RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TSPYL5Q86VY4 417 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-211ENST00000508531 BAHD1Q8TBE0 780 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-211ENST00000508531 RNF141Q8WVD5 230 aa6.91□□□□□ -1.3
PDLIM5-211ENST00000508531 MINDY4BA8MYZ0 360 aa6.9□□□□□ -1.3
PDLIM5-211ENST00000508531 C1QTNF9P0C862 333 aa6.9□□□□□ -1.3
PDLIM5-211ENST00000508531 CFPP27918 469 aa6.9□□□□□ -1.3
PDLIM5-211ENST00000508531 LTKP29376 864 aa6.9□□□□□ -1.3
PDLIM5-211ENST00000508531 SNAP47Q5SQN1 464 aa6.9□□□□□ -1.3
PDLIM5-211ENST00000508531 SLFN12Q8IYM2 578 aa6.9□□□□□ -1.3
PDLIM5-211ENST00000508531 TOX2Q96NM4 488 aa6.9□□□□□ -1.3
PDLIM5-211ENST00000508531 RSRP1Q9BUV0 290 aa6.9□□□□□ -1.3
PDLIM5-211ENST00000508531 DCP1AQ9NPI6 582 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-211ENST00000508531 PCDHA11Q9Y5I1 949 aa6.9□□□□□ -1.3
PDLIM5-211ENST00000508531 NCAPD3P42695 1498 aa6.9□□□□□ -1.31
PDLIM5-211ENST00000508531 DNAJA2O60884 412 aa6.89□□□□□ -1.31
PDLIM5-211ENST00000508531 HTR3BO95264 441 aa6.89□□□□□ -1.31
PDLIM5-211ENST00000508531 KRT1P04264 644 aa6.89□□□□□ -1.31
PDLIM5-211ENST00000508531 LCE4AQ5TA78 99 aa6.89□□□□□ -1.31
PDLIM5-211ENST00000508531 ANKLE2Q86XL3 938 aa6.89□□□□□ -1.31
PDLIM5-211ENST00000508531 GOLM1Q8NBJ4 401 aa6.89□□□□□ -1.31
PDLIM5-211ENST00000508531 FBXO27Q8NI29 283 aa6.89□□□□□ -1.31
PDLIM5-211ENST00000508531 KREMEN1Q96MU8 473 aa6.89□□□□□ -1.31
PDLIM5-211ENST00000508531 EPB41L4BQ9H329 900 aa6.89□□□□□ -1.31
PDLIM5-211ENST00000508531 PRR36Q9H6K5 1346 aa6.89□□□□□ -1.31
PDLIM5-211ENST00000508531 ZCCHC6Q5VYS8 1495 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 NFIBO00712 420 aa6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 ZGLP1P0C6A0 271 aa6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 PWP1Q13610 501 aa6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 C1QL4Q86Z23 238 aa6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 LRRC56Q8IYG6 542 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 PHACTR4Q8IZ21 702 aa6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 CCDC74BQ96LY2 380 aa6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 KIF2CQ99661 725 aa6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 RNF32Q9H0A6 362 aa6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 C19orf44Q9H6X5 657 aa6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 SP110Q9HB58 689 aa6.88□□□□□ -1.31
PDLIM5-211ENST00000508531 TLR3O15455 904 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-211ENST00000508531 MPP2Q14168 576 aa6.87□□□□□ -1.31
PDLIM5-211ENST00000508531 KRTAP19-4Q3LI73 84 aa6.87□□□□□ -1.31
PDLIM5-211ENST00000508531 REC114Q7Z4M0 266 aa6.87□□□□□ -1.31
PDLIM5-211ENST00000508531 PDZD8Q8NEN9 1154 aa6.87□□□□□ -1.31
PDLIM5-211ENST00000508531 ZSCAN18Q8TBC5 510 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-211ENST00000508531 DCAF1Q9Y4B6 1507 aa6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 SHISA3A0PJX4 238 aa6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 CENPBP07199 599 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 TMEM253P0C7T8 217 aa6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 GARTP22102 1010 aa6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 GBP1P32455 592 aa6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 TIGD5Q53EQ6 642 aa6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 ASPNQ9BXN1 380 aa6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 KBTBD4Q9NVX7 518 aa6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 RIMBP3CA6NJZ7 1639 aa6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 RIMBP3BA6NNM3 1639 aa6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 RIMBP3Q9UFD9 1639 aa6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 BAZ1AQ9NRL2 1556 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-211ENST00000508531 RBM47A0AV96 593 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-211ENST00000508531 CHMP4BP1P59074 171 aa6.85□□□□□ -1.31
PDLIM5-211ENST00000508531 FAM196AQ6ZSG2 479 aa6.85□□□□□ -1.31
PDLIM5-211ENST00000508531 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
PDLIM5-211ENST00000508531 OXR1Q8N573 874 aa6.85□□□□□ -1.31
PDLIM5-211ENST00000508531 DHX38Q92620 1227 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-211ENST00000508531 SYTL4Q96C24 671 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-211ENST00000508531 COPRSQ9NQ92 184 aa6.85□□□□□ -1.31
PDLIM5-211ENST00000508531 ATAD2BQ9ULI0 1458 aa6.85□□□□□ -1.31
PDLIM5-211ENST00000508531 FITM1A5D6W6 292 aa6.84□□□□□ -1.31
PDLIM5-211ENST00000508531 NPIPB6E9PJ23 425 aa6.84□□□□□ -1.31
PDLIM5-211ENST00000508531 ETV2O00321 342 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-211ENST00000508531 TEKQ02763 1124 aa6.84□□□□□ -1.31
PDLIM5-211ENST00000508531 CLEC16AQ2KHT3 1053 aa6.84□□□□□ -1.31
PDLIM5-211ENST00000508531 FBXL19Q6PCT2 694 aa6.84□□□□□ -1.31
PDLIM5-211ENST00000508531 ATG14Q6ZNE5 492 aa6.84□□□□□ -1.31
PDLIM5-211ENST00000508531 LILRA2Q8N149 483 aa6.84□□□□□ -1.31
PDLIM5-211ENST00000508531 KIF21AQ7Z4S6 1674 aa6.84□□□□□ -1.32
PDLIM5-211ENST00000508531 TCAF2A6NFQ2 919 aa6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 ZSCAN22P10073 491 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 CCDC27Q2M243 656 aa6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 CWF19L2Q2TBE0 894 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 ARSHQ5FYA8 562 aa6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 ERMP1Q7Z2K6 904 aa6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 VWCEQ96DN2 955 aa6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 SLC26A8Q96RN1 970 aa6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 BRMS1Q9HCU9 246 aa6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 CD320Q9NPF0 282 aa6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 EBF1Q9UH73 591 aa6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 PDS5BQ9NTI5 1447 aa6.83□□□□□ -1.32
PDLIM5-211ENST00000508531 SLC22A31A6NKX4 558 aa6.82□□□□□ -1.32
PDLIM5-211ENST00000508531 RGS13O14921 159 aa6.82□□□□□ -1.32
PDLIM5-211ENST00000508531 MED14OSP0DP75 135 aa6.82□□□□□ -1.32
PDLIM5-211ENST00000508531 ERCC3P19447 782 aa6.82□□□□□ -1.32
PDLIM5-211ENST00000508531 KCNA10Q16322 511 aa6.82□□□□□ -1.32
PDLIM5-211ENST00000508531 KCNN1Q92952 543 aa6.82□□□□□ -1.32
PDLIM5-211ENST00000508531 GZF1Q9H116 711 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-211ENST00000508531 ASCC2Q9H1I8 757 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-211ENST00000508531 SLC6A17Q9H1V8 727 aa6.82□□□□□ -1.32
PDLIM5-211ENST00000508531 GPR160Q9UJ42 338 aa6.82□□□□□ -1.32
PDLIM5-211ENST00000508531 PCDHB14Q9Y5E9 798 aa6.82□□□□□ -1.32
PDLIM5-211ENST00000508531 UBOX5O94941 541 aa6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 RAG1P15918 1043 aa6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 GLDCP23378 1020 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms