RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 RNF141Q8WVD5 230 aa8.26□□□□□ -1.09
CHD1-206ENST00000511067 KREMEN1Q96MU8 473 aa8.26□□□□□ -1.09
CHD1-206ENST00000511067 C1GALT1Q9NS00 363 aa8.26□□□□□ -1.09
CHD1-206ENST00000511067 ZMYM5Q9UJ78 669 aa8.26□□□□□ -1.09
CHD1-206ENST00000511067 ANKRD34BA5PLL1 514 aa8.25□□□□□ -1.09
CHD1-206ENST00000511067 IQCA1LA6NCM1 817 aa8.25□□□□□ -1.09
CHD1-206ENST00000511067 HSD3B2P26439 372 aa8.25□□□□□ -1.09
CHD1-206ENST00000511067 ANKRD39Q53RE8 183 aa8.25□□□□□ -1.09
CHD1-206ENST00000511067 NBPF12Q5TAG4 269 aaPredicted RBP8.25□□□□□ -1.09
CHD1-206ENST00000511067 BEND4Q6ZU67 534 aa8.25□□□□□ -1.09
CHD1-206ENST00000511067 THAP3Q8WTV1 239 aaPredicted RBP8.25□□□□□ -1.09
CHD1-206ENST00000511067 VWCEQ96DN2 955 aa8.25□□□□□ -1.09
CHD1-206ENST00000511067 FBXL18Q96ME1 805 aa8.25□□□□□ -1.09
CHD1-206ENST00000511067 FAM83CQ9BQN1 747 aa8.25□□□□□ -1.09
CHD1-206ENST00000511067 KCNF1Q9H3M0 494 aa8.25□□□□□ -1.09
CHD1-206ENST00000511067 C9IYK1 514 aa8.24□□□□□ -1.09
CHD1-206ENST00000511067 CYP7A1P22680 504 aa8.24□□□□□ -1.09
CHD1-206ENST00000511067 CDK5R2Q13319 367 aa8.24□□□□□ -1.09
CHD1-206ENST00000511067 RSPO4Q2I0M5 234 aaPredicted RBP8.24□□□□□ -1.09
CHD1-206ENST00000511067 SLC10A6Q3KNW5 377 aa8.24□□□□□ -1.09
CHD1-206ENST00000511067 C2orf27AQ580R0 203 aa8.24□□□□□ -1.09
CHD1-206ENST00000511067 TDRD10Q5VZ19 366 aaKnown RBP8.24□□□□□ -1.09
CHD1-206ENST00000511067 CCDC144CPQ8IYA2 1237 aa8.24□□□□□ -1.09
CHD1-206ENST00000511067 LILRB2Q8N423 598 aa8.24□□□□□ -1.09
CHD1-206ENST00000511067 SH3TC2Q8TF17 1288 aa8.24□□□□□ -1.09
CHD1-206ENST00000511067 SGSM3Q96HU1 749 aa8.24□□□□□ -1.09
CHD1-206ENST00000511067 HAUS7Q99871 368 aa8.24□□□□□ -1.09
CHD1-206ENST00000511067 DUSP23Q9BVJ7 150 aa8.24□□□□□ -1.09
CHD1-206ENST00000511067 AGRPO00253 132 aa8.23□□□□□ -1.09
CHD1-206ENST00000511067 SSRP1Q08945 709 aaKnown RBP8.23□□□□□ -1.09
CHD1-206ENST00000511067 NFKBIBQ15653 356 aa8.23□□□□□ -1.09
CHD1-206ENST00000511067 NKAPLQ5M9Q1 402 aa8.23□□□□□ -1.09
CHD1-206ENST00000511067 AXDND1Q5T1B0 1012 aaPredicted RBP8.23□□□□□ -1.09
CHD1-206ENST00000511067 EGFLAMQ63HQ2 1017 aa8.23□□□□□ -1.09
CHD1-206ENST00000511067 HEATR6Q6AI08 1181 aaKnown RBP8.23□□□□□ -1.09
CHD1-206ENST00000511067 CDH24Q86UP0 819 aa8.23□□□□□ -1.09
CHD1-206ENST00000511067 TOP6BLQ8N6T0 577 aa8.23□□□□□ -1.09
CHD1-206ENST00000511067 MKRN2Q9H000 416 aaKnown RBP8.23□□□□□ -1.09
CHD1-206ENST00000511067 KLHL25Q9H0H3 589 aa8.23□□□□□ -1.09
CHD1-206ENST00000511067 LGR6Q9HBX8 967 aa8.23□□□□□ -1.09
CHD1-206ENST00000511067 TP53P04637 393 aaPredicted RBP8.22□□□□□ -1.09
CHD1-206ENST00000511067 LONRF2Q1L5Z9 754 aa8.22□□□□□ -1.09
CHD1-206ENST00000511067 SPATC1Q76KD6 591 aa8.22□□□□□ -1.09
CHD1-206ENST00000511067 C7orf61Q8IZ16 206 aa8.22□□□□□ -1.09
CHD1-206ENST00000511067 LRRC47Q8N1G4 583 aaKnown RBP8.22□□□□□ -1.09
CHD1-206ENST00000511067 RIN3Q8TB24 985 aa8.22□□□□□ -1.09
CHD1-206ENST00000511067 GBP3Q9H0R5 595 aa8.22□□□□□ -1.09
CHD1-206ENST00000511067 PRR13Q9NZ81 148 aa8.22□□□□□ -1.09
CHD1-206ENST00000511067 SUSD2Q9UGT4 822 aa8.22□□□□□ -1.09
CHD1-206ENST00000511067 RAXQ9Y2V3 346 aa8.22□□□□□ -1.09
CHD1-206ENST00000511067 KDM2BQ8NHM5 1336 aa8.22□□□□□ -1.09
CHD1-206ENST00000511067 CBFA2T2O43439 604 aa8.21□□□□□ -1.1
CHD1-206ENST00000511067 DIAPH1O60610 1272 aaKnown RBP8.21□□□□□ -1.1
CHD1-206ENST00000511067 CLSTN1O94985 981 aa8.21□□□□□ -1.1
CHD1-206ENST00000511067 EOMESO95936 686 aa8.21□□□□□ -1.1
CHD1-206ENST00000511067 EPHX1P07099 455 aa8.21□□□□□ -1.1
CHD1-206ENST00000511067 TCEAL1Q15170 157 aa8.21□□□□□ -1.1
CHD1-206ENST00000511067 ZC3H12BQ5HYM0 836 aaKnown RBP8.21□□□□□ -1.1
CHD1-206ENST00000511067 C22orf34Q6ZV56 151 aa8.21□□□□□ -1.1
CHD1-206ENST00000511067 APBA2Q99767 749 aa8.21□□□□□ -1.1
CHD1-206ENST00000511067 TMEM260Q9NX78 707 aa8.21□□□□□ -1.1
CHD1-206ENST00000511067 WHRNQ9P202 907 aa8.21□□□□□ -1.1
CHD1-206ENST00000511067 PFDN2Q9UHV9 154 aa8.21□□□□□ -1.1
CHD1-206ENST00000511067 DYRK3O43781 588 aa8.2□□□□□ -1.1
CHD1-206ENST00000511067 ITGB7P26010 798 aa8.2□□□□□ -1.1
CHD1-206ENST00000511067 KIR3DL1P43629 444 aa8.2□□□□□ -1.1
CHD1-206ENST00000511067 AUHQ13825 339 aaKnown RBP8.2□□□□□ -1.1
CHD1-206ENST00000511067 PLEKHG4Q58EX7 1191 aa8.2□□□□□ -1.1
CHD1-206ENST00000511067 DCAF15Q66K64 600 aa8.2□□□□□ -1.1
CHD1-206ENST00000511067 ZAR1Q86SH2 424 aa8.2□□□□□ -1.1
CHD1-206ENST00000511067 HOMER1Q86YM7 354 aa8.2□□□□□ -1.1
CHD1-206ENST00000511067 GATA6Q92908 595 aa8.2□□□□□ -1.1
CHD1-206ENST00000511067 ZNF512BQ96KM6 892 aaPredicted RBP8.2□□□□□ -1.1
CHD1-206ENST00000511067 SPATA9Q9BWV2 254 aa8.2□□□□□ -1.1
CHD1-206ENST00000511067 PRDM5Q9NQX1 630 aaPredicted RBP8.2□□□□□ -1.1
CHD1-206ENST00000511067 GTF2IRD1Q9UHL9 959 aa8.2□□□□□ -1.1
CHD1-206ENST00000511067 TPX2Q9ULW0 747 aaKnown RBP8.2□□□□□ -1.1
CHD1-206ENST00000511067 IGF2BP3O00425 579 aaKnown RBP eCLIP8.19□□□□□ -1.1
CHD1-206ENST00000511067 SHOXO15266 292 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 CDC45O75419 566 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 PPM1BO75688 479 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 FAM87AP0C7U9 286 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 CYP27A1Q02318 531 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 SV2CQ496J9 727 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 OGFOD3Q6PK18 319 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 ZSWIM2Q8NEG5 633 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 APPBP2Q92624 585 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 C7orf69Q9H7B7 122 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 FAM86C1Q9NVL1 165 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 STOML1Q9UBI4 398 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 PCDHB12Q9Y5F1 795 aa8.19□□□□□ -1.1
CHD1-206ENST00000511067 A0A087WZG4 1122 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 ITGA4P13612 1032 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 CD247P20963 164 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 SQSTM1Q13501 440 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 NBPF9Q3BBW0 867 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 CYP27C1Q4G0S4 372 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 ZMYM1Q5SVZ6 1142 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 SFRP5Q5T4F7 317 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 XP32Q5T750 250 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms