RNA–Protein interactions for RNA: ENST00000509587.1

MBD4-207, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-207ENST00000509587 TSKSQ9UJT2 592 aa20.59■□□□□ 0.89
MBD4-207ENST00000509587 HSPA8P11142 646 aaKnown RBP20.58■□□□□ 0.89
MBD4-207ENST00000509587 CTCFP49711 727 aaPredicted RBP20.58■□□□□ 0.89
MBD4-207ENST00000509587 TRDNQ13061 729 aa20.58■□□□□ 0.89
MBD4-207ENST00000509587 PABPC4Q13310 644 aaKnown RBP eCLIP20.58■□□□□ 0.89
MBD4-207ENST00000509587 TSGA10IPQ3SY00 556 aa20.58■□□□□ 0.89
MBD4-207ENST00000509587 RNF20Q5VTR2 975 aa20.58■□□□□ 0.89
MBD4-207ENST00000509587 RCSD1Q6JBY9 416 aa20.58■□□□□ 0.89
MBD4-207ENST00000509587 KCNB2Q92953 911 aa20.58■□□□□ 0.89
MBD4-207ENST00000509587 ZFYVE28Q9HCC9 887 aa20.58■□□□□ 0.89
MBD4-207ENST00000509587 ADGRA2Q96PE1 1338 aa20.57■□□□□ 0.88
MBD4-207ENST00000509587 TLR2O60603 784 aa20.57■□□□□ 0.88
MBD4-207ENST00000509587 CYP2C8P10632 490 aa20.57■□□□□ 0.88
MBD4-207ENST00000509587 HSPA4P34932 840 aa20.57■□□□□ 0.88
MBD4-207ENST00000509587 NOM1Q5C9Z4 860 aaKnown RBP20.57■□□□□ 0.88
MBD4-207ENST00000509587 NCOA7Q8NI08 942 aa20.57■□□□□ 0.88
MBD4-207ENST00000509587 TTC14Q96N46 770 aa20.57■□□□□ 0.88
MBD4-207ENST00000509587 PARK7Q99497 189 aaKnown RBP20.57■□□□□ 0.88
MBD4-207ENST00000509587 USP26Q9BXU7 913 aa20.57■□□□□ 0.88
MBD4-207ENST00000509587 ASCC2Q9H1I8 757 aaPredicted RBP20.57■□□□□ 0.88
MBD4-207ENST00000509587 GOPCQ9HD26 462 aa20.57■□□□□ 0.88
MBD4-207ENST00000509587 STX8Q9UNK0 236 aa20.57■□□□□ 0.88
MBD4-207ENST00000509587 USP17L15C9J2P7 530 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 USP17L13C9JLJ4 530 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 USP17L11C9JVI0 530 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 USP17L18D6R9N7 530 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 USP17L22D6RA61 530 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 USP17L17D6RBQ6 530 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 USP17L19D6RCP7 530 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 USP17L20D6RJB6 530 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 F5H6K3 240 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 KLRC3Q07444 240 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 USP17L24Q0WX57 530 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 CATSPERGQ6ZRH7 1159 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 CYB5R4Q7L1T6 521 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 IQCA1Q86XH1 822 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 DGKHQ86XP1 1220 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 MB21D2Q8IYB1 491 aaPredicted RBP20.56■□□□□ 0.88
MBD4-207ENST00000509587 RASEFQ8IZ41 740 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 SPICE1Q8N0Z3 855 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 LRRC47Q8N1G4 583 aaKnown RBP20.56■□□□□ 0.88
MBD4-207ENST00000509587 GMCL1P1Q8NEA9 526 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 ANKS1AQ92625 1134 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 ZSCAN10Q96SZ4 725 aaPredicted RBP20.56■□□□□ 0.88
MBD4-207ENST00000509587 ZKSCAN3Q9BRR0 538 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 PNMA3Q9UL41 463 aa20.56■□□□□ 0.88
MBD4-207ENST00000509587 NDUFB10O96000 172 aa20.55■□□□□ 0.88
MBD4-207ENST00000509587 OSBPP22059 807 aa20.55■□□□□ 0.88
MBD4-207ENST00000509587 CCDC178Q5BJE1 867 aa20.55■□□□□ 0.88
MBD4-207ENST00000509587 RALYLQ86SE5 291 aaKnown RBP20.55■□□□□ 0.88
MBD4-207ENST00000509587 RPAP3Q9H6T3 665 aaPredicted RBP20.55■□□□□ 0.88
MBD4-207ENST00000509587 GPR25O00155 361 aa20.54■□□□□ 0.88
MBD4-207ENST00000509587 WDR46O15213 610 aaKnown RBP20.54■□□□□ 0.88
MBD4-207ENST00000509587 TOP1P11387 765 aaKnown RBP20.54■□□□□ 0.88
MBD4-207ENST00000509587 LBX1P52954 281 aa20.54■□□□□ 0.88
MBD4-207ENST00000509587 C8orf34Q49A92 452 aa20.54■□□□□ 0.88
MBD4-207ENST00000509587 C17orf99Q6UX52 265 aa20.54■□□□□ 0.88
MBD4-207ENST00000509587 P2RX7Q99572 595 aaKnown RBP20.54■□□□□ 0.88
MBD4-207ENST00000509587 TMEM47Q9BQJ4 181 aa20.54■□□□□ 0.88
MBD4-207ENST00000509587 ZKSCAN1P17029 563 aaPredicted RBP20.53■□□□□ 0.88
MBD4-207ENST00000509587 ANTXR2P58335 489 aa20.53■□□□□ 0.88
MBD4-207ENST00000509587 IRX3P78415 501 aaPredicted RBP20.53■□□□□ 0.88
MBD4-207ENST00000509587 COL9A3Q14050 684 aaPredicted RBP20.53■□□□□ 0.88
MBD4-207ENST00000509587 ENAHQ8N8S7 591 aaPredicted RBP20.53■□□□□ 0.88
MBD4-207ENST00000509587 UBAC1Q9BSL1 405 aa20.53■□□□□ 0.88
MBD4-207ENST00000509587 TNKSO95271 1327 aa20.53■□□□□ 0.88
MBD4-207ENST00000509587 SEC23AQ15436 765 aa20.52■□□□□ 0.88
MBD4-207ENST00000509587 SLFN13Q68D06 897 aa20.52■□□□□ 0.88
MBD4-207ENST00000509587 POTEEQ6S8J3 1075 aa20.52■□□□□ 0.88
MBD4-207ENST00000509587 SMCR8Q8TEV9 937 aaPredicted RBP20.52■□□□□ 0.88
MBD4-207ENST00000509587 SNX14Q9Y5W7 946 aa20.52■□□□□ 0.88
MBD4-207ENST00000509587 RAD21O60216 631 aa20.51■□□□□ 0.87
MBD4-207ENST00000509587 EIF5BO60841 1220 aaKnown RBP20.51■□□□□ 0.87
MBD4-207ENST00000509587 SEC24BO95487 1268 aa20.51■□□□□ 0.87
MBD4-207ENST00000509587 BCRP11274 1271 aa20.51■□□□□ 0.87
MBD4-207ENST00000509587 GCLCP48506 637 aaPredicted RBP20.51■□□□□ 0.87
MBD4-207ENST00000509587 HERVK_113P62684 666 aa20.51■□□□□ 0.87
MBD4-207ENST00000509587 KRT32Q14532 448 aa20.51■□□□□ 0.87
MBD4-207ENST00000509587 ADCK5Q3MIX3 580 aa20.51■□□□□ 0.87
MBD4-207ENST00000509587 FAM83BQ5T0W9 1011 aa20.51■□□□□ 0.87
MBD4-207ENST00000509587 ZNF296Q8WUU4 475 aaPredicted RBP20.51■□□□□ 0.87
MBD4-207ENST00000509587 GMCL1Q96IK5 515 aa20.51■□□□□ 0.87
MBD4-207ENST00000509587 NUP88Q99567 741 aaPredicted RBP20.51■□□□□ 0.87
MBD4-207ENST00000509587 TANGO6Q9C0B7 1094 aa20.51■□□□□ 0.87
MBD4-207ENST00000509587 CPA4Q9UI42 421 aa20.51■□□□□ 0.87
MBD4-207ENST00000509587 MCM5P33992 734 aa20.5■□□□□ 0.87
MBD4-207ENST00000509587 COG2Q14746 738 aa20.5■□□□□ 0.87
MBD4-207ENST00000509587 LBX2Q6XYB7 198 aa20.5■□□□□ 0.87
MBD4-207ENST00000509587 CHST3Q7LGC8 479 aa20.5■□□□□ 0.87
MBD4-207ENST00000509587 IGDCC4Q8TDY8 1250 aa20.5■□□□□ 0.87
MBD4-207ENST00000509587 NEK1Q96PY6 1258 aa20.5■□□□□ 0.87
MBD4-207ENST00000509587 MTA3Q9BTC8 594 aa20.5■□□□□ 0.87
MBD4-207ENST00000509587 PRDM10Q9NQV6 1147 aa20.5■□□□□ 0.87
MBD4-207ENST00000509587 HOXC10Q9NYD6 342 aa20.5■□□□□ 0.87
MBD4-207ENST00000509587 SPDYE16A6NNV3 312 aaPredicted RBP20.49■□□□□ 0.87
MBD4-207ENST00000509587 IFIT3O14879 490 aaKnown RBP20.49■□□□□ 0.87
MBD4-207ENST00000509587 FKTNO75072 461 aa20.49■□□□□ 0.87
MBD4-207ENST00000509587 MCCP23508 829 aa20.49■□□□□ 0.87
MBD4-207ENST00000509587 SP3Q02447 781 aa20.49■□□□□ 0.87
MBD4-207ENST00000509587 RBPJLQ9UBG7 517 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms