RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 EPB41L4AQ9HCS5 686 aaPredicted RBP26.46■■□□□ 1.83
PACRGL-220ENST00000508952 CEP290O15078 2479 aa26.45■■□□□ 1.83
PACRGL-220ENST00000508952 SALL3Q9BXA9 1300 aa26.45■■□□□ 1.83
PACRGL-220ENST00000508952 MINDY4BA8MYZ0 360 aa26.45■■□□□ 1.82
PACRGL-220ENST00000508952 FARP2O94887 1054 aaPredicted RBP26.45■■□□□ 1.82
PACRGL-220ENST00000508952 TFRCP02786 760 aaKnown RBP26.45■■□□□ 1.82
PACRGL-220ENST00000508952 CCNA1P78396 465 aa26.45■■□□□ 1.82
PACRGL-220ENST00000508952 SBK1Q52WX2 424 aa26.45■■□□□ 1.82
PACRGL-220ENST00000508952 MORN1Q5T089 497 aa26.45■■□□□ 1.82
PACRGL-220ENST00000508952 WDR78Q5VTH9 848 aa26.45■■□□□ 1.82
PACRGL-220ENST00000508952 GIMAP6Q6P9H5 292 aa26.45■■□□□ 1.82
PACRGL-220ENST00000508952 SEC62Q99442 399 aaKnown RBP26.45■■□□□ 1.82
PACRGL-220ENST00000508952 TMX2Q9Y320 296 aa26.45■■□□□ 1.82
PACRGL-220ENST00000508952 A0A0G2JMZ2 1700 aa26.45■■□□□ 1.82
PACRGL-220ENST00000508952 GREB1LQ9C091 1923 aaPredicted RBP26.44■■□□□ 1.82
PACRGL-220ENST00000508952 ATP2B2Q01814 1243 aa26.44■■□□□ 1.82
PACRGL-220ENST00000508952 SH2D4AQ9H788 454 aa26.44■■□□□ 1.82
PACRGL-220ENST00000508952 ZBTB47Q9UFB7 747 aaPredicted RBP26.44■■□□□ 1.82
PACRGL-220ENST00000508952 PARP14Q460N5 1801 aa26.44■■□□□ 1.82
PACRGL-220ENST00000508952 XRCC5P13010 732 aaKnown RBP26.43■■□□□ 1.82
PACRGL-220ENST00000508952 EEF2P13639 858 aaKnown RBP26.43■■□□□ 1.82
PACRGL-220ENST00000508952 HDAC1Q13547 482 aaPredicted RBP26.43■■□□□ 1.82
PACRGL-220ENST00000508952 COG2Q14746 738 aa26.43■■□□□ 1.82
PACRGL-220ENST00000508952 CCL14Q16627 93 aa26.43■■□□□ 1.82
PACRGL-220ENST00000508952 LRRFIP1Q32MZ4 808 aaKnown RBP26.43■■□□□ 1.82
PACRGL-220ENST00000508952 LPAR1Q92633 364 aa26.43■■□□□ 1.82
PACRGL-220ENST00000508952 VCPKMTQ9H867 229 aa26.43■■□□□ 1.82
PACRGL-220ENST00000508952 APPP05067 770 aa26.42■■□□□ 1.82
PACRGL-220ENST00000508952 GNAT2P19087 354 aa26.42■■□□□ 1.82
PACRGL-220ENST00000508952 RGS2P41220 211 aa26.42■■□□□ 1.82
PACRGL-220ENST00000508952 TDO2P48775 406 aa26.42■■□□□ 1.82
PACRGL-220ENST00000508952 GCC1Q96CN9 775 aa26.42■■□□□ 1.82
PACRGL-220ENST00000508952 KANSL2Q9H9L4 492 aa26.42■■□□□ 1.82
PACRGL-220ENST00000508952 HMX1Q9NP08 348 aaPredicted RBP26.42■■□□□ 1.82
PACRGL-220ENST00000508952 ROBO3Q96MS0 1386 aa26.42■■□□□ 1.82
PACRGL-220ENST00000508952 RPTORQ8N122 1335 aa26.41■■□□□ 1.82
PACRGL-220ENST00000508952 SLC34A2O95436 690 aa26.41■■□□□ 1.82
PACRGL-220ENST00000508952 PRKAR2AP13861 404 aaKnown RBP26.41■■□□□ 1.82
PACRGL-220ENST00000508952 ZKSCAN1P17029 563 aaPredicted RBP26.41■■□□□ 1.82
PACRGL-220ENST00000508952 RASA1P20936 1047 aa26.41■■□□□ 1.82
PACRGL-220ENST00000508952 DPF3Q92784 378 aa26.41■■□□□ 1.82
PACRGL-220ENST00000508952 APBA2Q99767 749 aa26.41■■□□□ 1.82
PACRGL-220ENST00000508952 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.41■■□□□ 1.82
PACRGL-220ENST00000508952 CRISPLD2Q9H0B8 497 aa26.41■■□□□ 1.82
PACRGL-220ENST00000508952 HOXC10Q9NYD6 342 aa26.41■■□□□ 1.82
PACRGL-220ENST00000508952 FLOT1O75955 427 aa26.4■■□□□ 1.82
PACRGL-220ENST00000508952 MAP2K5Q13163 448 aa26.4■■□□□ 1.82
PACRGL-220ENST00000508952 ZMYM1Q5SVZ6 1142 aa26.4■■□□□ 1.82
PACRGL-220ENST00000508952 SAMD1Q6SPF0 538 aaPredicted RBP26.4■■□□□ 1.82
PACRGL-220ENST00000508952 MKNK2Q9HBH9 465 aa26.4■■□□□ 1.82
PACRGL-220ENST00000508952 PATL2C9JE40 543 aaKnown RBP26.39■■□□□ 1.82
PACRGL-220ENST00000508952 H0YGN5 161 aa26.39■■□□□ 1.82
PACRGL-220ENST00000508952 WDR46O15213 610 aaKnown RBP26.39■■□□□ 1.82
PACRGL-220ENST00000508952 PTPREP23469 700 aa26.39■■□□□ 1.82
PACRGL-220ENST00000508952 MAP3K21Q5TCX8 1036 aa26.39■■□□□ 1.82
PACRGL-220ENST00000508952 TRMT44Q8IYL2 757 aaKnown RBP26.39■■□□□ 1.82
PACRGL-220ENST00000508952 IFNL3Q8IZI9 196 aa26.39■■□□□ 1.82
PACRGL-220ENST00000508952 ATG4CQ96DT6 458 aa26.39■■□□□ 1.82
PACRGL-220ENST00000508952 MOV10L1Q9BXT6 1211 aaKnown RBP26.39■■□□□ 1.82
PACRGL-220ENST00000508952 COL11A1P12107 1806 aaPredicted RBP26.38■■□□□ 1.81
PACRGL-220ENST00000508952 SLC15A5A6NIM6 579 aa26.38■■□□□ 1.81
PACRGL-220ENST00000508952 RAD21O60216 631 aa26.38■■□□□ 1.81
PACRGL-220ENST00000508952 DSG3P32926 999 aa26.38■■□□□ 1.81
PACRGL-220ENST00000508952 CACNB2Q08289 660 aaPredicted RBP26.38■■□□□ 1.81
PACRGL-220ENST00000508952 HTATIP2Q9BUP3 242 aa26.38■■□□□ 1.81
PACRGL-220ENST00000508952 IVNS1ABPQ9Y6Y0 642 aa26.38■■□□□ 1.81
PACRGL-220ENST00000508952 PRDM1O75626 825 aa26.37■■□□□ 1.81
PACRGL-220ENST00000508952 PDE1AP54750 535 aa26.37■■□□□ 1.81
PACRGL-220ENST00000508952 DIS3LQ8TF46 1054 aaKnown RBP26.37■■□□□ 1.81
PACRGL-220ENST00000508952 SPATC1LQ9H0A9 340 aa26.37■■□□□ 1.81
PACRGL-220ENST00000508952 STAP2Q9UGK3 403 aa26.37■■□□□ 1.81
PACRGL-220ENST00000508952 MYH4Q9Y623 1939 aa26.36■■□□□ 1.81
PACRGL-220ENST00000508952 GRB14Q14449 540 aa26.36■■□□□ 1.81
PACRGL-220ENST00000508952 PLS1Q14651 629 aa26.36■■□□□ 1.81
PACRGL-220ENST00000508952 CCDC129Q6ZRS4 1044 aa26.36■■□□□ 1.81
PACRGL-220ENST00000508952 MB21D1Q8N884 522 aa26.36■■□□□ 1.81
PACRGL-220ENST00000508952 PAWRQ96IZ0 340 aaKnown RBP26.36■■□□□ 1.81
PACRGL-220ENST00000508952 GOPCQ9HD26 462 aa26.36■■□□□ 1.81
PACRGL-220ENST00000508952 FBXO28Q9NVF7 368 aa26.36■■□□□ 1.81
PACRGL-220ENST00000508952 FLRT1Q9NZU1 646 aa26.36■■□□□ 1.81
PACRGL-220ENST00000508952 CAPN2P17655 700 aa26.35■■□□□ 1.81
PACRGL-220ENST00000508952 NACAP1Q9BZK3 213 aa26.35■■□□□ 1.81
PACRGL-220ENST00000508952 ZNF236Q9UL36 1845 aa26.35■■□□□ 1.81
PACRGL-220ENST00000508952 ALPK3Q96L96 1907 aa26.34■■□□□ 1.81
PACRGL-220ENST00000508952 ERCC3P19447 782 aa26.34■■□□□ 1.81
PACRGL-220ENST00000508952 CCND3P30281 292 aaPredicted RBP26.34■■□□□ 1.81
PACRGL-220ENST00000508952 AAMPQ13685 434 aa26.34■■□□□ 1.81
PACRGL-220ENST00000508952 FAM83BQ5T0W9 1011 aa26.34■■□□□ 1.81
PACRGL-220ENST00000508952 EXOC6Q8TAG9 804 aa26.34■■□□□ 1.81
PACRGL-220ENST00000508952 LNPKQ9C0E8 428 aa26.34■■□□□ 1.81
PACRGL-220ENST00000508952 ZNF444Q8N0Y2 327 aaPredicted RBP26.33■■□□□ 1.81
PACRGL-220ENST00000508952 NPLOC4Q8TAT6 608 aa26.33■■□□□ 1.81
PACRGL-220ENST00000508952 EVI5LQ96CN4 794 aa26.33■■□□□ 1.81
PACRGL-220ENST00000508952 NAPBQ9H115 298 aa26.33■■□□□ 1.81
PACRGL-220ENST00000508952 HOXC6P09630 235 aa26.32■■□□□ 1.8
PACRGL-220ENST00000508952 HABP4Q5JVS0 413 aaKnown RBP26.32■■□□□ 1.8
PACRGL-220ENST00000508952 B4GALNT3Q6L9W6 998 aa26.32■■□□□ 1.8
PACRGL-220ENST00000508952 NCAPG2Q86XI2 1143 aa26.32■■□□□ 1.8
PACRGL-220ENST00000508952 ANKLE1Q8NAG6 615 aa26.32■■□□□ 1.8
PACRGL-220ENST00000508952 SHCBP1Q8NEM2 672 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms