RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
PDPN-208ENST00000509009 CLEC10AQ8IUN9 316 aa15.03■□□□□ -0
PDPN-208ENST00000509009 AMOTL1Q8IY63 956 aa15.03■□□□□ -0
PDPN-208ENST00000509009 KBTBD3Q8NAB2 608 aa15.03■□□□□ -0
PDPN-208ENST00000509009 DIS3LQ8TF46 1054 aaKnown RBP15.03■□□□□ -0
PDPN-208ENST00000509009 DDRGK1Q96HY6 314 aa15.03■□□□□ -0
PDPN-208ENST00000509009 CWC22Q9HCG8 908 aaKnown RBP15.03■□□□□ -0
PDPN-208ENST00000509009 OGDHLQ9ULD0 1010 aa15.03■□□□□ -0
PDPN-208ENST00000509009 GSG1L2A8MUP6 293 aa15.02■□□□□ -0
PDPN-208ENST00000509009 RNF113AO15541 343 aaKnown RBP15.02■□□□□ -0
PDPN-208ENST00000509009 EVI5O60447 810 aa15.02■□□□□ -0
PDPN-208ENST00000509009 FXR1P51114 621 aaKnown RBP eCLIP15.02■□□□□ -0
PDPN-208ENST00000509009 SBK1Q52WX2 424 aa15.02■□□□□ -0
PDPN-208ENST00000509009 WDR78Q5VTH9 848 aa15.02■□□□□ -0
PDPN-208ENST00000509009 TSHZ3Q63HK5 1081 aa15.02■□□□□ -0
PDPN-208ENST00000509009 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
PDPN-208ENST00000509009 OSBP2Q969R2 916 aa15.02■□□□□ -0
PDPN-208ENST00000509009 APBA2Q99767 749 aa15.02■□□□□ -0
PDPN-208ENST00000509009 ARHGEF10LQ9HCE6 1279 aa15.02■□□□□ -0
PDPN-208ENST00000509009 DDX60LQ5H9U9 1706 aaKnown RBP15.02□□□□□ -0.01
PDPN-208ENST00000509009 RANBP2P49792 3224 aaKnown RBP15.02□□□□□ -0.01
PDPN-208ENST00000509009 HOXC6P09630 235 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 EEF2P13639 858 aaKnown RBP15.01□□□□□ -0.01
PDPN-208ENST00000509009 CCND3P30281 292 aaPredicted RBP15.01□□□□□ -0.01
PDPN-208ENST00000509009 DSG3P32926 999 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 ICA1Q05084 483 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 LHX8Q68G74 356 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 SPICE1Q8N0Z3 855 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 LPAR1Q92633 364 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 GPATCH3Q96I76 525 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 MOV10L1Q9BXT6 1211 aaKnown RBP15.01□□□□□ -0.01
PDPN-208ENST00000509009 TANGO6Q9C0B7 1094 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 NBPF3Q9H094 633 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 VCPKMTQ9H867 229 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 KANSL2Q9H9L4 492 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 FLRT1Q9NZU1 646 aa15.01□□□□□ -0.01
PDPN-208ENST00000509009 NAV1Q8NEY1 1877 aa15□□□□□ -0.01
PDPN-208ENST00000509009 STRNO43815 780 aa15□□□□□ -0.01
PDPN-208ENST00000509009 GRB14Q14449 540 aa15□□□□□ -0.01
PDPN-208ENST00000509009 GIMAP6Q6P9H5 292 aa15□□□□□ -0.01
PDPN-208ENST00000509009 APPBP2Q92624 585 aa15□□□□□ -0.01
PDPN-208ENST00000509009 GNL3Q9BVP2 549 aaKnown RBP eCLIP15□□□□□ -0.01
PDPN-208ENST00000509009 PRO3102Q9H379 93 aa15□□□□□ -0.01
PDPN-208ENST00000509009 SH2D4AQ9H788 454 aa15□□□□□ -0.01
PDPN-208ENST00000509009 RBM27Q9P2N5 1060 aaKnown RBP15□□□□□ -0.01
PDPN-208ENST00000509009 IVNS1ABPQ9Y6Y0 642 aa15□□□□□ -0.01
PDPN-208ENST00000509009 FLOT1O75955 427 aa14.99□□□□□ -0.01
PDPN-208ENST00000509009 IGHA2P01877 340 aa14.99□□□□□ -0.01
PDPN-208ENST00000509009 ZFYP08048 801 aaPredicted RBP14.99□□□□□ -0.01
PDPN-208ENST00000509009 ATP2B2Q01814 1243 aa14.99□□□□□ -0.01
PDPN-208ENST00000509009 MFSD14CQ5VZR4 134 aa14.99□□□□□ -0.01
PDPN-208ENST00000509009 MB21D1Q8N884 522 aa14.99□□□□□ -0.01
PDPN-208ENST00000509009 SHCBP1Q8NEM2 672 aa14.99□□□□□ -0.01
PDPN-208ENST00000509009 NPLOC4Q8TAT6 608 aa14.99□□□□□ -0.01
PDPN-208ENST00000509009 SPATC1LQ9H0A9 340 aa14.99□□□□□ -0.01
PDPN-208ENST00000509009 ARPP21Q9UBL0 812 aaPredicted RBP14.99□□□□□ -0.01
PDPN-208ENST00000509009 BAZ2AQ9UIF9 1905 aaKnown RBP14.98□□□□□ -0.01
PDPN-208ENST00000509009 MINDY4BA8MYZ0 360 aa14.98□□□□□ -0.01
PDPN-208ENST00000509009 WDR46O15213 610 aaKnown RBP14.98□□□□□ -0.01
PDPN-208ENST00000509009 ERCC3P19447 782 aa14.98□□□□□ -0.01
PDPN-208ENST00000509009 RASA1P20936 1047 aa14.98□□□□□ -0.01
PDPN-208ENST00000509009 OTUD7AQ8TE49 926 aaPredicted RBP14.98□□□□□ -0.01
PDPN-208ENST00000509009 ATG4CQ96DT6 458 aa14.98□□□□□ -0.01
PDPN-208ENST00000509009 C11orf49Q9H6J7 331 aa14.98□□□□□ -0.01
PDPN-208ENST00000509009 ADAMTS5Q9UNA0 930 aa14.98□□□□□ -0.01
PDPN-208ENST00000509009 TTC41PQ6P2S7 1318 aa14.97□□□□□ -0.01
PDPN-208ENST00000509009 PATL2C9JE40 543 aaKnown RBP14.97□□□□□ -0.01
PDPN-208ENST00000509009 GPAA1O43292 621 aa14.97□□□□□ -0.01
PDPN-208ENST00000509009 COBLO75128 1261 aa14.97□□□□□ -0.01
PDPN-208ENST00000509009 COL6A1P12109 1028 aa14.97□□□□□ -0.01
PDPN-208ENST00000509009 CYP2C19P33261 490 aa14.97□□□□□ -0.01
PDPN-208ENST00000509009 RRP1P56182 461 aaKnown RBP14.97□□□□□ -0.01
PDPN-208ENST00000509009 DPP9Q86TI2 863 aa14.97□□□□□ -0.01
PDPN-208ENST00000509009 STK11IPQ8N1F8 1099 aa14.97□□□□□ -0.01
PDPN-208ENST00000509009 PI4K2BQ8TCG2 481 aa14.97□□□□□ -0.01
PDPN-208ENST00000509009 MROH8Q9H579 483 aa14.97□□□□□ -0.01
PDPN-208ENST00000509009 MKNK2Q9HBH9 465 aa14.97□□□□□ -0.01
PDPN-208ENST00000509009 M0R2C6 588 aa14.96□□□□□ -0.01
PDPN-208ENST00000509009 ERC2O15083 957 aa14.96□□□□□ -0.01
PDPN-208ENST00000509009 APPP05067 770 aa14.96□□□□□ -0.01
PDPN-208ENST00000509009 GNAT2P19087 354 aa14.96□□□□□ -0.01
PDPN-208ENST00000509009 ADORA2AP29274 412 aa14.96□□□□□ -0.01
PDPN-208ENST00000509009 PLS1Q14651 629 aa14.96□□□□□ -0.01
PDPN-208ENST00000509009 TMEM132BQ14DG7 1078 aa14.96□□□□□ -0.01
PDPN-208ENST00000509009 LRRFIP1Q32MZ4 808 aaKnown RBP14.96□□□□□ -0.01
PDPN-208ENST00000509009 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
PDPN-208ENST00000509009 TRPV1Q8NER1 839 aa14.96□□□□□ -0.01
PDPN-208ENST00000509009 SEC62Q99442 399 aaKnown RBP14.96□□□□□ -0.01
PDPN-208ENST00000509009 EPB41L4AQ9HCS5 686 aaPredicted RBP14.96□□□□□ -0.01
PDPN-208ENST00000509009 FBXO28Q9NVF7 368 aa14.96□□□□□ -0.01
PDPN-208ENST00000509009 NYAP2Q9P242 653 aa14.96□□□□□ -0.01
PDPN-208ENST00000509009 STAP2Q9UGK3 403 aa14.96□□□□□ -0.01
PDPN-208ENST00000509009 OLFML2BQ68BL8 750 aa14.95□□□□□ -0.02
PDPN-208ENST00000509009 NCAPG2Q86XI2 1143 aa14.95□□□□□ -0.02
PDPN-208ENST00000509009 IFNL3Q8IZI9 196 aa14.95□□□□□ -0.02
PDPN-208ENST00000509009 ABRAQ8N0Z2 381 aa14.95□□□□□ -0.02
PDPN-208ENST00000509009 CRBNQ96SW2 442 aa14.95□□□□□ -0.02
PDPN-208ENST00000509009 GOPCQ9HD26 462 aa14.95□□□□□ -0.02
PDPN-208ENST00000509009 RLFQ13129 1914 aa14.95□□□□□ -0.02
PDPN-208ENST00000509009 PFASO15067 1338 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms