■□□□□ 0.53
COL1A1-213ENST00000511732 CCND3P30281 292 aaPredicted RBP18.36■□□□□ 0.53
COL1A1-213ENST00000511732 DSG3P32926 999 aa18.36■□□□□ 0.53
COL1A1-213ENST00000511732 GRB14Q14449 540 aa18.36■□□□□ 0.53
COL1A1-213ENST00000511732 TRMT44Q8IYL2 757 aaKnown RBP18.36■□□□□ 0.53
COL1A1-213ENST00000511732 NPLOC4Q8TAT6 608 aa18.36■□□□□ 0.53
COL1A1-213ENST00000511732 SALL3Q9BXA9 1300 aa18.36■□□□□ 0.53
COL1A1-213ENST00000511732 MOV10L1Q9BXT6 1211 aaKnown RBP18.36■□□□□ 0.53
COL1A1-213ENST00000511732 CWC22Q9HCG8 908 aaKnown RBP18.36■□□□□ 0.53
COL1A1-213ENST00000511732 OGDHLQ9ULD0 1010 aa18.36■□□□□ 0.53
COL1A1-213ENST00000511732 COL11A1P12107 1806 aaPredicted RBP18.35■□□□□ 0.53
COL1A1-213ENST00000511732 SLC15A5A6NIM6 579 aa18.35■□□□□ 0.53
COL1A1-213ENST00000511732 MINDY4BA8MYZ0 360 aa18.35■□□□□ 0.53
COL1A1-213ENST00000511732 ZFYP08048 801 aaPredicted RBP18.35■□□□□ 0.53
COL1A1-213ENST00000511732 GIMAP6Q6P9H5 292 aa18.35■□□□□ 0.53
COL1A1-213ENST00000511732 NECAB2Q7Z6G3 386 aa18.35■□□□□ 0.53
COL1A1-213ENST00000511732 ANKLE1Q8NAG6 615 aa18.35■□□□□ 0.53
COL1A1-213ENST00000511732 ATG4CQ96DT6 458 aa18.35■□□□□ 0.53
COL1A1-213ENST00000511732 SPATC1LQ9H0A9 340 aa18.35■□□□□ 0.53
COL1A1-213ENST00000511732 SH2D4AQ9H788 454 aa18.35■□□□□ 0.53
COL1A1-213ENST00000511732 KANSL2Q9H9L4 492 aa18.35■□□□□ 0.53
COL1A1-213ENST00000511732 FRMPD3Q5JV73 1810 aa18.35■□□□□ 0.53
COL1A1-213ENST00000511732 ROBO3Q96MS0 1386 aa18.34■□□□□ 0.53
COL1A1-213ENST00000511732 FLOT1O75955 427 aa18.34■□□□□ 0.53
COL1A1-213ENST00000511732 GLRX3O76003 335 aaKnown RBP18.34■□□□□ 0.53
COL1A1-213ENST00000511732 RASA1P20936 1047 aa18.34■□□□□ 0.53
COL1A1-213ENST00000511732 ATP2B2Q01814 1243 aa18.34■□□□□ 0.53
COL1A1-213ENST00000511732 LHX8Q68G74 356 aa18.34■□□□□ 0.53
COL1A1-213ENST00000511732 CHRDL2Q6WN34 429 aa18.34■□□□□ 0.53
COL1A1-213ENST00000511732 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
COL1A1-213ENST00000511732 ZNF236Q9UL36 1845 aa18.33■□□□□ 0.53
COL1A1-213ENST00000511732 ERC2O15083 957 aa18.33■□□□□ 0.52
COL1A1-213ENST00000511732 WDR46O15213 610 aaKnown RBP18.33■□□□□ 0.52
COL1A1-213ENST00000511732 IGHA2P01877 340 aa18.33■□□□□ 0.52
COL1A1-213ENST00000511732 HOXC6P09630 235 aa18.33■□□□□ 0.52
COL1A1-213ENST00000511732 ERCC3P19447 782 aa18.33■□□□□ 0.52
COL1A1-213ENST00000511732 MX1P20591 662 aa18.33■□□□□ 0.52
COL1A1-213ENST00000511732 FXR1P51114 621 aaKnown RBP eCLIP18.33■□□□□ 0.52
COL1A1-213ENST00000511732 FBXO28Q9NVF7 368 aa18.33■□□□□ 0.52
COL1A1-213ENST00000511732 IVNS1ABPQ9Y6Y0 642 aa18.33■□□□□ 0.52
COL1A1-213ENST00000511732 PATL2C9JE40 543 aaKnown RBP18.32■□□□□ 0.52
COL1A1-213ENST00000511732 EVI5O60447 810 aa18.32■□□□□ 0.52
COL1A1-213ENST00000511732 ANKRD45Q5TZF3 282 aa18.32■□□□□ 0.52
COL1A1-213ENST00000511732 IFNL3Q8IZI9 196 aa18.32■□□□□ 0.52
COL1A1-213ENST00000511732 NBPF3Q9H094 633 aa18.32■□□□□ 0.52
COL1A1-213ENST00000511732 RBM27Q9P2N5 1060 aaKnown RBP18.32■□□□□ 0.52
COL1A1-213ENST00000511732 ADAMTS5Q9UNA0 930 aa18.32■□□□□ 0.52
COL1A1-213ENST00000511732 NR2E3Q9Y5X4 410 aa18.32■□□□□ 0.52
COL1A1-213ENST00000511732 APPP05067 770 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 GNAT2P19087 354 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 ADORA2AP29274 412 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 TDO2P48775 406 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 PLS1Q14651 629 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 TMEM132BQ14DG7 1078 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 ZMYM1Q5SVZ6 1142 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 SAMD1Q6SPF0 538 aaPredicted RBP18.31■□□□□ 0.52
COL1A1-213ENST00000511732 MB21D1Q8N884 522 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 SHCBP1Q8NEM2 672 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 FSD1Q9BTV5 496 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 PRO3102Q9H379 93 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 MKNK2Q9HBH9 465 aa18.31■□□□□ 0.52
COL1A1-213ENST00000511732 PFASO15067 1338 aa18.3■□□□□ 0.52
COL1A1-213ENST00000511732 ZNFX1Q9P2E3 1918 aaKnown RBP18.3■□□□□ 0.52
COL1A1-213ENST00000511732 MYH4Q9Y623 1939 aa18.3■□□□□ 0.52
COL1A1-213ENST00000511732 IGKV6D-41A0A0C4DH26 115 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms