RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 CEBPZQ03701 1054 aaKnown RBP9.39□□□□□ -0.91
SMAD1-209ENST00000511125 TROAPQ12815 778 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 TATDN1Q6P1N9 297 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 SRBD1Q8N5C6 995 aaKnown RBP9.39□□□□□ -0.91
SMAD1-209ENST00000511125 NSUN7Q8NE18 718 aaKnown RBP9.39□□□□□ -0.91
SMAD1-209ENST00000511125 GPKOWQ92917 476 aaPredicted RBP eCLIP9.39□□□□□ -0.91
SMAD1-209ENST00000511125 OTUD5Q96G74 571 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 L3MBTL3Q96JM7 780 aaPredicted RBP9.39□□□□□ -0.91
SMAD1-209ENST00000511125 SH2B1Q9NRF2 756 aaPredicted RBP9.39□□□□□ -0.91
SMAD1-209ENST00000511125 KCNJ14Q9UNX9 436 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 F5H6K3 240 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 H3BQV1 296 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 USP2O75604 605 aaPredicted RBP9.38□□□□□ -0.91
SMAD1-209ENST00000511125 SLC1A4P43007 532 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 KLRC3Q07444 240 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 IFFO2Q5TF58 517 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 ZNF274Q96GC6 653 aaPredicted RBP9.38□□□□□ -0.91
SMAD1-209ENST00000511125 FBXO28Q9NVF7 368 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 HERC5Q9UII4 1024 aaKnown RBP9.38□□□□□ -0.91
SMAD1-209ENST00000511125 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.38□□□□□ -0.91
SMAD1-209ENST00000511125 TIAM2Q8IVF5 1701 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 PHF20L1A8MW92 1017 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 KLRF2D3W0D1 207 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 PPP1R12BO60237 982 aaPredicted RBP9.38□□□□□ -0.91
SMAD1-209ENST00000511125 CELF2O95319 508 aaKnown RBP9.38□□□□□ -0.91
SMAD1-209ENST00000511125 NCLP19338 710 aaKnown RBP9.38□□□□□ -0.91
SMAD1-209ENST00000511125 MTMR2Q13614 643 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 SUPT20HL1Q3ZLR7 823 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 SLFN13Q68D06 897 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 TMEM179Q6ZVK1 233 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 PAXIP1Q6ZW49 1069 aaPredicted RBP9.38□□□□□ -0.91
SMAD1-209ENST00000511125 CDC37L1Q7L3B6 337 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 AGXT2Q9BYV1 514 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 EHD4Q9H223 541 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 KANSL2Q9H9L4 492 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 GDPD2Q9HCC8 539 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 PICK1Q9NRD5 415 aa9.38□□□□□ -0.91
SMAD1-209ENST00000511125 DDX60LQ5H9U9 1706 aaKnown RBP9.38□□□□□ -0.91
SMAD1-209ENST00000511125 TOP1P11387 765 aaKnown RBP9.37□□□□□ -0.91
SMAD1-209ENST00000511125 FDPSP14324 419 aaKnown RBP9.37□□□□□ -0.91
SMAD1-209ENST00000511125 SYT1P21579 422 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 PNMA8AQ86V59 439 aaPredicted RBP9.37□□□□□ -0.91
SMAD1-209ENST00000511125 IL17RAQ96F46 866 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 VPS54Q9P1Q0 977 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 TMEM232C9JQI7 657 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 PARP1P09874 1014 aaKnown RBP9.37□□□□□ -0.91
SMAD1-209ENST00000511125 HMGCS2P54868 508 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 AKAP17AQ02040 695 aaKnown RBP9.37□□□□□ -0.91
SMAD1-209ENST00000511125 CUL4AQ13619 759 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 VGLL4Q14135 290 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 FAM83BQ5T0W9 1011 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 FKBP1CQ5VVH2 108 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 SGMS1Q86VZ5 419 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 DGKHQ86XP1 1220 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 TMTC2Q8N394 836 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 KIFC2Q96AC6 838 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 CCDC17Q96LX7 622 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 ATRNL1Q5VV63 1379 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 ROBO3Q96MS0 1386 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 NDUFB10O96000 172 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 SSRP1Q08945 709 aaKnown RBP9.37□□□□□ -0.91
SMAD1-209ENST00000511125 DCAF15Q66K64 600 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 KLRG1Q96E93 195 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 UIMC1Q96RL1 719 aa9.37□□□□□ -0.91
SMAD1-209ENST00000511125 DICER1Q9UPY3 1922 aaKnown RBP9.37□□□□□ -0.91
SMAD1-209ENST00000511125 IGSF3O75054 1194 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 PDHBP11177 359 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 PCP11498 1178 aaKnown RBP9.36□□□□□ -0.91
SMAD1-209ENST00000511125 NF2P35240 595 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 SLC35G1Q2M3R5 365 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.36□□□□□ -0.91
SMAD1-209ENST00000511125 ALG1Q9BT22 464 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 MAD2L2Q9UI95 211 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 PSME4Q14997 1843 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 ECM29Q5VYK3 1845 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 USP17L10C9JJH3 530 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 ASNSP08243 561 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 USH1GQ495M9 461 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 CCDC174Q6PII3 467 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 CPLX2Q6PUV4 134 aaKnown RBP9.36□□□□□ -0.91
SMAD1-209ENST00000511125 HEATR3Q7Z4Q2 680 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 COA7Q96BR5 231 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 PIGSQ96S52 555 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
SMAD1-209ENST00000511125 CYTH3O43739 400 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 CPXCR1Q8N123 301 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 ARHGEF10LQ9HCE6 1279 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 ZDHHC9Q9Y397 364 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 CSADQ9Y600 493 aa9.36□□□□□ -0.91
SMAD1-209ENST00000511125 ADAMTS3O15072 1205 aa9.35□□□□□ -0.91
SMAD1-209ENST00000511125 NPM3O75607 178 aaKnown RBP9.35□□□□□ -0.91
SMAD1-209ENST00000511125 YY1P25490 414 aa9.35□□□□□ -0.91
SMAD1-209ENST00000511125 HTRA3P83110 453 aa9.35□□□□□ -0.91
SMAD1-209ENST00000511125 NTRK3Q16288 839 aa9.35□□□□□ -0.91
SMAD1-209ENST00000511125 STX6O43752 255 aa9.35□□□□□ -0.91
SMAD1-209ENST00000511125 PTPRAP18433 802 aa9.35□□□□□ -0.91
SMAD1-209ENST00000511125 GNL2Q13823 731 aaKnown RBP9.35□□□□□ -0.91
SMAD1-209ENST00000511125 GADL1Q6ZQY3 521 aa9.35□□□□□ -0.91
SMAD1-209ENST00000511125 RASGRP4Q8TDF6 673 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms