RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 FBXL16Q8N461 479 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 CTCFLQ8NI51 663 aaPredicted RBP12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 ANKS1AQ92625 1134 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 SNX21Q969T3 373 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 ZNF274Q96GC6 653 aaPredicted RBP12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 CLMNQ96JQ2 1002 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 SENP2Q9HC62 589 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 ABT1Q9ULW3 272 aaKnown RBP12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 CCDC196A0A1B0GTZ2 297 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 UNCXA6NJT0 531 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 TRIM75PA6NK02 468 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 K7ELQ4 463 aaPredicted RBP12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 CPLX1O14810 134 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 KIF5BP33176 963 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 USP14P54578 494 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 CCT2P78371 535 aaKnown RBP12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 SPP2Q13103 211 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 IKQ13123 557 aaPredicted RBP12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 RCSD1Q6JBY9 416 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 APOA5Q6Q788 366 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 CCDC144CPQ8IYA2 1237 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 ZNF280CQ8ND82 737 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 OTUD5Q96G74 571 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 MYL10Q9BUA6 226 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 AGXT2Q9BYV1 514 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 TMOD4Q9NZQ9 345 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 TPCN1Q9ULQ1 816 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 SNCAIPQ9Y6H5 919 aa12.87□□□□□ -0.35
BRCC3P1-201ENST00000508559 PARP1P09874 1014 aaKnown RBP12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 RXRAP19793 462 aa12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 PDIA3P30101 505 aaKnown RBP12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 RTN1Q16799 776 aa12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 LDLRAD1Q5T700 205 aa12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 CST9Q5W186 159 aa12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 PAXIP1Q6ZW49 1069 aaPredicted RBP12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 ACER1Q8TDN7 264 aa12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 MKL1Q969V6 931 aa12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 OPTNQ96CV9 577 aa12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 TMX3Q96JJ7 454 aa12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 WDR18Q9BV38 432 aa12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 PAPPA2Q9BXP8 1791 aa12.86□□□□□ -0.35
BRCC3P1-201ENST00000508559 TMEM88BA6NKF7 163 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 F5H6K3 240 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 PFKFB2O60825 505 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 CD2BP2O95400 341 aaKnown RBP12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 ECE1P42892 770 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 SLC1A4P43007 532 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 GNAQP50148 359 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 ZNF157P51786 506 aaPredicted RBP12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 RCAN1P53805 252 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 PPATQ06203 517 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 KLRC3Q07444 240 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 MTMR2Q13614 643 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 PPP2R5BQ15173 497 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 USP17L2Q6R6M4 530 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 CCDC83Q8IWF9 413 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 NECAB1Q8N987 351 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 FANCBQ8NB91 859 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 DCAF4Q8WV16 495 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 RBM28Q9NW13 759 aaKnown RBP12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 SYNPO2Q9UMS6 1093 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 TMX2Q9Y320 296 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 PASKQ96RG2 1323 aa12.85□□□□□ -0.35
BRCC3P1-201ENST00000508559 A0A1W2PRG0 241 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 SPDYE5A6NIY4 337 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 C19orf81C9J6K1 198 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 CDKL5O76039 1030 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 BACE1P56817 501 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 AKAP17AQ02040 695 aaKnown RBP12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 PPIL2Q13356 520 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 ME3Q16798 604 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 ASPRV1Q53RT3 343 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 GADL1Q6ZQY3 521 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 SIAH1Q8IUQ4 282 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 GMCL1P1Q8NEA9 526 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 KIAA1683Q9H0B3 1180 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 VCPKMTQ9H867 229 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 NCOA5Q9HCD5 579 aaKnown RBP12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 GPCPD1Q9NPB8 672 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 DOCK1Q14185 1865 aa12.84□□□□□ -0.35
BRCC3P1-201ENST00000508559 CXCL11O14625 94 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 LARGE1O95461 756 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 NDUFB10O96000 172 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 BMP3P12645 472 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 NOVP48745 357 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 HMGCS2P54868 508 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 EVCP57679 992 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 TROAPQ12815 778 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 MKRN3Q13064 507 aaKnown RBP12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 SNAPC2Q13487 334 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 GRM4Q14833 912 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 GPATCH4Q5T3I0 446 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms