RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 KLF18A0A0U1RQI7 1052 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 CCDC69A6NI79 296 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 GOLGA8BA8MQT2 603 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 DDAH1O94760 285 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 POLR3DP05423 398 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-228ENST00000511676 NOVP48745 357 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 APOBRQ0VD83 1088 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 ST3GAL1Q11201 340 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
NR1I3-228ENST00000511676 SNAPC2Q13487 334 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 COL9A3Q14050 684 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-228ENST00000511676 TAF1CQ15572 869 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-228ENST00000511676 SLC4A8Q2Y0W8 1093 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 DLK2Q6UY11 383 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 ERO1BQ86YB8 467 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 MAPKAPK5Q8IW41 473 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 ARMC5Q96C12 935 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 PRMT6Q96LA8 375 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-228ENST00000511676 CCDC17Q96LX7 622 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 TCEANC2Q96MN5 208 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 GBP4Q96PP9 640 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 ZSCAN10Q96SZ4 725 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-228ENST00000511676 MKNK2Q9HBH9 465 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 ATP6V1DQ9Y5K8 247 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 TACC3Q9Y6A5 838 aa10.63□□□□□ -0.71
NR1I3-228ENST00000511676 TNKSO95271 1327 aa10.62□□□□□ -0.71
NR1I3-228ENST00000511676 STK36Q9NRP7 1315 aa10.62□□□□□ -0.71
NR1I3-228ENST00000511676 F8W031 263 aaPredicted RBP10.62□□□□□ -0.71
NR1I3-228ENST00000511676 ZBTB43O43298 467 aa10.62□□□□□ -0.71
NR1I3-228ENST00000511676 USP2O75604 605 aaPredicted RBP10.62□□□□□ -0.71
NR1I3-228ENST00000511676 BRD1O95696 1058 aa10.62□□□□□ -0.71
NR1I3-228ENST00000511676 SCRN1Q12765 414 aa10.62□□□□□ -0.71
NR1I3-228ENST00000511676 MOB2Q70IA6 237 aa10.62□□□□□ -0.71
NR1I3-228ENST00000511676 NOL8Q76FK4 1167 aaKnown RBP10.62□□□□□ -0.71
NR1I3-228ENST00000511676 FOXP4Q8IVH2 680 aaPredicted RBP10.62□□□□□ -0.71
NR1I3-228ENST00000511676 FAM177A1Q8N128 213 aaPredicted RBP10.62□□□□□ -0.71
NR1I3-228ENST00000511676 OPTNQ96CV9 577 aa10.62□□□□□ -0.71
NR1I3-228ENST00000511676 TOMM22Q9NS69 142 aa10.62□□□□□ -0.71
NR1I3-228ENST00000511676 ZNF70Q9UC06 446 aaPredicted RBP10.62□□□□□ -0.71
NR1I3-228ENST00000511676 SERPINB13Q9UIV8 391 aa10.62□□□□□ -0.71
NR1I3-228ENST00000511676 SYNPO2Q9UMS6 1093 aa10.62□□□□□ -0.71
NR1I3-228ENST00000511676 SLC12A7Q9Y666 1083 aa10.62□□□□□ -0.71
NR1I3-228ENST00000511676 BAZ2AQ9UIF9 1905 aaKnown RBP10.62□□□□□ -0.71
NR1I3-228ENST00000511676 TSPY2A6NKD2 308 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 RANBP6O60518 1105 aaKnown RBP10.61□□□□□ -0.71
NR1I3-228ENST00000511676 RASA1P20936 1047 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 GJB2P29033 226 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 CDK8P49336 464 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 METAP2P50579 478 aaKnown RBP eCLIP10.61□□□□□ -0.71
NR1I3-228ENST00000511676 PPATQ06203 517 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 IFIT1BQ5T764 474 aaKnown RBP10.61□□□□□ -0.71
NR1I3-228ENST00000511676 NFXL1Q6ZNB6 911 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 ZNF444Q8N0Y2 327 aaPredicted RBP10.61□□□□□ -0.71
NR1I3-228ENST00000511676 ENAHQ8N8S7 591 aaPredicted RBP10.61□□□□□ -0.71
NR1I3-228ENST00000511676 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 NSUN7Q8NE18 718 aaKnown RBP10.61□□□□□ -0.71
NR1I3-228ENST00000511676 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
NR1I3-228ENST00000511676 NEDD1Q8NHV4 660 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 HTATIP2Q9BUP3 242 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 MXD3Q9BW11 206 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 LRRC2Q9BYS8 371 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 DDX4Q9NQI0 724 aaKnown RBP10.61□□□□□ -0.71
NR1I3-228ENST00000511676 RBM28Q9NW13 759 aaKnown RBP10.61□□□□□ -0.71
NR1I3-228ENST00000511676 RBM27Q9P2N5 1060 aaKnown RBP10.61□□□□□ -0.71
NR1I3-228ENST00000511676 PI4KBQ9UBF8 816 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 HERC5Q9UII4 1024 aaKnown RBP10.61□□□□□ -0.71
NR1I3-228ENST00000511676 BRPF3Q9ULD4 1205 aa10.61□□□□□ -0.71
NR1I3-228ENST00000511676 CYP2D7A0A087X1C5 515 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 CCL15-CCL14A0A0B4J2E2 113 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 CLRN2A0PK11 232 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 PTPDC1A2A3K4 754 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 DDX11L8A8MPP1 907 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 CPLX1O14810 134 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 STX6O43752 255 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 TLR2O60603 784 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 TSPY3P0CV98 308 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 TSPY8P0CW00 308 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 CYP2D6P10635 497 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 IFNAR1P17181 557 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 PLCD1P51178 756 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 UBXN2AP68543 259 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 CRHR2Q13324 411 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 CCL15Q16663 113 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 RRP12Q5JTH9 1297 aaKnown RBP10.6□□□□□ -0.71
NR1I3-228ENST00000511676 NBPF12Q5TAG4 269 aaPredicted RBP10.6□□□□□ -0.71
NR1I3-228ENST00000511676 FASTKD5Q7L8L6 764 aaKnown RBP10.6□□□□□ -0.71
NR1I3-228ENST00000511676 CHST3Q7LGC8 479 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 CATIPQ7Z7H3 387 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 ZNF654Q8IZM8 581 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 FAM151AQ8WW52 585 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 WASF1Q92558 559 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 ZNF341Q9BYN7 854 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 FAM198AQ9UFP1 575 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 MYH1P12882 1939 aa10.6□□□□□ -0.71
NR1I3-228ENST00000511676 GOLGA8AA7E2F4 631 aa10.59□□□□□ -0.71
NR1I3-228ENST00000511676 GOLGA6L22H0YM25 854 aa10.59□□□□□ -0.71
NR1I3-228ENST00000511676 ZSCAN22P10073 491 aaPredicted RBP10.59□□□□□ -0.71
NR1I3-228ENST00000511676 SYT1P21579 422 aa10.59□□□□□ -0.71
NR1I3-228ENST00000511676 KIF5BP33176 963 aa10.59□□□□□ -0.71
NR1I3-228ENST00000511676 TFAP4Q01664 338 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms