RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 TEKT1Q969V4 418 aa10.59□□□□□ -0.71
HTT-205ENST00000509043 CABP5Q9NP86 173 aa10.59□□□□□ -0.71
HTT-205ENST00000509043 RTN4Q9NQC3 1192 aaKnown RBP10.59□□□□□ -0.71
HTT-205ENST00000509043 VPS54Q9P1Q0 977 aa10.59□□□□□ -0.71
HTT-205ENST00000509043 FOCADQ5VW36 1801 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 PALM3A6NDB9 673 aaPredicted RBP10.58□□□□□ -0.72
HTT-205ENST00000509043 SMIM22K7EJ46 135 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 NEMFO60524 1076 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 HLA-DOAP06340 250 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 PLCD1P51178 756 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 ZNF75DP51815 510 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 TERF1P54274 439 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 ORC2Q13416 577 aaPredicted RBP10.58□□□□□ -0.72
HTT-205ENST00000509043 STRIP1Q5VSL9 837 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 ARL6IP4Q66PJ3 421 aaKnown RBP10.58□□□□□ -0.72
HTT-205ENST00000509043 KRBA2Q6ZNG9 492 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 C2CD5Q86YS7 1000 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 CMTR1Q8N1G2 835 aaKnown RBP10.58□□□□□ -0.72
HTT-205ENST00000509043 CNNM3Q8NE01 707 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 GPR101Q96P66 508 aaPredicted RBP10.58□□□□□ -0.72
HTT-205ENST00000509043 TMEM47Q9BQJ4 181 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 TRIM5Q9C035 493 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 EHD4Q9H223 541 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 STK32BQ9NY57 414 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 DACH1Q9UI36 760 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 MAD2L2Q9UI95 211 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 MYH6P13533 1939 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 SNED1Q8TER0 1413 aa10.58□□□□□ -0.72
HTT-205ENST00000509043 LAD1O00515 517 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 NMT2O60551 498 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 ATP2C1P98194 919 aaPredicted RBP10.57□□□□□ -0.72
HTT-205ENST00000509043 PLCB2Q00722 1185 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 GABPAQ06546 454 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 SEMA3FQ13275 785 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 NR5A1Q13285 461 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 NPY5RQ15761 445 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 TTC38Q5R3I4 469 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 NT5DC1Q5TFE4 455 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 OLFM4Q6UX06 510 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 C11orf57Q6ZUT1 292 aaPredicted RBP10.57□□□□□ -0.72
HTT-205ENST00000509043 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 DYNLL2Q96FJ2 89 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 CCDC17Q96LX7 622 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 ZDHHC15Q96MV8 337 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 DHX36Q9H2U1 1008 aaKnown RBP10.57□□□□□ -0.72
HTT-205ENST00000509043 PCDHA4Q9UN74 947 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 STX8Q9UNK0 236 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 TTF2Q9UNY4 1162 aaKnown RBP10.57□□□□□ -0.72
HTT-205ENST00000509043 PCDHB6Q9Y5E3 794 aa10.57□□□□□ -0.72
HTT-205ENST00000509043 COL11A2P13942 1736 aaPredicted RBP10.56□□□□□ -0.72
HTT-205ENST00000509043 CDK5RAP2Q96SN8 1893 aa10.56□□□□□ -0.72
HTT-205ENST00000509043 UBE2Q2LH0YL09 131 aa10.56□□□□□ -0.72
HTT-205ENST00000509043 OFD1O75665 1012 aa10.56□□□□□ -0.72
HTT-205ENST00000509043 SMC2O95347 1197 aa10.56□□□□□ -0.72
HTT-205ENST00000509043 PARP1P09874 1014 aaKnown RBP10.56□□□□□ -0.72
HTT-205ENST00000509043 GNA11P29992 359 aa10.56□□□□□ -0.72
HTT-205ENST00000509043 SLC15A2Q16348 729 aa10.56□□□□□ -0.72
HTT-205ENST00000509043 ASPRV1Q53RT3 343 aa10.56□□□□□ -0.72
HTT-205ENST00000509043 DHX40Q8IX18 779 aaKnown RBP10.56□□□□□ -0.72
HTT-205ENST00000509043 BLIDQ8IZY5 108 aa10.56□□□□□ -0.72
HTT-205ENST00000509043 BARHL2Q9NY43 387 aa10.56□□□□□ -0.72
HTT-205ENST00000509043 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.56□□□□□ -0.72
HTT-205ENST00000509043 SAP30BPQ9UHR5 308 aaKnown RBP10.56□□□□□ -0.72
HTT-205ENST00000509043 SERPINB13Q9UIV8 391 aa10.56□□□□□ -0.72
HTT-205ENST00000509043 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.56□□□□□ -0.72
HTT-205ENST00000509043 IGKV6D-41A0A0C4DH26 115 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 ESYT2A0FGR8 921 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 USP17L3A6NCW0 530 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 USP17L4A6NCW7 530 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 KLRF2D3W0D1 207 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 RIMBP2O15034 1052 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 LONP1P36776 959 aaKnown RBP10.55□□□□□ -0.72
HTT-205ENST00000509043 MAPK8IP2Q13387 824 aaPredicted RBP10.55□□□□□ -0.72
HTT-205ENST00000509043 USP17L1Q7RTZ2 530 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 CERS5Q8N5B7 392 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 MLKLQ8NB16 471 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 PIBF1Q8WXW3 757 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 ZNF622Q969S3 477 aaKnown RBP eCLIP10.55□□□□□ -0.72
HTT-205ENST00000509043 RRP36Q96EU6 259 aaKnown RBP10.55□□□□□ -0.72
HTT-205ENST00000509043 CLIC6Q96NY7 704 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 IDI2Q9BXS1 227 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 OSBPL5Q9H0X9 879 aaPredicted RBP10.55□□□□□ -0.72
HTT-205ENST00000509043 VPS33BQ9H267 617 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 USP40Q9NVE5 1235 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 IMPACTQ9P2X3 320 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 SEC63Q9UGP8 760 aaKnown RBP10.55□□□□□ -0.72
HTT-205ENST00000509043 SERPINA10Q9UK55 444 aa10.55□□□□□ -0.72
HTT-205ENST00000509043 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
HTT-205ENST00000509043 MYH1P12882 1939 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 CCDC194A0A1B0GVG4 234 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 M0R2N6 131 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 AP5Z1O43299 807 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 CBFA2T2O43439 604 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 TTLL1O95922 423 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 SLFN14P0C7P3 912 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 TXLNAP40222 546 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 PRPHP41219 470 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 GSDMDP57764 484 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 MDM2Q00987 491 aaPredicted RBP10.54□□□□□ -0.72
HTT-205ENST00000509043 EVX2Q03828 476 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms