RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 LAMA4Q16363 1823 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 WDR19Q8NEZ3 1342 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 A0A0G2JLL6 359 aaPredicted RBP17.4■□□□□ 0.38
RNF4-213ENST00000509388 CCDC69A6NI79 296 aa17.4■□□□□ 0.38
RNF4-213ENST00000509388 CPA1P15085 419 aa17.4■□□□□ 0.38
RNF4-213ENST00000509388 ANTXR2P58335 489 aa17.4■□□□□ 0.38
RNF4-213ENST00000509388 EXOSC10Q01780 885 aaKnown RBP17.4■□□□□ 0.38
RNF4-213ENST00000509388 KIF23Q02241 960 aaPredicted RBP17.4■□□□□ 0.38
RNF4-213ENST00000509388 OTUD7BQ6GQQ9 843 aa17.4■□□□□ 0.38
RNF4-213ENST00000509388 PRRT2Q7Z6L0 340 aaPredicted RBP17.4■□□□□ 0.38
RNF4-213ENST00000509388 REM2Q8IYK8 340 aaPredicted RBP17.4■□□□□ 0.38
RNF4-213ENST00000509388 ENAHQ8N8S7 591 aaPredicted RBP17.4■□□□□ 0.38
RNF4-213ENST00000509388 ANKS1AQ92625 1134 aa17.4■□□□□ 0.38
RNF4-213ENST00000509388 TCEANC2Q96MN5 208 aa17.4■□□□□ 0.38
RNF4-213ENST00000509388 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
RNF4-213ENST00000509388 VCPKMTQ9H867 229 aa17.4■□□□□ 0.38
RNF4-213ENST00000509388 ISY1Q9ULR0 285 aaKnown RBP17.4■□□□□ 0.38
RNF4-213ENST00000509388 MTMR7Q9Y216 660 aa17.4■□□□□ 0.38
RNF4-213ENST00000509388 F5H6K3 240 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 AOC2O75106 756 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 MAP2K2P36507 400 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 NOVP48745 357 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 KLRC3Q07444 240 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 PABPC4Q13310 644 aaKnown RBP eCLIP17.39■□□□□ 0.37
RNF4-213ENST00000509388 SH3D19Q5HYK7 790 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 SLFN13Q68D06 897 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 SYNE3Q6ZMZ3 975 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 CATIPQ7Z7H3 387 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 PROCA1Q8NCQ7 364 aaPredicted RBP17.39■□□□□ 0.37
RNF4-213ENST00000509388 IGDCC4Q8TDY8 1250 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 LPAR1Q92633 364 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 TBC1D32Q96NH3 1257 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 EMILIN3Q9NT22 766 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 PDRG1Q9NUG6 133 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 DOCK1Q14185 1865 aa17.39■□□□□ 0.37
RNF4-213ENST00000509388 SH2B2O14492 632 aaPredicted RBP17.38■□□□□ 0.37
RNF4-213ENST00000509388 SEC23AQ15436 765 aa17.38■□□□□ 0.37
RNF4-213ENST00000509388 RCSD1Q6JBY9 416 aa17.38■□□□□ 0.37
RNF4-213ENST00000509388 Q6ZUG5 572 aa17.38■□□□□ 0.37
RNF4-213ENST00000509388 SPICE1Q8N0Z3 855 aa17.38■□□□□ 0.37
RNF4-213ENST00000509388 PNMA1Q8ND90 353 aa17.38■□□□□ 0.37
RNF4-213ENST00000509388 GMCL1P1Q8NEA9 526 aa17.38■□□□□ 0.37
RNF4-213ENST00000509388 MS4A4AQ96JQ5 239 aa17.38■□□□□ 0.37
RNF4-213ENST00000509388 MYH8P13535 1937 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 OTOFQ9HC10 1997 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 NDUFB10O96000 172 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 LIFRP42702 1097 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 SLC1A4P43007 532 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 NEK4P51957 841 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 DGKZQ13574 1117 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 BRI3BPQ8WY22 251 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 CHMP4CQ96CF2 233 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 IL17RAQ96F46 866 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 C12orf42Q96LP6 360 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 LY9Q9HBG7 655 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 NAP1L2Q9ULW6 460 aaPredicted RBP17.37■□□□□ 0.37
RNF4-213ENST00000509388 SLC12A7Q9Y666 1083 aa17.37■□□□□ 0.37
RNF4-213ENST00000509388 TESPA1A2RU30 521 aaPredicted RBP17.36■□□□□ 0.37
RNF4-213ENST00000509388 COL9A3Q14050 684 aaPredicted RBP17.36■□□□□ 0.37
RNF4-213ENST00000509388 RABEP1Q15276 862 aa17.36■□□□□ 0.37
RNF4-213ENST00000509388 CCDC96Q2M329 555 aa17.36■□□□□ 0.37
RNF4-213ENST00000509388 NUP133Q8WUM0 1156 aa17.36■□□□□ 0.37
RNF4-213ENST00000509388 GPHNQ9NQX3 736 aaPredicted RBP17.36■□□□□ 0.37
RNF4-213ENST00000509388 AGTPBP1Q9UPW5 1226 aa17.36■□□□□ 0.37
RNF4-213ENST00000509388 USP17L15C9J2P7 530 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 USP17L13C9JLJ4 530 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 USP17L11C9JVI0 530 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 USP17L18D6R9N7 530 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 USP17L22D6RA61 530 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 USP17L17D6RBQ6 530 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 USP17L19D6RCP7 530 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 USP17L20D6RJB6 530 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 WDR46O15213 610 aaKnown RBP17.35■□□□□ 0.37
RNF4-213ENST00000509388 BMP3P12645 472 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 VCAM1P19320 739 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 OSBPP22059 807 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 TM4SF4P48230 202 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 USP17L24Q0WX57 530 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 ANKRD1Q15327 319 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 ANKRD23Q86SG2 305 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 DCAF4Q8WV16 495 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 BRF1Q92994 677 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 ZIC5Q96T25 663 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 TANGO6Q9C0B7 1094 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 RPAP3Q9H6T3 665 aaPredicted RBP17.35■□□□□ 0.37
RNF4-213ENST00000509388 PNMA3Q9UL41 463 aa17.35■□□□□ 0.37
RNF4-213ENST00000509388 BTBD19C9JJ37 291 aa17.34■□□□□ 0.37
RNF4-213ENST00000509388 PDHXO00330 501 aa17.34■□□□□ 0.37
RNF4-213ENST00000509388 ALDH1A1P00352 501 aa17.34■□□□□ 0.37
RNF4-213ENST00000509388 CALM1P0DP23 149 aa17.34■□□□□ 0.37
RNF4-213ENST00000509388 CALM2P0DP24 149 aa17.34■□□□□ 0.37
RNF4-213ENST00000509388 CALM3P0DP25 149 aa17.34■□□□□ 0.37
RNF4-213ENST00000509388 IRX3P78415 501 aaPredicted RBP17.34■□□□□ 0.37
RNF4-213ENST00000509388 IKQ13123 557 aaPredicted RBP17.34■□□□□ 0.37
RNF4-213ENST00000509388 FAM83BQ5T0W9 1011 aa17.34■□□□□ 0.37
RNF4-213ENST00000509388 TREML2Q5T2D2 321 aa17.34■□□□□ 0.37
RNF4-213ENST00000509388 IFNL1Q8IU54 200 aa17.34■□□□□ 0.37
RNF4-213ENST00000509388 GMCL1Q96IK5 515 aa17.34■□□□□ 0.37
RNF4-213ENST00000509388 ATAD5Q96QE3 1844 aa17.34■□□□□ 0.37
RNF4-213ENST00000509388 SENP2Q9HC62 589 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms