RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 SLURP2P0DP57 97 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 IREB2P48200 963 aaKnown RBP12.11□□□□□ -0.47
RFC1-211ENST00000509084 GNAQP50148 359 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 HMGN5P82970 282 aaKnown RBP12.11□□□□□ -0.47
RFC1-211ENST00000509084 SCRN1Q12765 414 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 SEPT2Q15019 361 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 RAB3GAP1Q15042 981 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 SCYL3Q8IZE3 742 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 NUP133Q8WUM0 1156 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 MKL1Q969V6 931 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 KLRG1Q96E93 195 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 WRNIP1Q96S55 665 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 AS3MTQ9HBK9 375 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 SENP2Q9HC62 589 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 NMRK2Q9NPI5 230 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
RFC1-211ENST00000509084 UNCXA6NJT0 531 aa12.1□□□□□ -0.47
RFC1-211ENST00000509084 EEF2P13639 858 aaKnown RBP12.1□□□□□ -0.47
RFC1-211ENST00000509084 PDIA4P13667 645 aaKnown RBP12.1□□□□□ -0.47
RFC1-211ENST00000509084 GUCY1A2P33402 732 aa12.1□□□□□ -0.47
RFC1-211ENST00000509084 CCT2P78371 535 aaKnown RBP12.1□□□□□ -0.47
RFC1-211ENST00000509084 TROAPQ12815 778 aa12.1□□□□□ -0.47
RFC1-211ENST00000509084 PRAMEF18Q5VWM3 479 aa12.1□□□□□ -0.47
RFC1-211ENST00000509084 ARMC9Q7Z3E5 817 aa12.1□□□□□ -0.47
RFC1-211ENST00000509084 NECAB1Q8N987 351 aa12.1□□□□□ -0.47
RFC1-211ENST00000509084 FANCBQ8NB91 859 aa12.1□□□□□ -0.47
RFC1-211ENST00000509084 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.1□□□□□ -0.47
RFC1-211ENST00000509084 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
RFC1-211ENST00000509084 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
RFC1-211ENST00000509084 CLIP2Q9UDT6 1046 aa12.1□□□□□ -0.47
RFC1-211ENST00000509084 SMC3Q9UQE7 1217 aa12.1□□□□□ -0.47
RFC1-211ENST00000509084 PAPPA2Q9BXP8 1791 aa12.1□□□□□ -0.47
RFC1-211ENST00000509084 USP17L5A8MUK1 530 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 FKBP1BP68106 108 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 ATP2B2Q01814 1243 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 RRP1BQ14684 758 aaKnown RBP12.09□□□□□ -0.47
RFC1-211ENST00000509084 GRM4Q14833 912 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 MAP3K11Q16584 847 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 ASPRV1Q53RT3 343 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 MAP1SQ66K74 1059 aaPredicted RBP12.09□□□□□ -0.47
RFC1-211ENST00000509084 GMCL1P1Q8NEA9 526 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 ZNF526Q8TF50 670 aaPredicted RBP12.09□□□□□ -0.47
RFC1-211ENST00000509084 DCAF4Q8WV16 495 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 LZTS2Q9BRK4 669 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
RFC1-211ENST00000509084 GPBP1L1Q9HC44 474 aaPredicted RBP12.09□□□□□ -0.47
RFC1-211ENST00000509084 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 RBM27Q9P2N5 1060 aaKnown RBP12.09□□□□□ -0.47
RFC1-211ENST00000509084 CSADQ9Y600 493 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 STK36Q9NRP7 1315 aa12.09□□□□□ -0.47
RFC1-211ENST00000509084 USP2O75604 605 aaPredicted RBP12.08□□□□□ -0.48
RFC1-211ENST00000509084 PARP1P09874 1014 aaKnown RBP12.08□□□□□ -0.48
RFC1-211ENST00000509084 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 YY1P25490 414 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 INPP5BP32019 993 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 ST3GAL1Q11201 340 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 GPATCH4Q5T3I0 446 aaKnown RBP12.08□□□□□ -0.48
RFC1-211ENST00000509084 TRIM22Q8IYM9 498 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 ANKRD13AQ8IZ07 590 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 LRRC47Q8N1G4 583 aaKnown RBP12.08□□□□□ -0.48
RFC1-211ENST00000509084 NSUN7Q8NE18 718 aaKnown RBP12.08□□□□□ -0.48
RFC1-211ENST00000509084 SMARCC2Q8TAQ2 1214 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 MYL10Q9BUA6 226 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 WDR18Q9BV38 432 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 NCOA5Q9HCD5 579 aaKnown RBP12.08□□□□□ -0.48
RFC1-211ENST00000509084 CIZ1Q9ULV3 898 aaPredicted RBP12.08□□□□□ -0.48
RFC1-211ENST00000509084 TMX2Q9Y320 296 aa12.08□□□□□ -0.48
RFC1-211ENST00000509084 PTPDC1A2A3K4 754 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 SNHG28P0DPA3 235 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 PDHBP11177 359 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 IFNAR1P17181 557 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 RXRAP19793 462 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 PDCP20941 246 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 SMARCA1P28370 1054 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 CDC27P30260 824 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 USP14P54578 494 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 JAG1P78504 1218 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 TTLL12Q14166 644 aaPredicted RBP12.07□□□□□ -0.48
RFC1-211ENST00000509084 TMTC3Q6ZXV5 915 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 RAB11FIP4Q86YS3 637 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 CCDC144CPQ8IYA2 1237 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 FAM184AQ8NB25 1140 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 WASF1Q92558 559 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 GMCL1Q96IK5 515 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 FEZ1Q99689 392 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 RNF26Q9BY78 433 aaPredicted RBP12.07□□□□□ -0.48
RFC1-211ENST00000509084 KIAA1683Q9H0B3 1180 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 OTOFQ9HC10 1997 aa12.07□□□□□ -0.48
RFC1-211ENST00000509084 PALM3A6NDB9 673 aaPredicted RBP12.06□□□□□ -0.48
RFC1-211ENST00000509084 F5H6K3 240 aa12.06□□□□□ -0.48
RFC1-211ENST00000509084 PTPRAP18433 802 aa12.06□□□□□ -0.48
RFC1-211ENST00000509084 GJB2P29033 226 aa12.06□□□□□ -0.48
RFC1-211ENST00000509084 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
RFC1-211ENST00000509084 AKAP17AQ02040 695 aaKnown RBP12.06□□□□□ -0.48
RFC1-211ENST00000509084 KLRC3Q07444 240 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms