RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 USP6NLQ92738 828 aa15.38■□□□□ 0.05
NR1I3-225ENST00000508387 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.38■□□□□ 0.05
NR1I3-225ENST00000508387 RABGAP1Q9Y3P9 1069 aa15.38■□□□□ 0.05
NR1I3-225ENST00000508387 ALPK3Q96L96 1907 aa15.38■□□□□ 0.05
NR1I3-225ENST00000508387 FOXP2O15409 715 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 PRDM1O75626 825 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 GLRX3O76003 335 aaKnown RBP15.37■□□□□ 0.05
NR1I3-225ENST00000508387 SGPL1O95470 568 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 MAPK4P31152 587 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 WDR78Q5VTH9 848 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 PLEKHH3Q7Z736 793 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 GTF3C2Q8WUA4 911 aaPredicted RBP15.37■□□□□ 0.05
NR1I3-225ENST00000508387 ATG4CQ96DT6 458 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 NUDT12Q9BQG2 462 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 VCPKMTQ9H867 229 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 FLRT1Q9NZU1 646 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 TMX2Q9Y320 296 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 FRMPD3Q5JV73 1810 aa15.37■□□□□ 0.05
NR1I3-225ENST00000508387 ERC2O15083 957 aa15.36■□□□□ 0.05
NR1I3-225ENST00000508387 FARP2O94887 1054 aaPredicted RBP15.36■□□□□ 0.05
NR1I3-225ENST00000508387 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
NR1I3-225ENST00000508387 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
NR1I3-225ENST00000508387 TDO2P48775 406 aa15.36■□□□□ 0.05
NR1I3-225ENST00000508387 HDAC1Q13547 482 aaPredicted RBP15.36■□□□□ 0.05
NR1I3-225ENST00000508387 SBK1Q52WX2 424 aa15.36■□□□□ 0.05
NR1I3-225ENST00000508387 ZMYM1Q5SVZ6 1142 aa15.36■□□□□ 0.05
NR1I3-225ENST00000508387 LBX2Q6XYB7 198 aa15.36■□□□□ 0.05
NR1I3-225ENST00000508387 NKX2-3Q8TAU0 364 aa15.36■□□□□ 0.05
NR1I3-225ENST00000508387 SOCS4Q8WXH5 440 aa15.36■□□□□ 0.05
NR1I3-225ENST00000508387 ARHGEF10LQ9HCE6 1279 aa15.36■□□□□ 0.05
NR1I3-225ENST00000508387 FBXO28Q9NVF7 368 aa15.36■□□□□ 0.05
NR1I3-225ENST00000508387 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
NR1I3-225ENST00000508387 APPP05067 770 aa15.35■□□□□ 0.05
NR1I3-225ENST00000508387 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
NR1I3-225ENST00000508387 CCAR1Q8IX12 1150 aaKnown RBP15.35■□□□□ 0.05
NR1I3-225ENST00000508387 IFNL3Q8IZI9 196 aa15.35■□□□□ 0.05
NR1I3-225ENST00000508387 CCDC17Q96LX7 622 aa15.35■□□□□ 0.05
NR1I3-225ENST00000508387 NUP88Q99567 741 aaPredicted RBP15.35■□□□□ 0.05
NR1I3-225ENST00000508387 APBA2Q99767 749 aa15.35■□□□□ 0.05
NR1I3-225ENST00000508387 MOV10L1Q9BXT6 1211 aaKnown RBP15.35■□□□□ 0.05
NR1I3-225ENST00000508387 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
NR1I3-225ENST00000508387 CRISPLD2Q9H0B8 497 aa15.35■□□□□ 0.05
NR1I3-225ENST00000508387 CWC22Q9HCG8 908 aaKnown RBP15.35■□□□□ 0.05
NR1I3-225ENST00000508387 PCDH10Q9P2E7 1040 aa15.35■□□□□ 0.05
NR1I3-225ENST00000508387 ZNF236Q9UL36 1845 aa15.35■□□□□ 0.05
NR1I3-225ENST00000508387 H0YGN5 161 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 RAD21O60216 631 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 FLOT1O75955 427 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 SLC34A2O95436 690 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 IGHDP01880 384 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
NR1I3-225ENST00000508387 ZKSCAN1P17029 563 aaPredicted RBP15.34■□□□□ 0.05
NR1I3-225ENST00000508387 CCND3P30281 292 aaPredicted RBP15.34■□□□□ 0.05
NR1I3-225ENST00000508387 RGS2P41220 211 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 PDE1AP54750 535 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 CACNB2Q08289 660 aaPredicted RBP15.34■□□□□ 0.05
NR1I3-225ENST00000508387 MAP3K21Q5TCX8 1036 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 VPS53Q5VIR6 699 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 GIMAP6Q6P9H5 292 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 NPLOC4Q8TAT6 608 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 GCC1Q96CN9 775 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 TACC3Q9Y6A5 838 aa15.34■□□□□ 0.05
NR1I3-225ENST00000508387 PATL2C9JE40 543 aaKnown RBP15.33■□□□□ 0.04
NR1I3-225ENST00000508387 WDR46O15213 610 aaKnown RBP15.33■□□□□ 0.04
NR1I3-225ENST00000508387 PTPREP23469 700 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 DSG3P32926 999 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 MNX1P50219 401 aaPredicted RBP15.33■□□□□ 0.04
NR1I3-225ENST00000508387 MAP2K5Q13163 448 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 GRB14Q14449 540 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 COG2Q14746 738 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 FAM83BQ5T0W9 1011 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 LPAR1Q92633 364 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 SPATC1LQ9H0A9 340 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 MKNK2Q9HBH9 465 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 HMX1Q9NP08 348 aaPredicted RBP15.33■□□□□ 0.04
NR1I3-225ENST00000508387 INCENPQ9NQS7 918 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 STAP2Q9UGK3 403 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 RPTORQ8N122 1335 aa15.33■□□□□ 0.04
NR1I3-225ENST00000508387 IGKV6D-41A0A0C4DH26 115 aa15.32■□□□□ 0.04
NR1I3-225ENST00000508387 A0A0D9SFI3 127 aa15.32■□□□□ 0.04
NR1I3-225ENST00000508387 XRCC5P13010 732 aaKnown RBP15.32■□□□□ 0.04
NR1I3-225ENST00000508387 GNAT2P19087 354 aa15.32■□□□□ 0.04
NR1I3-225ENST00000508387 ERCC3P19447 782 aa15.32■□□□□ 0.04
NR1I3-225ENST00000508387 CCNA1P78396 465 aa15.32■□□□□ 0.04
NR1I3-225ENST00000508387 PLS1Q14651 629 aa15.32■□□□□ 0.04
NR1I3-225ENST00000508387 TMEM132BQ14DG7 1078 aa15.32■□□□□ 0.04
NR1I3-225ENST00000508387 DPF3Q92784 378 aa15.32■□□□□ 0.04
NR1I3-225ENST00000508387 PAWRQ96IZ0 340 aaKnown RBP15.32■□□□□ 0.04
NR1I3-225ENST00000508387 FAM227BQ96M60 508 aa15.32■□□□□ 0.04
NR1I3-225ENST00000508387 SH2D4AQ9H788 454 aa15.32■□□□□ 0.04
NR1I3-225ENST00000508387 KANSL2Q9H9L4 492 aa15.32■□□□□ 0.04
NR1I3-225ENST00000508387 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
NR1I3-225ENST00000508387 CTDSPL2Q05D32 466 aa15.31■□□□□ 0.04
NR1I3-225ENST00000508387 PPARAQ07869 468 aa15.31■□□□□ 0.04
NR1I3-225ENST00000508387 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
NR1I3-225ENST00000508387 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
NR1I3-225ENST00000508387 LRRC47Q8N1G4 583 aaKnown RBP15.31■□□□□ 0.04
NR1I3-225ENST00000508387 NAPBQ9H115 298 aa15.31■□□□□ 0.04
NR1I3-225ENST00000508387 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms