RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SLAIN1Q8ND83 568 aa10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 GTF3C2Q8WUA4 911 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 CCDC17Q96LX7 622 aa10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 KIAA1683Q9H0B3 1180 aa10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 SH2D4AQ9H788 454 aa10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 ARHGEF10LQ9HCE6 1279 aa10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 CENPFP49454 3210 aa10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 PARP14Q460N5 1801 aa10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 HTTP42858 3142 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 FGAP02671 866 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 VCAM1P19320 739 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 EN2P19622 333 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 ICA1Q05084 483 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 CTDSPL2Q05D32 466 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 SBK1Q52WX2 424 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 WDR78Q5VTH9 848 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 GIMAP6Q6P9H5 292 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 SAMD1Q6SPF0 538 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 C16orf86Q6ZW13 317 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 TBC1D10CQ8IV04 446 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 ESYT1Q9BSJ8 1104 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 TANGO6Q9C0B7 1094 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 LSG1Q9H089 658 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 RPAP3Q9H6T3 665 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 ZNF287Q9HBT7 754 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 RLFQ13129 1914 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 MYH4Q9Y623 1939 aa10.41□□□□□ -0.74
PDLIM5-213ENST00000509357 ZSWIM8A7E2V4 1837 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 PEX10O60683 326 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 SLC3A2P08195 630 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 ELNP15502 786 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 CCNA1P78396 465 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 ALX1Q15699 326 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 CATSPERGQ6ZRH7 1159 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 TICAM2Q86XR7 235 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 SIAH1Q8IUQ4 282 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 ZNF444Q8N0Y2 327 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 C12orf42Q96LP6 360 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 RNF208Q9H0X6 261 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 NAPBQ9H115 298 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 DIAPH3Q9NSV4 1193 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 RBPJLQ9UBG7 517 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 MORF4L1Q9UBU8 362 aa10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.4□□□□□ -0.74
PDLIM5-213ENST00000509357 A0A1W2PRG0 241 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 PRDM1O75626 825 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 CCL5P13501 91 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 CYP2B6P20813 491 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 RASA1P20936 1047 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 MAPK4P31152 587 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 HAND2P61296 217 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 ERVK-9P63128 1117 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 ERVK-24P63145 666 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 IRF5Q13568 498 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 MTFR1Q15390 333 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 STOX1Q6ZVD7 989 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 SPICE1Q8N0Z3 855 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 KANSL2Q9H9L4 492 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 TXNRD2Q9NNW7 524 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 HOXC10Q9NYD6 342 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 RABGAP1Q9Y3P9 1069 aa10.39□□□□□ -0.75
PDLIM5-213ENST00000509357 ZMYM6O95789 1325 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 NEDD4P46934 1319 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 RAD50Q92878 1312 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 FLOT1O75955 427 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 SEC24BO95487 1268 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 INHAP05111 366 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 EEF2P13639 858 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 PDE4BQ07343 736 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 PPARAQ07869 468 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 COG2Q14746 738 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 Q3C1V9 767 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 KIAA1755Q5JYT7 1200 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 PLEKHH3Q7Z736 793 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 PXYLP1Q8TE99 480 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 LPAR1Q92633 364 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 NUDT12Q9BQG2 462 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 DSCC1Q9BVC3 393 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 GOPCQ9HD26 462 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 ANAPC4Q9UJX5 808 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 TMX2Q9Y320 296 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 IVNS1ABPQ9Y6Y0 642 aa10.38□□□□□ -0.75
PDLIM5-213ENST00000509357 IGKV6D-41A0A0C4DH26 115 aa10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 CDC45O75419 566 aa10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 TFRCP02786 760 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 CYP21A2P08686 494 aa10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 FGRP09769 529 aa10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 PLS1Q14651 629 aa10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 C8orf34Q49A92 452 aa10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 SOCS4Q8WXH5 440 aa10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 MAP4K1Q92918 833 aa10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 UNC93B1Q9H1C4 597 aa10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 PORCNQ9H237 461 aa10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 VCPKMTQ9H867 229 aa10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 ISY1Q9ULR0 285 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-213ENST00000509357 KIAA0100Q14667 2235 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 SPDYE16A6NNV3 312 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 HIP1O00291 1037 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 WDR46O15213 610 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms