RNA–Protein interactions for RNA: ENST00000508948.5

ARRDC3-205, Transcript of arrestin domain containing 3, humanhuman

TSL 4

Gene ARRDC3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-205ENST00000508948 HOXA7P31268 230 aaPredicted RBP10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 USP14P54578 494 aa10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 COL9A3Q14050 684 aaPredicted RBP10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 CATSPERGQ6ZRH7 1159 aa10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 STOX1Q6ZVD7 989 aa10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 LRRC47Q8N1G4 583 aaKnown RBP10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 PARK7Q99497 189 aaKnown RBP10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 NUP88Q99567 741 aaPredicted RBP10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 ARHGAP39Q9C0H5 1083 aa10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 VCPKMTQ9H867 229 aa10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 PCNTO95613 3336 aa10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 ZSWIM8A7E2V4 1837 aa10.02□□□□□ -0.81
ARRDC3-205ENST00000508948 USP17L15C9J2P7 530 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 USP17L13C9JLJ4 530 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 USP17L11C9JVI0 530 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 USP17L18D6R9N7 530 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 USP17L22D6RA61 530 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 USP17L17D6RBQ6 530 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 USP17L19D6RCP7 530 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 USP17L20D6RJB6 530 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 KDM4AO75164 1064 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 BCRP11274 1271 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 SP3Q02447 781 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 USP17L24Q0WX57 530 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 NOM1Q5C9Z4 860 aaKnown RBP10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 KIAA1211Q6ZU35 1233 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 CYB5R4Q7L1T6 521 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 RASGRP2Q7LDG7 609 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 ANKRD13CQ8N6S4 541 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 MKL1Q969V6 931 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 TXNRD2Q9NNW7 524 aa10.01□□□□□ -0.81
ARRDC3-205ENST00000508948 MYH4Q9Y623 1939 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 E7EWF7 191 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 F5H6K3 240 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 SLC27A2O14975 620 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 CNMDO75829 334 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 TTLL1O95922 423 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 NDUFB10O96000 172 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 NOVP48745 357 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 HERVK_113P62684 666 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 IRX3P78415 501 aaPredicted RBP10□□□□□ -0.81
ARRDC3-205ENST00000508948 KLRC3Q07444 240 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 PABPC4Q13310 644 aaKnown RBP eCLIP10□□□□□ -0.81
ARRDC3-205ENST00000508948 NECTIN1Q15223 517 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 Q3C1V9 767 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 FAM83BQ5T0W9 1011 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 CREB3L3Q68CJ9 461 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 SLFN13Q68D06 897 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 RCSD1Q6JBY9 416 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 CASC1Q6TDU7 716 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 SMCR8Q8TEV9 937 aaPredicted RBP10□□□□□ -0.81
ARRDC3-205ENST00000508948 TMEM47Q9BQJ4 181 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 TANGO6Q9C0B7 1094 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 RNF41Q9H4P4 317 aaPredicted RBP10□□□□□ -0.81
ARRDC3-205ENST00000508948 SH2D4AQ9H788 454 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 TCP11L1Q9NUJ3 509 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 FBXO28Q9NVF7 368 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 ZSWIM5Q9P217 1185 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 RBPJLQ9UBG7 517 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 PNMA3Q9UL41 463 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 STX8Q9UNK0 236 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 MTMR7Q9Y216 660 aa10□□□□□ -0.81
ARRDC3-205ENST00000508948 WDR46O15213 610 aaKnown RBP9.99□□□□□ -0.81
ARRDC3-205ENST00000508948 CHST3Q7LGC8 479 aa9.99□□□□□ -0.81
ARRDC3-205ENST00000508948 ESR2Q92731 530 aa9.99□□□□□ -0.81
ARRDC3-205ENST00000508948 PAGR1Q9BTK6 254 aa9.99□□□□□ -0.81
ARRDC3-205ENST00000508948 GOPCQ9HD26 462 aa9.99□□□□□ -0.81
ARRDC3-205ENST00000508948 BTBD7Q9P203 1132 aa9.99□□□□□ -0.81
ARRDC3-205ENST00000508948 GTF3C3Q9Y5Q9 886 aa9.99□□□□□ -0.81
ARRDC3-205ENST00000508948 RLFQ13129 1914 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 SPDYE16A6NNV3 312 aaPredicted RBP9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 PCP11498 1178 aaKnown RBP9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 MCCP23508 829 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 DSG3P32926 999 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 PSMC4P43686 418 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 ANTXR2P58335 489 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 LACTBP83111 547 aaPredicted RBP9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 COG2Q14746 738 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 OTOP1Q7RTM1 612 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 CTU1Q7Z7A3 348 aaKnown RBP9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 RASEFQ8IZ41 740 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 GMCL1P1Q8NEA9 526 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 LPAR1Q92633 364 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 ATG4CQ96DT6 458 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 ERO1AQ96HE7 468 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 TRIM47Q96LD4 638 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 KRT23Q9C075 422 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 MCOLN1Q9GZU1 580 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 SENP2Q9HC62 589 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 TRIM17Q9Y577 477 aa9.98□□□□□ -0.81
ARRDC3-205ENST00000508948 FLOT1O75955 427 aa9.97□□□□□ -0.81
ARRDC3-205ENST00000508948 TOP1P11387 765 aaKnown RBP9.97□□□□□ -0.81
ARRDC3-205ENST00000508948 BMP3P12645 472 aa9.97□□□□□ -0.81
ARRDC3-205ENST00000508948 GCLCP48506 637 aaPredicted RBP9.97□□□□□ -0.81
ARRDC3-205ENST00000508948 SEC23AQ15436 765 aa9.97□□□□□ -0.81
ARRDC3-205ENST00000508948 TTBK2Q6IQ55 1244 aa9.97□□□□□ -0.81
ARRDC3-205ENST00000508948 KCTD1Q719H9 257 aa9.97□□□□□ -0.81
ARRDC3-205ENST00000508948 MB21D2Q8IYB1 491 aaPredicted RBP9.97□□□□□ -0.81
ARRDC3-205ENST00000508948 ENAHQ8N8S7 591 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms