RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 CYP2C8P10632 490 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 CD46P15529 392 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 ATP5JP18859 108 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 HOXD10P28358 340 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 DYNLL1P63167 89 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 SPP2Q13103 211 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 SH3D19Q5HYK7 790 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 NBPF11Q86T75 865 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 RDH13Q8NBN7 331 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 ZNF333Q96JL9 665 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 TRIM47Q96LD4 638 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 RIOK1Q9BRS2 568 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 ARHGAP39Q9C0H5 1083 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 EHD4Q9H223 541 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 DCTPP1Q9H773 170 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 DNAJC18Q9H819 358 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 AGTPBP1Q9UPW5 1226 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 NDUFB9Q9Y6M9 179 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 SIPA1L1O43166 1804 aa9.65□□□□□ -0.86
UBE2D3-222ENST00000508238 MKI67P46013 3256 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 ATAD5Q96QE3 1844 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 TCRBV5S4A2TA0A5A2 114 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 GOLGA8CPA6NN73 597 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 APBB1O00213 710 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 HLA-DOAP06340 250 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 PDE6AP16499 860 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 CTGFP29279 349 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 PSMC4P43686 418 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 BACE1P56817 501 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 SLC9C2Q5TAH2 1124 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 TATDN1Q6P1N9 297 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 GADL1Q6ZQY3 521 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 TTC6Q86TZ1 520 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 MIGA1Q8NAN2 632 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 LRRCC1Q9C099 1032 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 AS3MTQ9HBK9 375 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 SRRDQ9UH36 339 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 PTCH2Q9Y6C5 1203 aa9.64□□□□□ -0.87
UBE2D3-222ENST00000508238 BRCA2P51587 3418 aa9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 RBBP6Q7Z6E9 1792 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 MAGEB6P1A0A0J9YX57 407 aa9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 C19orf81C9J6K1 198 aa9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 GOLIM4O00461 696 aa9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 HOXA7P31268 230 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 GCLCP48506 637 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 SLC4A3P48751 1232 aa9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 FCGRTP55899 365 aa9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 JAG1P78504 1218 aa9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 PABPC4Q13310 644 aaKnown RBP eCLIP9.63□□□□□ -0.874e-7■■■■□ 24.1
UBE2D3-222ENST00000508238 SLC9C1Q4G0N8 1177 aa9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 CCDC84Q86UT8 332 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 CRACR2BQ8N4Y2 399 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 HAUS7Q99871 368 aa9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 SERPINB13Q9UIV8 391 aa9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 MGAMO43451 1857 aa9.63□□□□□ -0.87
UBE2D3-222ENST00000508238 RNF40O75150 1001 aa9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 FMNL1O95466 1100 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 USP5P45974 858 aa9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 HMGCS2P54868 508 aa9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 FAM110CQ1W6H9 321 aa9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 TREML2Q5T2D2 321 aa9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 SMCR8Q8TEV9 937 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 TRIM34Q9BYJ4 488 aa9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 CRNKL1Q9BZJ0 848 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 PAG1Q9NWQ8 432 aa9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 SAP30BPQ9UHR5 308 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 ZBTB21Q9ULJ3 1066 aa9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 LOC285556D6RIA3 1793 aa9.62□□□□□ -0.87
UBE2D3-222ENST00000508238 TRIOBPQ9H2D6 2365 aa9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 ZSWIM8A7E2V4 1837 aa9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 ZNF532Q9HCE3 1301 aa9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 USP17L10C9JJH3 530 aa9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 ADD2P35612 726 aa9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 PLCD1P51178 756 aa9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 GABPAQ06546 454 aa9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 UBE3CQ15386 1083 aa9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 LRCH3Q96II8 777 aa9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 DNAJC2Q99543 621 aaKnown RBP9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.61□□□□□ -0.879e-7■■□□□ 13.5
UBE2D3-222ENST00000508238 ASCC2Q9H1I8 757 aaPredicted RBP9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 BOLA2Q9H3K6 86 aa9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 ECHDC1Q9NTX5 307 aa9.61□□□□□ -0.87
UBE2D3-222ENST00000508238 GDF11O95390 407 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 GH2P01242 217 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 GRK4P32298 578 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 SHMT1P34896 483 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 IRF5Q13568 498 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 MTMR2Q13614 643 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 CERKLQ49MI3 558 aaPredicted RBP9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 ANKRD13CQ8N6S4 541 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 ANKK1Q8NFD2 765 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 RAET1EQ8TD07 263 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 EDC3Q96F86 508 aaKnown RBP9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 C12orf42Q96LP6 360 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 DCP1AQ9NPI6 582 aaPredicted RBP9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 ATP8A2Q9NTI2 1148 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 TMOD4Q9NZQ9 345 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 MORF4L1Q9UBU8 362 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms