RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 VMACQ2NL98 169 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 ADGRF1Q5T601 910 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 RASIP1Q5U651 963 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 PI16Q6UXB8 463 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 NLRX1Q86UT6 975 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 MRPL41Q8IXM3 137 aaKnown RBP4.87□□□□□ -1.63
XRCC4-204ENST00000509268 LINC01599Q8WXQ3 324 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 SRCIN1Q9C0H9 1055 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 SRRDQ9UH36 339 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 CEP131Q9UPN4 1083 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 K7ESM1 405 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 GRK4P32298 578 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 CAP1Q01518 475 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 RTP5Q14D33 572 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 ZNF827Q17R98 1081 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 SLC6A19Q695T7 634 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 FAM129CQ86XR2 697 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 TMEFF1Q8IYR6 380 aa4.87□□□□□ -1.63
XRCC4-204ENST00000509268 OVOL3O00110 214 aa4.86□□□□□ -1.63
XRCC4-204ENST00000509268 PPP1R15AO75807 674 aaPredicted RBP4.86□□□□□ -1.63
XRCC4-204ENST00000509268 VIPR1P32241 457 aa4.86□□□□□ -1.63
XRCC4-204ENST00000509268 PLCB3Q01970 1234 aa4.86□□□□□ -1.63
XRCC4-204ENST00000509268 DNAJB8Q8NHS0 232 aa4.86□□□□□ -1.63
XRCC4-204ENST00000509268 MZB1Q8WU39 189 aa4.86□□□□□ -1.63
XRCC4-204ENST00000509268 RBCK1Q9BYM8 510 aa4.86□□□□□ -1.63
XRCC4-204ENST00000509268 TNFRSF1AP19438 455 aa4.85□□□□□ -1.63
XRCC4-204ENST00000509268 PTPN11Q06124 597 aaPredicted RBP4.85□□□□□ -1.63
XRCC4-204ENST00000509268 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.85□□□□□ -1.63
XRCC4-204ENST00000509268 WIPI1Q5MNZ9 446 aaPredicted RBP4.85□□□□□ -1.63
XRCC4-204ENST00000509268 PCNX4Q63HM2 1172 aa4.85□□□□□ -1.63
XRCC4-204ENST00000509268 B4GALNT3Q6L9W6 998 aa4.85□□□□□ -1.63
XRCC4-204ENST00000509268 DTWD2Q8NBA8 298 aa4.85□□□□□ -1.63
XRCC4-204ENST00000509268 EBF1Q9UH73 591 aa4.85□□□□□ -1.63
XRCC4-204ENST00000509268 ZNF281Q9Y2X9 895 aa4.85□□□□□ -1.63
XRCC4-204ENST00000509268 MAGEA10P43363 369 aaPredicted RBP4.84□□□□□ -1.63
XRCC4-204ENST00000509268 KCNC1P48547 511 aa4.84□□□□□ -1.63
XRCC4-204ENST00000509268 CDR1P51861 262 aa4.84□□□□□ -1.63
XRCC4-204ENST00000509268 TEKQ02763 1124 aa4.84□□□□□ -1.63
XRCC4-204ENST00000509268 TP53I13Q8NBR0 393 aaPredicted RBP4.84□□□□□ -1.63
XRCC4-204ENST00000509268 NOTOA8MTQ0 251 aa4.83□□□□□ -1.64
XRCC4-204ENST00000509268 PRICKLE3O43900 615 aaPredicted RBP4.83□□□□□ -1.64
XRCC4-204ENST00000509268 PNLIPP16233 465 aa4.83□□□□□ -1.64
XRCC4-204ENST00000509268 SIRT2Q8IXJ6 389 aa4.83□□□□□ -1.64
XRCC4-204ENST00000509268 TMEM87BQ96K49 555 aa4.83□□□□□ -1.64
XRCC4-204ENST00000509268 PWWP2AQ96N64 755 aa4.83□□□□□ -1.64
XRCC4-204ENST00000509268 TJP2Q9UDY2 1190 aa4.83□□□□□ -1.64
XRCC4-204ENST00000509268 GFRA2O00451 464 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 NRDCO43847 1150 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 KIR2DL1P43626 348 aaPredicted RBP4.82□□□□□ -1.64
XRCC4-204ENST00000509268 KIR2DL2P43627 348 aaPredicted RBP4.82□□□□□ -1.64
XRCC4-204ENST00000509268 GALK1P51570 392 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 SLC16A11Q8NCK7 471 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 GAL3ST3Q96A11 431 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 SORCS2Q96PQ0 1159 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 G6PC3Q9BUM1 346 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 RBM47A0AV96 593 aaKnown RBP4.82□□□□□ -1.64
XRCC4-204ENST00000509268 RBAK-RBAKDNI3L0D1 243 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 GIPC1O14908 333 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 SLC14A2Q15849 920 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 UBXN11Q5T124 520 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.82□□□□□ -1.64
XRCC4-204ENST00000509268 MCATQ8IVS2 390 aaKnown RBP4.82□□□□□ -1.64
XRCC4-204ENST00000509268 NLGN1Q8N2Q7 840 aa4.82□□□□□ -1.64
XRCC4-204ENST00000509268 GRIN3BO60391 1043 aa4.81□□□□□ -1.64
XRCC4-204ENST00000509268 FBXO24O75426 580 aa4.81□□□□□ -1.64
XRCC4-204ENST00000509268 PGRP06401 933 aa4.81□□□□□ -1.64
XRCC4-204ENST00000509268 SERPINB4P48594 390 aa4.81□□□□□ -1.64
XRCC4-204ENST00000509268 ERVFRD-1P60508 538 aa4.81□□□□□ -1.64
XRCC4-204ENST00000509268 ADAM17P78536 824 aa4.81□□□□□ -1.64
XRCC4-204ENST00000509268 TMEM62Q0P6H9 643 aa4.81□□□□□ -1.64
XRCC4-204ENST00000509268 LDHDQ86WU2 507 aa4.81□□□□□ -1.64
XRCC4-204ENST00000509268 IGDCC3Q8IVU1 814 aa4.81□□□□□ -1.64
XRCC4-204ENST00000509268 C1QTNF3-AMACRE9PGA6 284 aa4.8□□□□□ -1.64
XRCC4-204ENST00000509268 MATN3O15232 486 aa4.8□□□□□ -1.64
XRCC4-204ENST00000509268 SLURP1P55000 103 aa4.8□□□□□ -1.64
XRCC4-204ENST00000509268 PDE4BQ07343 736 aa4.8□□□□□ -1.64
XRCC4-204ENST00000509268 RNF111Q6ZNA4 994 aa4.8□□□□□ -1.64
XRCC4-204ENST00000509268 RNF141Q8WVD5 230 aa4.8□□□□□ -1.64
XRCC4-204ENST00000509268 DPH2Q9BQC3 489 aaPredicted RBP4.8□□□□□ -1.64
XRCC4-204ENST00000509268 ADAM30Q9UKF2 790 aa4.8□□□□□ -1.64
XRCC4-204ENST00000509268 FSHBP01225 129 aa4.79□□□□□ -1.64
XRCC4-204ENST00000509268 MPOP05164 745 aa4.79□□□□□ -1.64
XRCC4-204ENST00000509268 CELA3AP09093 270 aa4.79□□□□□ -1.64
XRCC4-204ENST00000509268 CDK8P49336 464 aa4.79□□□□□ -1.64
XRCC4-204ENST00000509268 SV2BQ7L1I2 683 aa4.79□□□□□ -1.64
XRCC4-204ENST00000509268 HMGA2P52926 109 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 ENOX2Q16206 610 aaKnown RBP4.78□□□□□ -1.64
XRCC4-204ENST00000509268 ENOX1Q8TC92 643 aaKnown RBP4.78□□□□□ -1.64
XRCC4-204ENST00000509268 FBF1Q8TES7 1133 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 CYB5D2Q8WUJ1 264 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 VWCEQ96DN2 955 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 PNMA6FA0A0J9YX94 578 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 FFAR3O14843 346 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 EFEMP2O95967 443 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 PRKCSHP14314 528 aaPredicted RBP4.78□□□□□ -1.64
XRCC4-204ENST00000509268 RPS26P62854 115 aaKnown RBP4.78□□□□□ -1.64
XRCC4-204ENST00000509268 CLEC16AQ2KHT3 1053 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 MAP6Q96JE9 813 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 USP40Q9NVE5 1235 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 KLHL14Q9P2G3 628 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms