RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 PDS5AQ29RF7 1337 aaKnown RBP12.49□□□□□ -0.41
SEC31A-228ENST00000509142 LDHCP07864 332 aa12.49□□□□□ -0.41
SEC31A-228ENST00000509142 FGRP09769 529 aa12.49□□□□□ -0.41
SEC31A-228ENST00000509142 ZNF397Q8NF99 534 aaPredicted RBP12.49□□□□□ -0.41
SEC31A-228ENST00000509142 LEMD3Q9Y2U8 911 aa12.49□□□□□ -0.41
SEC31A-228ENST00000509142 VWA3AA6NCI4 1184 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 SLFN14P0C7P3 912 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 SCG2P13521 617 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 GRAPQ13588 217 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 PIK3AP1Q6ZUJ8 805 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 GRAPLQ8TC17 118 aaPredicted RBP12.48□□□□□ -0.41
SEC31A-228ENST00000509142 FUT2Q10981 343 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 NFIXQ14938 502 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 DIXDC1Q155Q3 683 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 SBK1Q52WX2 424 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 KLHL10Q6JEL2 608 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 HOMER1Q86YM7 354 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 FERMT2Q96AC1 680 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 EPSTI1Q96J88 318 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 NFE2L3Q9Y4A8 694 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 TSPY3P0CV98 308 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 TSPY8P0CW00 308 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 H2AFXP16104 143 aaPredicted RBP12.48□□□□□ -0.41
SEC31A-228ENST00000509142 KCNJ6P48051 423 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 EARS2Q5JPH6 523 aaKnown RBP12.48□□□□□ -0.41
SEC31A-228ENST00000509142 VSTM4Q8IW00 320 aa12.48□□□□□ -0.41
SEC31A-228ENST00000509142 GPR101Q96P66 508 aaPredicted RBP12.48□□□□□ -0.41
SEC31A-228ENST00000509142 TM4SF1P30408 202 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 AMIGO3Q86WK7 504 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 ELOA2Q8IYF1 753 aaPredicted RBP12.47□□□□□ -0.41
SEC31A-228ENST00000509142 TRMT44Q8IYL2 757 aaKnown RBP12.47□□□□□ -0.41
SEC31A-228ENST00000509142 TGFBRAP1Q8WUH2 860 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 SYMPKQ92797 1274 aaKnown RBP12.47□□□□□ -0.41
SEC31A-228ENST00000509142 DYNLL2Q96FJ2 89 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 STX8Q9UNK0 236 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 RREB1Q92766 1687 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 XDHP47989 1333 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 MCM7P33993 719 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 PTGDRQ13258 359 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 CICQ96RK0 1608 aaPredicted RBP12.47□□□□□ -0.41
SEC31A-228ENST00000509142 LAMB2P55268 1798 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 MYO1BO43795 1136 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 TMED8Q6PL24 325 aaPredicted RBP12.47□□□□□ -0.41
SEC31A-228ENST00000509142 PNMA1Q8ND90 353 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 SH3RF3Q8TEJ3 882 aaPredicted RBP12.47□□□□□ -0.41
SEC31A-228ENST00000509142 SAP30BPQ9UHR5 308 aaKnown RBP12.47□□□□□ -0.41
SEC31A-228ENST00000509142 CNTNAP5Q8WYK1 1306 aa12.47□□□□□ -0.41
SEC31A-228ENST00000509142 BCORQ6W2J9 1755 aa12.46□□□□□ -0.41
SEC31A-228ENST00000509142 LTBP4Q8N2S1 1624 aa12.46□□□□□ -0.41
SEC31A-228ENST00000509142 KIF2AO00139 706 aaPredicted RBP12.46□□□□□ -0.41
SEC31A-228ENST00000509142 WNT7AO00755 349 aa12.46□□□□□ -0.41
SEC31A-228ENST00000509142 FNBP4Q8N3X1 1017 aaPredicted RBP12.46□□□□□ -0.41
SEC31A-228ENST00000509142 TRIML1Q8N9V2 468 aa12.46□□□□□ -0.41
SEC31A-228ENST00000509142 RASSF8Q8NHQ8 419 aa12.46□□□□□ -0.41
SEC31A-228ENST00000509142 UFL1O94874 794 aa12.46□□□□□ -0.41
SEC31A-228ENST00000509142 CALML3P27482 149 aa12.46□□□□□ -0.41
SEC31A-228ENST00000509142 TBX2Q13207 712 aaPredicted RBP12.46□□□□□ -0.41
SEC31A-228ENST00000509142 MAPKAPK5Q8IW41 473 aa12.46□□□□□ -0.41
SEC31A-228ENST00000509142 EPC1Q9H2F5 836 aa12.46□□□□□ -0.41
SEC31A-228ENST00000509142 CACNA1SQ13698 1873 aa12.46□□□□□ -0.42
SEC31A-228ENST00000509142 A0A087X0B3 334 aa12.46□□□□□ -0.42
SEC31A-228ENST00000509142 ACTN4O43707 911 aaKnown RBP12.46□□□□□ -0.42
SEC31A-228ENST00000509142 ETF1P62495 437 aaKnown RBP12.46□□□□□ -0.42
SEC31A-228ENST00000509142 NOM1Q5C9Z4 860 aaKnown RBP12.46□□□□□ -0.42
SEC31A-228ENST00000509142 C12orf60Q5U649 245 aa12.46□□□□□ -0.42
SEC31A-228ENST00000509142 DNAI1Q9UI46 699 aa12.46□□□□□ -0.42
SEC31A-228ENST00000509142 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.46□□□□□ -0.422e-19■■□□□ 13.3
SEC31A-228ENST00000509142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
SEC31A-228ENST00000509142 SARSP49591 514 aaKnown RBP12.45□□□□□ -0.42
SEC31A-228ENST00000509142 PFKFB3Q16875 520 aaPredicted RBP12.45□□□□□ -0.42
SEC31A-228ENST00000509142 ZNF287Q9HBT7 754 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 ZNF18P17022 549 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 GNAQP50148 359 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 ST5P78524 1137 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 CCDC178Q5BJE1 867 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 USP17L3A6NCW0 530 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 USP17L4A6NCW7 530 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 CCP110O43303 1012 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 MORC3Q14149 939 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 USP17L1Q7RTZ2 530 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 DGKHQ86XP1 1220 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 ENOX1Q8TC92 643 aaKnown RBP12.45□□□□□ -0.42
SEC31A-228ENST00000509142 STAMQ92783 540 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 GPKOWQ92917 476 aaPredicted RBP eCLIP12.45□□□□□ -0.422e-6■■■□□ 18.2
SEC31A-228ENST00000509142 FHOD1Q9Y613 1164 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 DUOX1Q9NRD9 1551 aa12.45□□□□□ -0.42
SEC31A-228ENST00000509142 COL5A3P25940 1745 aaPredicted RBP12.44□□□□□ -0.42
SEC31A-228ENST00000509142 CCDC194A0A1B0GVG4 234 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 TXLNAP40222 546 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 CLCN6P51797 869 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 STX17P56962 302 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 PARP3Q9Y6F1 533 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 MYH6P13533 1939 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 A0A0U1RQJ8 604 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 CASP1P29466 404 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 TC2NQ8N9U0 490 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 IQUBQ8NA54 791 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 ATRIPQ8WXE1 791 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 WDR24Q96S15 920 aa12.44□□□□□ -0.42
SEC31A-228ENST00000509142 GGA1Q9UJY5 639 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms