RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PARP14Q460N5 1801 aa27.49■■□□□ 1.99
SNF8-209ENST00000510558 CYP2B6P20813 491 aa27.49■■□□□ 1.99
SNF8-209ENST00000510558 TDO2P48775 406 aa27.49■■□□□ 1.99
SNF8-209ENST00000510558 CCNA1P78396 465 aa27.49■■□□□ 1.99
SNF8-209ENST00000510558 PLEKHH3Q7Z736 793 aa27.49■■□□□ 1.99
SNF8-209ENST00000510558 LPAR1Q92633 364 aa27.49■■□□□ 1.99
SNF8-209ENST00000510558 SEC62Q99442 399 aaKnown RBP27.49■■□□□ 1.99
SNF8-209ENST00000510558 TANGO6Q9C0B7 1094 aa27.49■■□□□ 1.99
SNF8-209ENST00000510558 BTBD7Q9P203 1132 aa27.49■■□□□ 1.99
SNF8-209ENST00000510558 A0A0G2JMZ2 1700 aa27.49■■□□□ 1.99
SNF8-209ENST00000510558 APPP05067 770 aa27.48■■□□□ 1.99
SNF8-209ENST00000510558 ZMYM1Q5SVZ6 1142 aa27.48■■□□□ 1.99
SNF8-209ENST00000510558 STK11IPQ8N1F8 1099 aa27.48■■□□□ 1.99
SNF8-209ENST00000510558 VCPKMTQ9H867 229 aa27.48■■□□□ 1.99
SNF8-209ENST00000510558 KANSL2Q9H9L4 492 aa27.48■■□□□ 1.99
SNF8-209ENST00000510558 CWC22Q9HCG8 908 aaKnown RBP27.48■■□□□ 1.99
SNF8-209ENST00000510558 STAP2Q9UGK3 403 aa27.48■■□□□ 1.99
SNF8-209ENST00000510558 PATL2C9JE40 543 aaKnown RBP27.47■■□□□ 1.99
SNF8-209ENST00000510558 SGPL1O95470 568 aa27.47■■□□□ 1.99
SNF8-209ENST00000510558 PDE1AP54750 535 aa27.47■■□□□ 1.99
SNF8-209ENST00000510558 COG2Q14746 738 aa27.47■■□□□ 1.99
SNF8-209ENST00000510558 TRIB2Q92519 343 aa27.47■■□□□ 1.99
SNF8-209ENST00000510558 PAK6Q9NQU5 681 aaPredicted RBP27.47■■□□□ 1.99
SNF8-209ENST00000510558 XRCC5P13010 732 aaKnown RBP27.46■■□□□ 1.99
SNF8-209ENST00000510558 EEF2P13639 858 aaKnown RBP27.46■■□□□ 1.99
SNF8-209ENST00000510558 RASA1P20936 1047 aa27.46■■□□□ 1.99
SNF8-209ENST00000510558 ATP2B2Q01814 1243 aa27.46■■□□□ 1.99
SNF8-209ENST00000510558 TRIM32Q13049 653 aa27.46■■□□□ 1.99
SNF8-209ENST00000510558 MORN1Q5T089 497 aa27.46■■□□□ 1.99
SNF8-209ENST00000510558 IFNL3Q8IZI9 196 aa27.46■■□□□ 1.99
SNF8-209ENST00000510558 SPICE1Q8N0Z3 855 aa27.46■■□□□ 1.99
SNF8-209ENST00000510558 USP6NLQ92738 828 aa27.46■■□□□ 1.99
SNF8-209ENST00000510558 DEFB118Q96PH6 123 aa27.46■■□□□ 1.99
SNF8-209ENST00000510558 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.46■■□□□ 1.99
SNF8-209ENST00000510558 MKNK2Q9HBH9 465 aa27.46■■□□□ 1.99
SNF8-209ENST00000510558 HOXC10Q9NYD6 342 aa27.46■■□□□ 1.99
SNF8-209ENST00000510558 RGS2P41220 211 aa27.45■■□□□ 1.98
SNF8-209ENST00000510558 EXOC6Q8TAG9 804 aa27.45■■□□□ 1.98
SNF8-209ENST00000510558 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.45■■□□□ 1.98
SNF8-209ENST00000510558 RWDD1Q9H446 243 aaPredicted RBP27.45■■□□□ 1.98
SNF8-209ENST00000510558 WDR46O15213 610 aaKnown RBP27.44■■□□□ 1.98
SNF8-209ENST00000510558 WDR78Q5VTH9 848 aa27.44■■□□□ 1.98
SNF8-209ENST00000510558 UBE2Q1Q7Z7E8 422 aa27.44■■□□□ 1.98
SNF8-209ENST00000510558 SMC5Q8IY18 1101 aa27.44■■□□□ 1.98
SNF8-209ENST00000510558 EVI5LQ96CN4 794 aa27.44■■□□□ 1.98
SNF8-209ENST00000510558 NACAP1Q9BZK3 213 aa27.44■■□□□ 1.98
SNF8-209ENST00000510558 LNPKQ9C0E8 428 aa27.44■■□□□ 1.98
SNF8-209ENST00000510558 FLOT1O75955 427 aa27.43■■□□□ 1.98
SNF8-209ENST00000510558 TRMT44Q8IYL2 757 aaKnown RBP27.43■■□□□ 1.98
SNF8-209ENST00000510558 APBA2Q99767 749 aa27.43■■□□□ 1.98
SNF8-209ENST00000510558 MYH4Q9Y623 1939 aa27.43■■□□□ 1.98
SNF8-209ENST00000510558 RPTORQ8N122 1335 aa27.42■■□□□ 1.98
SNF8-209ENST00000510558 COL11A1P12107 1806 aaPredicted RBP27.42■■□□□ 1.98
SNF8-209ENST00000510558 FARP2O94887 1054 aaPredicted RBP27.42■■□□□ 1.98
SNF8-209ENST00000510558 TFRCP02786 760 aaKnown RBP27.42■■□□□ 1.98
SNF8-209ENST00000510558 ZKSCAN1P17029 563 aaPredicted RBP27.42■■□□□ 1.98
SNF8-209ENST00000510558 DSG3P32926 999 aa27.42■■□□□ 1.98
SNF8-209ENST00000510558 MAP2K5Q13163 448 aa27.42■■□□□ 1.98
SNF8-209ENST00000510558 HMX1Q9NP08 348 aaPredicted RBP27.42■■□□□ 1.98
SNF8-209ENST00000510558 CAPN2P17655 700 aa27.41■■□□□ 1.98
SNF8-209ENST00000510558 PTPREP23469 700 aa27.41■■□□□ 1.98
SNF8-209ENST00000510558 CCDC129Q6ZRS4 1044 aa27.41■■□□□ 1.98
SNF8-209ENST00000510558 MB21D1Q8N884 522 aa27.41■■□□□ 1.98
SNF8-209ENST00000510558 CRISPLD2Q9H0B8 497 aa27.41■■□□□ 1.98
SNF8-209ENST00000510558 NAPBQ9H115 298 aa27.41■■□□□ 1.98
SNF8-209ENST00000510558 ZNF287Q9HBT7 754 aa27.41■■□□□ 1.98
SNF8-209ENST00000510558 GOPCQ9HD26 462 aa27.41■■□□□ 1.98
SNF8-209ENST00000510558 IVNS1ABPQ9Y6Y0 642 aa27.41■■□□□ 1.98
SNF8-209ENST00000510558 SLC15A5A6NIM6 579 aa27.4■■□□□ 1.98
SNF8-209ENST00000510558 CCL14Q16627 93 aa27.4■■□□□ 1.98
SNF8-209ENST00000510558 MAP3K21Q5TCX8 1036 aa27.4■■□□□ 1.98
SNF8-209ENST00000510558 B4GALNT3Q6L9W6 998 aa27.4■■□□□ 1.98
SNF8-209ENST00000510558 ATG4CQ96DT6 458 aa27.4■■□□□ 1.98
SNF8-209ENST00000510558 MOV10L1Q9BXT6 1211 aaKnown RBP27.4■■□□□ 1.98
SNF8-209ENST00000510558 SPATC1LQ9H0A9 340 aa27.4■■□□□ 1.98
SNF8-209ENST00000510558 ZNF236Q9UL36 1845 aa27.39■■□□□ 1.98
SNF8-209ENST00000510558 PRDM1O75626 825 aa27.39■■□□□ 1.98
SNF8-209ENST00000510558 IGHDP01880 384 aa27.39■■□□□ 1.98
SNF8-209ENST00000510558 PRKAR2AP13861 404 aaKnown RBP27.39■■□□□ 1.98
SNF8-209ENST00000510558 ZNF444Q8N0Y2 327 aaPredicted RBP27.39■■□□□ 1.98
SNF8-209ENST00000510558 NYAP2Q9P242 653 aa27.39■■□□□ 1.98
SNF8-209ENST00000510558 RAD21O60216 631 aa27.38■■□□□ 1.97
SNF8-209ENST00000510558 GRB14Q14449 540 aa27.38■■□□□ 1.97
SNF8-209ENST00000510558 SAMD1Q6SPF0 538 aaPredicted RBP27.38■■□□□ 1.97
SNF8-209ENST00000510558 IGKV6D-41A0A0C4DH26 115 aa27.37■■□□□ 1.97
SNF8-209ENST00000510558 PPARAQ07869 468 aa27.37■■□□□ 1.97
SNF8-209ENST00000510558 SHCBP1Q8NEM2 672 aa27.37■■□□□ 1.97
SNF8-209ENST00000510558 FBXO28Q9NVF7 368 aa27.37■■□□□ 1.97
SNF8-209ENST00000510558 SUPT16HQ9Y5B9 1047 aaKnown RBP27.37■■□□□ 1.97
SNF8-209ENST00000510558 FOXP2O15409 715 aa27.36■■□□□ 1.97
SNF8-209ENST00000510558 SLC3A2P08195 630 aaKnown RBP27.36■■□□□ 1.97
SNF8-209ENST00000510558 PDE4BQ07343 736 aa27.36■■□□□ 1.97
SNF8-209ENST00000510558 CACNB2Q08289 660 aaPredicted RBP27.36■■□□□ 1.97
SNF8-209ENST00000510558 PLS1Q14651 629 aa27.36■■□□□ 1.97
SNF8-209ENST00000510558 FAM83BQ5T0W9 1011 aa27.36■■□□□ 1.97
SNF8-209ENST00000510558 CHD1LQ86WJ1 897 aa27.36■■□□□ 1.97
SNF8-209ENST00000510558 HTATIP2Q9BUP3 242 aa27.36■■□□□ 1.97
SNF8-209ENST00000510558 ERCC3P19447 782 aa27.35■■□□□ 1.97
SNF8-209ENST00000510558 DPF3Q92784 378 aa27.35■■□□□ 1.97
SNF8-209ENST00000510558 HELLSQ9NRZ9 838 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms