RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
DDX41-212ENST00000511040 SH2D4AQ9H788 454 aa16.6■□□□□ 0.25
DDX41-212ENST00000511040 TXNRD2Q9NNW7 524 aa16.6■□□□□ 0.25
DDX41-212ENST00000511040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX41-212ENST00000511040 PTCH2Q9Y6C5 1203 aa16.6■□□□□ 0.25
DDX41-212ENST00000511040 GREB1LQ9C091 1923 aaPredicted RBP16.6■□□□□ 0.25
DDX41-212ENST00000511040 IGKV6D-41A0A0C4DH26 115 aa16.59■□□□□ 0.25
DDX41-212ENST00000511040 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
DDX41-212ENST00000511040 RRP12Q5JTH9 1297 aaKnown RBP16.59■□□□□ 0.25
DDX41-212ENST00000511040 SAMD1Q6SPF0 538 aaPredicted RBP16.59■□□□□ 0.25
DDX41-212ENST00000511040 CEP95Q96GE4 821 aa16.59■□□□□ 0.25
DDX41-212ENST00000511040 NBPF3Q9H094 633 aa16.59■□□□□ 0.25
DDX41-212ENST00000511040 VCPKMTQ9H867 229 aa16.59■□□□□ 0.25
DDX41-212ENST00000511040 TOMM22Q9NS69 142 aa16.59■□□□□ 0.25
DDX41-212ENST00000511040 CLIP2Q9UDT6 1046 aa16.59■□□□□ 0.25
DDX41-212ENST00000511040 ANAPC4Q9UJX5 808 aa16.59■□□□□ 0.25
DDX41-212ENST00000511040 RANBP6O60518 1105 aaKnown RBP16.58■□□□□ 0.24
DDX41-212ENST00000511040 TBC1D10CQ8IV04 446 aa16.58■□□□□ 0.24
DDX41-212ENST00000511040 LRRC47Q8N1G4 583 aaKnown RBP16.58■□□□□ 0.24
DDX41-212ENST00000511040 NEDD1Q8NHV4 660 aa16.58■□□□□ 0.24
DDX41-212ENST00000511040 NYAP2Q9P242 653 aa16.58■□□□□ 0.24
DDX41-212ENST00000511040 RBPJLQ9UBG7 517 aa16.58■□□□□ 0.24
DDX41-212ENST00000511040 MGAMO43451 1857 aa16.58■□□□□ 0.24
DDX41-212ENST00000511040 ZMYM6O95789 1325 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 MYPNQ86TC9 1320 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 TSPY2A6NKD2 308 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 TNPO2O14787 897 aaKnown RBP16.57■□□□□ 0.24
DDX41-212ENST00000511040 NMT2O60551 498 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 PRKCZQ05513 592 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 Q3C1V9 767 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 GPRC5AQ8NFJ5 357 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 LPAR1Q92633 364 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 CHMP4CQ96CF2 233 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 NUP88Q99567 741 aaPredicted RBP16.57■□□□□ 0.24
DDX41-212ENST00000511040 GOPCQ9HD26 462 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 MTMR4Q9NYA4 1195 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 MORF4L1Q9UBU8 362 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 SRRDQ9UH36 339 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 GABRQQ9UN88 632 aa16.57■□□□□ 0.24
DDX41-212ENST00000511040 PLIN4Q96Q06 1357 aa16.56■□□□□ 0.24
DDX41-212ENST00000511040 SPDYE16A6NNV3 312 aaPredicted RBP16.56■□□□□ 0.24
DDX41-212ENST00000511040 ORC4O43929 436 aa16.56■□□□□ 0.24
DDX41-212ENST00000511040 CNMDO75829 334 aa16.56■□□□□ 0.24
DDX41-212ENST00000511040 GNRH1P01148 92 aa16.56■□□□□ 0.24
DDX41-212ENST00000511040 HOXD10P28358 340 aa16.56■□□□□ 0.24
DDX41-212ENST00000511040 FAM83BQ5T0W9 1011 aa16.56■□□□□ 0.24
DDX41-212ENST00000511040 NKX2-3Q8TAU0 364 aa16.56■□□□□ 0.24
DDX41-212ENST00000511040 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
DDX41-212ENST00000511040 DSCC1Q9BVC3 393 aa16.56■□□□□ 0.24
DDX41-212ENST00000511040 MYH4Q9Y623 1939 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 ZNF213O14771 459 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 WDR46O15213 610 aaKnown RBP16.55■□□□□ 0.24
DDX41-212ENST00000511040 FLOT1O75955 427 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 TTLL1O95922 423 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 NDUFB10O96000 172 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 MYCP01106 439 aaPredicted RBP16.55■□□□□ 0.24
DDX41-212ENST00000511040 FGRP09769 529 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 SOX10P56693 466 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 ERVK-9P63128 1117 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 ERVK-24P63145 666 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 COG2Q14746 738 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 AKNAD1Q5T1N1 836 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 RAET1EQ8TD07 263 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 SH3TC2Q8TF17 1288 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 GTF3C2Q8WUA4 911 aaPredicted RBP16.55■□□□□ 0.24
DDX41-212ENST00000511040 IL17RBQ9NRM6 502 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 FBXO28Q9NVF7 368 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 BTBD7Q9P203 1132 aa16.55■□□□□ 0.24
DDX41-212ENST00000511040 NEDD4P46934 1319 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 RAD50Q92878 1312 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 F5H6K3 240 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 FLT3LGP49771 235 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 PTH1RQ03431 593 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 KLRC3Q07444 240 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 SLC9C1Q4G0N8 1177 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 STAG1Q8WVM7 1258 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 COA7Q96BR5 231 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 ATG4CQ96DT6 458 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 PORCNQ9H237 461 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 RABGAP1Q9Y3P9 1069 aa16.54■□□□□ 0.24
DDX41-212ENST00000511040 SGSM2O43147 1006 aa16.53■□□□□ 0.24
DDX41-212ENST00000511040 DSG3P32926 999 aa16.53■□□□□ 0.24
DDX41-212ENST00000511040 PRMT2P55345 433 aa16.53■□□□□ 0.24
DDX41-212ENST00000511040 CCAR1Q8IX12 1150 aaKnown RBP16.53■□□□□ 0.24
DDX41-212ENST00000511040 HOXC10Q9NYD6 342 aa16.53■□□□□ 0.24
DDX41-212ENST00000511040 CTNNA3Q9UI47 895 aa16.53■□□□□ 0.24
DDX41-212ENST00000511040 ISY1Q9ULR0 285 aaKnown RBP16.53■□□□□ 0.24
DDX41-212ENST00000511040 STX8Q9UNK0 236 aa16.53■□□□□ 0.24
DDX41-212ENST00000511040 MTMR7Q9Y216 660 aa16.53■□□□□ 0.24
DDX41-212ENST00000511040 DOCK3Q8IZD9 2030 aa16.53■□□□□ 0.24
DDX41-212ENST00000511040 RLFQ13129 1914 aa16.53■□□□□ 0.24
DDX41-212ENST00000511040 HTTP42858 3142 aa16.52■□□□□ 0.24
DDX41-212ENST00000511040 LAMA4Q16363 1823 aa16.52■□□□□ 0.24
DDX41-212ENST00000511040 IMMTQ16891 758 aaKnown RBP16.52■□□□□ 0.24
DDX41-212ENST00000511040 BMP2KLQ5H9B9 411 aa16.52■□□□□ 0.24
DDX41-212ENST00000511040 WDR78Q5VTH9 848 aa16.52■□□□□ 0.24
DDX41-212ENST00000511040 SLFN13Q68D06 897 aa16.52■□□□□ 0.24
DDX41-212ENST00000511040 LBX2Q6XYB7 198 aa16.52■□□□□ 0.24
DDX41-212ENST00000511040 MKL1Q969V6 931 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms