RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 C5P01031 1676 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 LAMB4A4D0S4 1761 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 A0A0A0MRY4 1105 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 RNF225M0QZC1 329 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 PHACTR2O75167 634 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 CYP19A1P11511 503 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 IL6STP40189 918 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 TWISTNBQ3B726 338 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 PLA2G4EQ3MJ16 856 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 CCDC30Q5VVM6 783 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 CEP135Q66GS9 1140 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 DEFB132Q7Z7B7 95 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 NPM2Q86SE8 214 aaKnown RBP7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 NPAS4Q8IUM7 802 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 ZSCAN29Q8IWY8 852 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 DNAJC10Q8IXB1 793 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 FOXD4L4Q8WXT5 416 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 PBX4Q9BYU1 374 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 DZANK1Q9NVP4 752 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 COL5A3P25940 1745 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 TJP1Q07157 1748 aa7.01□□□□□ -1.29
HMGB1P44-201ENST00000508597 MYH14Q7Z406 1995 aaKnown RBP7□□□□□ -1.29
HMGB1P44-201ENST00000508597 A0A087WZG4 1122 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 VAMP4O75379 141 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 DEAF1O75398 565 aaPredicted RBP7□□□□□ -1.29
HMGB1P44-201ENST00000508597 RPS6KA4O75676 772 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 CDC25BP30305 580 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 CHRNA4P43681 627 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 CRKLP46109 303 aaKnown RBP7□□□□□ -1.29
HMGB1P44-201ENST00000508597 EHHADHQ08426 723 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 ITPK1Q13572 414 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 COL19A1Q14993 1142 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 SLC15A2Q16348 729 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 ALDH1L2Q3SY69 923 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 TXNDC11Q6PKC3 985 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 SHISA2Q6UWI4 295 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 CD163Q86VB7 1156 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 IL22RA1Q8N6P7 574 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 SNX29Q8TEQ0 813 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 TSR2Q969E8 191 aaKnown RBP7□□□□□ -1.29
HMGB1P44-201ENST00000508597 ZKSCAN3Q9BRR0 538 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 STK31Q9BXU1 1019 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 SH2B1Q9NRF2 756 aaPredicted RBP7□□□□□ -1.29
HMGB1P44-201ENST00000508597 STK32BQ9NY57 414 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 DBF4Q9UBU7 674 aaPredicted RBP7□□□□□ -1.29
HMGB1P44-201ENST00000508597 USP16Q9Y5T5 823 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 C4BP0C0L5 1744 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 QSER1Q2KHR3 1735 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 NUP188Q5SRE5 1749 aa7□□□□□ -1.29
HMGB1P44-201ENST00000508597 ANKRD33BA6NCL7 494 aa6.99□□□□□ -1.29
HMGB1P44-201ENST00000508597 EXOSC9Q06265 439 aaKnown RBP6.99□□□□□ -1.29
HMGB1P44-201ENST00000508597 C8orf58Q8NAV2 365 aa6.99□□□□□ -1.29
HMGB1P44-201ENST00000508597 LINC00116Q8NCU8 138 aa6.99□□□□□ -1.29
HMGB1P44-201ENST00000508597 DDX21Q9NR30 783 aaKnown RBP eCLIP6.99□□□□□ -1.29
HMGB1P44-201ENST00000508597 HYPKQ9NX55 129 aa6.99□□□□□ -1.29
HMGB1P44-201ENST00000508597 UBR3Q6ZT12 1888 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 RBM47A0AV96 593 aaKnown RBP6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 METTL12A8MUP2 240 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 C1QTNF9BB2RNN3 333 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 TM4SF5O14894 197 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 SELPP16109 830 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 EIF2S2P20042 333 aaKnown RBP6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 EIF5P55010 431 aaKnown RBP6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 TRIM28Q13263 835 aaKnown RBP6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 DSC3Q14574 896 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 HGSNATQ68CP4 663 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 INTS5Q6P9B9 1019 aaKnown RBP6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 WFDC8Q8IUA0 241 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 SPACA7Q96KW9 195 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 DMRTB1Q96MA1 342 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 SETDB2Q96T68 719 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 OSMRQ99650 979 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 TFCP2L1Q9NZI6 479 aa6.98□□□□□ -1.29
HMGB1P44-201ENST00000508597 PRAMEF22A3QJZ6 481 aa6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 LINC01387J3KSC0 135 aa6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 ELL2O00472 640 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 EIF1AYO14602 144 aaKnown RBP6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 DDX58O95786 925 aaKnown RBP6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 A1BGP04217 495 aa6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 EPHA1P21709 976 aa6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 SETDB1Q15047 1291 aa6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 KRT24Q2M2I5 525 aa6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 CLEC4GQ6UXB4 293 aa6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 FMR1NBQ8N0W7 255 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 TSPYL6Q8N831 410 aa6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 GALNT11Q8NCW6 608 aa6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 NXPE3Q969Y0 559 aa6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 ALKBH8Q96BT7 664 aaKnown RBP6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 NOP53Q9NZM5 478 aaKnown RBP6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 ZBTB1Q9Y2K1 713 aa6.97□□□□□ -1.29
HMGB1P44-201ENST00000508597 A0A1W2PP55 124 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 ERVV-1B6SEH8 477 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 TREHO43280 583 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 SPATA31C1P0DKV0 1188 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 CANXP27824 592 aaKnown RBP6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 RFC4P35249 363 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 FMR1Q06787 632 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 GPAT2Q6NUI2 795 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 PI16Q6UXB8 463 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 GALNT12Q8IXK2 581 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms