RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 FANCD2Q9BXW9 1451 aa11.74□□□□□ -0.53
USP53-206ENST00000510737 LCNL1Q6ZST4 164 aa11.73□□□□□ -0.53
USP53-206ENST00000510737 PPP1R16BQ96T49 567 aa11.73□□□□□ -0.53
USP53-206ENST00000510737 PRR36Q9H6K5 1346 aa11.73□□□□□ -0.53
USP53-206ENST00000510737 URB2Q14146 1524 aaKnown RBP11.72□□□□□ -0.53
USP53-206ENST00000510737 CHURC1-FNTBB4DL54 471 aa11.72□□□□□ -0.53
USP53-206ENST00000510737 XPCQ01831 940 aaPredicted RBP11.72□□□□□ -0.53
USP53-206ENST00000510737 TSPYL5Q86VY4 417 aaPredicted RBP11.72□□□□□ -0.53
USP53-206ENST00000510737 FBXO15Q8NCQ5 510 aaPredicted RBP11.72□□□□□ -0.53
USP53-206ENST00000510737 MYLIPQ8WY64 445 aa11.72□□□□□ -0.53
USP53-206ENST00000510737 REV1Q9UBZ9 1251 aa11.72□□□□□ -0.53
USP53-206ENST00000510737 DUSP13Q9UII6 198 aa11.72□□□□□ -0.53
USP53-206ENST00000510737 GRIN3BO60391 1043 aa11.71□□□□□ -0.53
USP53-206ENST00000510737 SLFN12Q8IYM2 578 aa11.71□□□□□ -0.53
USP53-206ENST00000510737 BAHD1Q8TBE0 780 aaPredicted RBP11.71□□□□□ -0.53
USP53-206ENST00000510737 CRELD1Q96HD1 420 aa11.71□□□□□ -0.53
USP53-206ENST00000510737 KRTAP4-9Q9BYQ8 210 aa11.71□□□□□ -0.53
USP53-206ENST00000510737 TRIT1Q9H3H1 467 aaKnown RBP11.71□□□□□ -0.53
USP53-206ENST00000510737 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.54
USP53-206ENST00000510737 ZGLP1P0C6A0 271 aa11.7□□□□□ -0.54
USP53-206ENST00000510737 RAC2P15153 192 aa11.7□□□□□ -0.54
USP53-206ENST00000510737 FAM160A1Q05DH4 1040 aa11.7□□□□□ -0.54
USP53-206ENST00000510737 EGR3Q06889 387 aa11.7□□□□□ -0.54
USP53-206ENST00000510737 TIGD5Q53EQ6 642 aa11.7□□□□□ -0.54
USP53-206ENST00000510737 LRRC56Q8IYG6 542 aaPredicted RBP11.7□□□□□ -0.54
USP53-206ENST00000510737 FBXO27Q8NI29 283 aa11.7□□□□□ -0.54
USP53-206ENST00000510737 RNF141Q8WVD5 230 aa11.7□□□□□ -0.54
USP53-206ENST00000510737 TMEM74Q96NL1 305 aa11.7□□□□□ -0.54
USP53-206ENST00000510737 C19orf44Q9H6X5 657 aa11.7□□□□□ -0.54
USP53-206ENST00000510737 PCDHA11Q9Y5I1 949 aa11.7□□□□□ -0.54
USP53-206ENST00000510737 SHISA3A0PJX4 238 aa11.69□□□□□ -0.54
USP53-206ENST00000510737 KRTAP9-7A8MTY7 169 aa11.69□□□□□ -0.54
USP53-206ENST00000510737 BPNT1O95861 308 aa11.69□□□□□ -0.54
USP53-206ENST00000510737 GARTP22102 1010 aa11.69□□□□□ -0.54
USP53-206ENST00000510737 YARSP54577 528 aaKnown RBP11.69□□□□□ -0.54
USP53-206ENST00000510737 TOX2Q96NM4 488 aa11.69□□□□□ -0.54
USP53-206ENST00000510737 RNF32Q9H0A6 362 aa11.69□□□□□ -0.54
USP53-206ENST00000510737 GPATCH2Q9NW75 528 aa11.69□□□□□ -0.54
USP53-206ENST00000510737 EBF1Q9UH73 591 aa11.69□□□□□ -0.54
USP53-206ENST00000510737 ZNF608Q9ULD9 1512 aaPredicted RBP11.69□□□□□ -0.54
USP53-206ENST00000510737 KRTAP19-4Q3LI73 84 aa11.68□□□□□ -0.54
USP53-206ENST00000510737 RSRP1Q9BUV0 290 aa11.68□□□□□ -0.54
USP53-206ENST00000510737 DCP1AQ9NPI6 582 aaPredicted RBP11.68□□□□□ -0.54
USP53-206ENST00000510737 KLHL3Q9UH77 587 aa11.68□□□□□ -0.54
USP53-206ENST00000510737 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
USP53-206ENST00000510737 HTR3BO95264 441 aa11.67□□□□□ -0.54
USP53-206ENST00000510737 GBP2P32456 591 aaPredicted RBP11.67□□□□□ -0.54
USP53-206ENST00000510737 ANKLE2Q86XL3 938 aa11.67□□□□□ -0.54
USP53-206ENST00000510737 KREMEN1Q96MU8 473 aa11.67□□□□□ -0.54
USP53-206ENST00000510737 EPB41L4BQ9H329 900 aa11.67□□□□□ -0.54
USP53-206ENST00000510737 SORBS3O60504 671 aa11.66□□□□□ -0.54
USP53-206ENST00000510737 VWCEQ96DN2 955 aa11.66□□□□□ -0.54
USP53-206ENST00000510737 KCNH3Q9ULD8 1083 aa11.66□□□□□ -0.54
USP53-206ENST00000510737 CD320Q9NPF0 282 aa11.65□□□□□ -0.54
USP53-206ENST00000510737 CHD1O14646 1710 aa11.64□□□□□ -0.55
USP53-206ENST00000510737 MINDY4BA8MYZ0 360 aa11.64□□□□□ -0.55
USP53-206ENST00000510737 NFIBO00712 420 aa11.64□□□□□ -0.55
USP53-206ENST00000510737 RELL1Q8IUW5 271 aa11.64□□□□□ -0.55
USP53-206ENST00000510737 GOLM1Q8NBJ4 401 aa11.64□□□□□ -0.55
USP53-206ENST00000510737 PDZD8Q8NEN9 1154 aa11.64□□□□□ -0.55
USP53-206ENST00000510737 RBM47A0AV96 593 aaKnown RBP11.63□□□□□ -0.55
USP53-206ENST00000510737 NPIPB6E9PJ23 425 aa11.63□□□□□ -0.55
USP53-206ENST00000510737 ETV2O00321 342 aaPredicted RBP11.63□□□□□ -0.55
USP53-206ENST00000510737 LTKP29376 864 aa11.63□□□□□ -0.55
USP53-206ENST00000510737 REC114Q7Z4M0 266 aa11.63□□□□□ -0.55
USP53-206ENST00000510737 KIF2CQ99661 725 aa11.63□□□□□ -0.55
USP53-206ENST00000510737 COPRSQ9NQ92 184 aa11.63□□□□□ -0.55
USP53-206ENST00000510737 VTI1BQ9UEU0 232 aa11.63□□□□□ -0.55
USP53-206ENST00000510737 MED14OSP0DP75 135 aa11.62□□□□□ -0.55
USP53-206ENST00000510737 TNNI2P48788 182 aa11.62□□□□□ -0.55
USP53-206ENST00000510737 TEKQ02763 1124 aa11.62□□□□□ -0.55
USP53-206ENST00000510737 CCDC74BQ96LY2 380 aa11.62□□□□□ -0.55
USP53-206ENST00000510737 CFTRP13569 1480 aa11.62□□□□□ -0.55
USP53-206ENST00000510737 EIF4G3O43432 1585 aaKnown RBP11.62□□□□□ -0.55
USP53-206ENST00000510737 ZSCAN22P10073 491 aaPredicted RBP11.61□□□□□ -0.55
USP53-206ENST00000510737 MPP2Q14168 576 aa11.61□□□□□ -0.55
USP53-206ENST00000510737 SNAP47Q5SQN1 464 aa11.61□□□□□ -0.55
USP53-206ENST00000510737 ATG14Q6ZNE5 492 aa11.61□□□□□ -0.55
USP53-206ENST00000510737 ASPNQ9BXN1 380 aa11.61□□□□□ -0.55
USP53-206ENST00000510737 TMEM253P0C7T8 217 aa11.6□□□□□ -0.55
USP53-206ENST00000510737 FAM196AQ6ZSG2 479 aa11.6□□□□□ -0.55
USP53-206ENST00000510737 ZSCAN18Q8TBC5 510 aaPredicted RBP11.6□□□□□ -0.55
USP53-206ENST00000510737 KBTBD4Q9NVX7 518 aa11.6□□□□□ -0.55
USP53-206ENST00000510737 ZNF281Q9Y2X9 895 aa11.6□□□□□ -0.55
USP53-206ENST00000510737 IFT140Q96RY7 1462 aa11.59□□□□□ -0.55
USP53-206ENST00000510737 TLR3O15455 904 aaKnown RBP11.59□□□□□ -0.55
USP53-206ENST00000510737 EFEMP2O95967 443 aa11.59□□□□□ -0.55
USP53-206ENST00000510737 FBXL19Q6PCT2 694 aa11.59□□□□□ -0.55
USP53-206ENST00000510737 ERMP1Q7Z2K6 904 aa11.59□□□□□ -0.55
USP53-206ENST00000510737 PHACTR4Q8IZ21 702 aa11.59□□□□□ -0.55
USP53-206ENST00000510737 G6PC3Q9BUM1 346 aa11.59□□□□□ -0.55
USP53-206ENST00000510737 UBOX5O94941 541 aa11.58□□□□□ -0.56
USP53-206ENST00000510737 GLDCP23378 1020 aa11.58□□□□□ -0.56
USP53-206ENST00000510737 NR0B2Q15466 257 aa11.58□□□□□ -0.56
USP53-206ENST00000510737 KCNA10Q16322 511 aa11.58□□□□□ -0.56
USP53-206ENST00000510737 SHISA4Q96DD7 197 aa11.58□□□□□ -0.56
USP53-206ENST00000510737 NOTOA8MTQ0 251 aa11.57□□□□□ -0.56
USP53-206ENST00000510737 GALK1P51570 392 aa11.57□□□□□ -0.56
USP53-206ENST00000510737 DIEXFQ68CQ4 756 aaKnown RBP11.57□□□□□ -0.56
USP53-206ENST00000510737 SIAH1Q8IUQ4 282 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms