RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 PDXDC2PQ6P474 469 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 TMTC3Q6ZXV5 915 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 UBAC1Q9BSL1 405 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 INCENPQ9NQS7 918 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 SH3GLB2Q9NR46 395 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 COL24A1Q17RW2 1714 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 PRKAB2O43741 272 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 GTPBP6O43824 516 aaPredicted RBP10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 SASH3O75995 380 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 UBE4AQ14139 1066 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 FILIP1LQ4L180 1135 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 TEX35Q5T0J7 233 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 SUSD4Q5VX71 490 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 INTS5Q6P9B9 1019 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 RAD9BQ6WBX8 426 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 ENAHQ8N8S7 591 aaPredicted RBP10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 IQUBQ8NA54 791 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 ANKS1AQ92625 1134 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 ARFGAP3Q9NP61 516 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 CABP5Q9NP86 173 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 CNTNAP5Q8WYK1 1306 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 TULP2O00295 520 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 CAMTA2O94983 1202 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 WHAMMP3Q1A5X7 153 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 USP49Q70CQ1 688 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 IGSF22Q8N9C0 903 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 CDCA7Q9BWT1 371 aaPredicted RBP10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 PARD6BQ9BYG5 372 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 BRMS1Q9HCU9 246 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 RMND1Q9NWS8 449 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 AHDC1Q5TGY3 1603 aaPredicted RBP10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 A0A1W2PQC6 194 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 ADKP55263 362 aaKnown RBP10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 EVA1CP58658 441 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 SLC20A2Q08357 652 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 SBK1Q52WX2 424 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 PPFIBP1Q86W92 1011 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 SYMPKQ92797 1274 aaKnown RBP10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 DHX58Q96C10 678 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 COL4A1P02462 1669 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 XDHP47989 1333 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 GYPCP04921 128 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 RBL2Q08999 1139 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 SF3B3Q15393 1217 aaKnown RBP10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 CATIPQ7Z7H3 387 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 TXLNBQ8N3L3 684 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 EXOC4Q96A65 974 aa10.47□□□□□ -0.73
PDGFRA-208ENST00000509490 MAGEB6P1A0A0J9YX57 407 aa10.46□□□□□ -0.73
PDGFRA-208ENST00000509490 TEX33O43247 280 aa10.46□□□□□ -0.73
PDGFRA-208ENST00000509490 KIF5CO60282 957 aa10.46□□□□□ -0.73
PDGFRA-208ENST00000509490 HOXA7P31268 230 aaPredicted RBP10.46□□□□□ -0.73
PDGFRA-208ENST00000509490 LONP1P36776 959 aaKnown RBP10.46□□□□□ -0.73
PDGFRA-208ENST00000509490 IGHMBP2P38935 993 aaKnown RBP10.46□□□□□ -0.73
PDGFRA-208ENST00000509490 GOLGA8FQ08AF8 430 aa10.46□□□□□ -0.73
PDGFRA-208ENST00000509490 GOLGA8DPQ0D2H9 430 aa10.46□□□□□ -0.73
PDGFRA-208ENST00000509490 KCNB1Q14721 858 aa10.46□□□□□ -0.73
PDGFRA-208ENST00000509490 ZNF658Q5TYW1 1059 aaPredicted RBP10.46□□□□□ -0.73
PDGFRA-208ENST00000509490 C4orf32Q8N8J7 132 aa10.46□□□□□ -0.73
PDGFRA-208ENST00000509490 RPS6KA5O75582 802 aa10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 ARHGAP25P42331 645 aa10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 AMPD2Q01433 879 aa10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 AKAP17AQ02040 695 aaKnown RBP10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 COBLL1Q53SF7 1204 aa10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 SPECC1Q5M775 1068 aa10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 TTC38Q5R3I4 469 aa10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 WDR93Q6P2C0 686 aa10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 TRMT44Q8IYL2 757 aaKnown RBP10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 DAGLBQ8NCG7 672 aa10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 ANKZF1Q9H8Y5 726 aa10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 CCDC87Q9NVE4 849 aa10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 GNL3LQ9NVN8 582 aaKnown RBP10.46□□□□□ -0.74
PDGFRA-208ENST00000509490 HOXD11P31277 338 aaPredicted RBP10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 CHMP4BP1P59074 171 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 ZNF827Q17R98 1081 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 EARS2Q5JPH6 523 aaKnown RBP10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 BEND6Q5SZJ8 279 aaPredicted RBP10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 ADGRA1Q86SQ6 560 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 GRAMD1CQ8IYS0 662 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 SYTL4Q96C24 671 aaPredicted RBP10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 MAGEF1Q9HAY2 307 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 ROBO3Q96MS0 1386 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 TNRC6CQ9HCJ0 1690 aaKnown RBP10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 SOWAHDA6NJG2 315 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 H7C1D1 291 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 CYP7A1P22680 504 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 BCAMP50895 628 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 CHRNDQ07001 517 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 SMC1AQ14683 1233 aaKnown RBP10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 PFKFB3Q16875 520 aaPredicted RBP10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 GALNT17Q6IS24 598 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 CLEC4GQ6UXB4 293 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 CYP26C1Q6V0L0 522 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 PDILTQ8N807 584 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 NOC3LQ8WTT2 800 aaKnown RBP10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 EPSTI1Q96J88 318 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 ST7Q9NRC1 585 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 ABHD10Q9NUJ1 306 aa10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 MYH14Q7Z406 1995 aaKnown RBP10.45□□□□□ -0.74
PDGFRA-208ENST00000509490 M0R2N6 131 aa10.44□□□□□ -0.74
PDGFRA-208ENST00000509490 PIP4K2BP78356 416 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms