RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 RBM27Q9P2N5 1060 aaKnown RBP18.51■□□□□ 0.55
TPM3-219ENST00000509409 SLC15A5A6NIM6 579 aa18.5■□□□□ 0.55
TPM3-219ENST00000509409 PTPREP23469 700 aa18.5■□□□□ 0.55
TPM3-219ENST00000509409 ATP2B2Q01814 1243 aa18.5■□□□□ 0.55
TPM3-219ENST00000509409 MAP3K21Q5TCX8 1036 aa18.5■□□□□ 0.55
TPM3-219ENST00000509409 C12orf60Q5U649 245 aa18.5■□□□□ 0.55
TPM3-219ENST00000509409 MFSD14CQ5VZR4 134 aa18.5■□□□□ 0.55
TPM3-219ENST00000509409 CCDC17Q96LX7 622 aa18.5■□□□□ 0.55
TPM3-219ENST00000509409 PUS7LQ9H0K6 701 aaKnown RBP18.5■□□□□ 0.55
TPM3-219ENST00000509409 C11orf49Q9H6J7 331 aa18.5■□□□□ 0.55
TPM3-219ENST00000509409 OGDHLQ9ULD0 1010 aa18.5■□□□□ 0.55
TPM3-219ENST00000509409 CCND3P30281 292 aaPredicted RBP18.49■□□□□ 0.55
TPM3-219ENST00000509409 ICA1Q05084 483 aa18.49■□□□□ 0.55
TPM3-219ENST00000509409 DCTPP1Q9H773 170 aa18.49■□□□□ 0.55
TPM3-219ENST00000509409 SH2D4AQ9H788 454 aa18.49■□□□□ 0.55
TPM3-219ENST00000509409 CEP290O15078 2479 aa18.48■□□□□ 0.55
TPM3-219ENST00000509409 PLS1Q14651 629 aa18.48■□□□□ 0.55
TPM3-219ENST00000509409 CTR9Q6PD62 1173 aa18.48■□□□□ 0.55
TPM3-219ENST00000509409 C16orf86Q6ZW13 317 aa18.48■□□□□ 0.55
TPM3-219ENST00000509409 DPP9Q86TI2 863 aa18.48■□□□□ 0.55
TPM3-219ENST00000509409 CLEC10AQ8IUN9 316 aa18.48■□□□□ 0.55
TPM3-219ENST00000509409 C7orf61Q8IZ16 206 aa18.48■□□□□ 0.55
TPM3-219ENST00000509409 SPICE1Q8N0Z3 855 aa18.48■□□□□ 0.55
TPM3-219ENST00000509409 SMIM22K7EJ46 135 aa18.47■□□□□ 0.55
TPM3-219ENST00000509409 RAD21O60216 631 aa18.47■□□□□ 0.55
TPM3-219ENST00000509409 FLOT1O75955 427 aa18.47■□□□□ 0.55
TPM3-219ENST00000509409 CNGA1P29973 690 aa18.47■□□□□ 0.55
TPM3-219ENST00000509409 KIAA1755Q5JYT7 1200 aa18.47■□□□□ 0.55
TPM3-219ENST00000509409 SIAH1Q8IUQ4 282 aa18.47■□□□□ 0.55
TPM3-219ENST00000509409 LPAR1Q92633 364 aa18.47■□□□□ 0.55
TPM3-219ENST00000509409 TMX2Q9Y320 296 aa18.47■□□□□ 0.55
TPM3-219ENST00000509409 DSG3P32926 999 aa18.46■□□□□ 0.55
TPM3-219ENST00000509409 TSHZ3Q63HK5 1081 aa18.46■□□□□ 0.55
TPM3-219ENST00000509409 STK11IPQ8N1F8 1099 aa18.46■□□□□ 0.55
TPM3-219ENST00000509409 STRBPQ96SI9 672 aaKnown RBP18.46■□□□□ 0.55
TPM3-219ENST00000509409 MOV10L1Q9BXT6 1211 aaKnown RBP18.46■□□□□ 0.55
TPM3-219ENST00000509409 SPATC1LQ9H0A9 340 aa18.46■□□□□ 0.55
TPM3-219ENST00000509409 VCPKMTQ9H867 229 aa18.46■□□□□ 0.55
TPM3-219ENST00000509409 KANSL2Q9H9L4 492 aa18.46■□□□□ 0.55
TPM3-219ENST00000509409 FLRT1Q9NZU1 646 aa18.46■□□□□ 0.55
TPM3-219ENST00000509409 STAP2Q9UGK3 403 aa18.46■□□□□ 0.55
TPM3-219ENST00000509409 MINDY4BA8MYZ0 360 aa18.45■□□□□ 0.54
TPM3-219ENST00000509409 STRNO43815 780 aa18.45■□□□□ 0.54
TPM3-219ENST00000509409 EEF2P13639 858 aaKnown RBP18.45■□□□□ 0.54
TPM3-219ENST00000509409 MNX1P50219 401 aaPredicted RBP18.45■□□□□ 0.54
TPM3-219ENST00000509409 GRB14Q14449 540 aa18.45■□□□□ 0.54
TPM3-219ENST00000509409 LHX8Q68G74 356 aa18.45■□□□□ 0.54
TPM3-219ENST00000509409 NCAPG2Q86XI2 1143 aa18.45■□□□□ 0.54
TPM3-219ENST00000509409 MB21D1Q8N884 522 aa18.45■□□□□ 0.54
TPM3-219ENST00000509409 KBTBD3Q8NAB2 608 aa18.45■□□□□ 0.54
TPM3-219ENST00000509409 NPLOC4Q8TAT6 608 aa18.45■□□□□ 0.54
TPM3-219ENST00000509409 MKNK2Q9HBH9 465 aa18.45■□□□□ 0.54
TPM3-219ENST00000509409 ARPP21Q9UBL0 812 aaPredicted RBP18.45■□□□□ 0.54
TPM3-219ENST00000509409 ZMYND8Q9ULU4 1186 aaPredicted RBP18.45■□□□□ 0.54
TPM3-219ENST00000509409 NAV1Q8NEY1 1877 aa18.44■□□□□ 0.54
TPM3-219ENST00000509409 RNF113AO15541 343 aaKnown RBP18.44■□□□□ 0.54
TPM3-219ENST00000509409 APPP05067 770 aa18.44■□□□□ 0.54
TPM3-219ENST00000509409 ERCC3P19447 782 aa18.44■□□□□ 0.54
TPM3-219ENST00000509409 ATG4CQ96DT6 458 aa18.44■□□□□ 0.54
TPM3-219ENST00000509409 WDR46O15213 610 aaKnown RBP18.43■□□□□ 0.54
TPM3-219ENST00000509409 HOXC6P09630 235 aa18.43■□□□□ 0.54
TPM3-219ENST00000509409 ADORA2AP29274 412 aa18.43■□□□□ 0.54
TPM3-219ENST00000509409 CYP2C19P33261 490 aa18.43■□□□□ 0.54
TPM3-219ENST00000509409 LRRFIP1Q32MZ4 808 aaKnown RBP18.43■□□□□ 0.54
TPM3-219ENST00000509409 SHCBP1Q8NEM2 672 aa18.43■□□□□ 0.54
TPM3-219ENST00000509409 APPBP2Q92624 585 aa18.43■□□□□ 0.54
TPM3-219ENST00000509409 OSBP2Q969R2 916 aa18.43■□□□□ 0.54
TPM3-219ENST00000509409 GOPCQ9HD26 462 aa18.43■□□□□ 0.54
TPM3-219ENST00000509409 SLC5A4Q9NY91 659 aa18.43■□□□□ 0.54
TPM3-219ENST00000509409 PLXNB2O15031 1838 aa18.43■□□□□ 0.54
TPM3-219ENST00000509409 GSG1L2A8MUP6 293 aa18.42■□□□□ 0.54
TPM3-219ENST00000509409 ZFYP08048 801 aaPredicted RBP18.42■□□□□ 0.54
TPM3-219ENST00000509409 SYN1P17600 705 aa18.42■□□□□ 0.54
TPM3-219ENST00000509409 SBK1Q52WX2 424 aa18.42■□□□□ 0.54
TPM3-219ENST00000509409 GIMAP6Q6P9H5 292 aa18.42■□□□□ 0.54
TPM3-219ENST00000509409 PRO3102Q9H379 93 aa18.42■□□□□ 0.54
TPM3-219ENST00000509409 MROH8Q9H579 483 aa18.42■□□□□ 0.54
TPM3-219ENST00000509409 DDX20Q9UHI6 824 aaKnown RBP18.42■□□□□ 0.54
TPM3-219ENST00000509409 ERC2O15083 957 aa18.41■□□□□ 0.54
TPM3-219ENST00000509409 TDO2P48775 406 aa18.41■□□□□ 0.54
TPM3-219ENST00000509409 ZBTB47Q9UFB7 747 aaPredicted RBP18.41■□□□□ 0.54
TPM3-219ENST00000509409 PCDHB15Q9Y5E8 787 aa18.41■□□□□ 0.54
TPM3-219ENST00000509409 TRIOBPQ9H2D6 2365 aa18.41■□□□□ 0.54
TPM3-219ENST00000509409 DDX60LQ5H9U9 1706 aaKnown RBP18.4■□□□□ 0.54
TPM3-219ENST00000509409 GPAA1O43292 621 aa18.4■□□□□ 0.54
TPM3-219ENST00000509409 MSCO60682 206 aa18.4■□□□□ 0.54
TPM3-219ENST00000509409 COBLO75128 1261 aa18.4■□□□□ 0.54
TPM3-219ENST00000509409 SLC25A27O95847 323 aa18.4■□□□□ 0.54
TPM3-219ENST00000509409 GNAT2P19087 354 aa18.4■□□□□ 0.54
TPM3-219ENST00000509409 TMEM132BQ14DG7 1078 aa18.4■□□□□ 0.54
TPM3-219ENST00000509409 ZNF444Q8N0Y2 327 aaPredicted RBP18.4■□□□□ 0.54
TPM3-219ENST00000509409 SENP6Q9GZR1 1112 aaPredicted RBP18.4■□□□□ 0.54
TPM3-219ENST00000509409 PFASO15067 1338 aa18.4■□□□□ 0.54
TPM3-219ENST00000509409 PATL2C9JE40 543 aaKnown RBP18.39■□□□□ 0.53
TPM3-219ENST00000509409 FCER1AP12319 257 aa18.39■□□□□ 0.53
TPM3-219ENST00000509409 RASA1P20936 1047 aa18.39■□□□□ 0.53
TPM3-219ENST00000509409 FAM83BQ5T0W9 1011 aa18.39■□□□□ 0.53
TPM3-219ENST00000509409 OLFML2BQ68BL8 750 aa18.39■□□□□ 0.53
TPM3-219ENST00000509409 ZNF287Q9HBT7 754 aa18.39■□□□□ 0.53
TPM3-219ENST00000509409 FBXO28Q9NVF7 368 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms