RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 PCP11498 1178 aaKnown RBP12.45□□□□□ -0.42
LIN54-207ENST00000508171 NR1I3Q14994 352 aa12.45□□□□□ -0.42
LIN54-207ENST00000508171 RCSD1Q6JBY9 416 aa12.45□□□□□ -0.42
LIN54-207ENST00000508171 BAG1Q99933 345 aaPredicted RBP12.45□□□□□ -0.42
LIN54-207ENST00000508171 TSPY2A6NKD2 308 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 TM4SF1P30408 202 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 NLRP5P59047 1200 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 IL17AQ16552 155 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 FAM182BQ5T319 152 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 FBXO38Q6PIJ6 1188 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 FERMT2Q96AC1 680 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 BRMS1Q9HCU9 246 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 ATP8A2Q9NTI2 1148 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 MCM9Q9NXL9 1143 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 NARFQ9UHQ1 456 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 PPP2R2CQ9Y2T4 447 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 CCDC88AQ3V6T2 1871 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 SCG2P13521 617 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 ERCC5P28715 1186 aaPredicted RBP12.44□□□□□ -0.42
LIN54-207ENST00000508171 MCM7P33993 719 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 DPYDQ12882 1025 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 FEZ1Q99689 392 aa12.44□□□□□ -0.42
LIN54-207ENST00000508171 GNPATO15228 680 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 ARHGAP6O43182 974 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 CDC25AP30304 524 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 ATP2C1P98194 919 aaPredicted RBP12.43□□□□□ -0.42
LIN54-207ENST00000508171 TOGARAM2Q6ZUX3 1019 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 APTXQ7Z2E3 356 aaKnown RBP12.43□□□□□ -0.42
LIN54-207ENST00000508171 DYNLL2Q96FJ2 89 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 NYXQ9GZU5 481 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 BLZF1Q9H2G9 400 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 IL17RBQ9NRM6 502 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.43□□□□□ -0.42
LIN54-207ENST00000508171 PPP1R3GB7ZBB8 358 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 ZPR1O75312 459 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 CUL4BQ13620 913 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 STAG2Q8N3U4 1231 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 OGFRQ9NZT2 677 aa12.43□□□□□ -0.42
LIN54-207ENST00000508171 DDX41Q9UJV9 622 aaKnown RBP12.43□□□□□ -0.42
LIN54-207ENST00000508171 MORC2Q9Y6X9 1032 aaPredicted RBP12.43□□□□□ -0.42
LIN54-207ENST00000508171 CNTNAP4Q9C0A0 1308 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 A0A1B0GTH6 734 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 CCP110O43303 1012 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 RPS6KA4O75676 772 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 PIP4K2BP78356 416 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 TFAP4Q01664 338 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 PFKFB3Q16875 520 aaPredicted RBP12.42□□□□□ -0.42
LIN54-207ENST00000508171 SPATA1Q5VX52 437 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 ZNF397Q8NF99 534 aaPredicted RBP12.42□□□□□ -0.42
LIN54-207ENST00000508171 GPKOWQ92917 476 aaPredicted RBP eCLIP12.42□□□□□ -0.42
LIN54-207ENST00000508171 MTRQ99707 1265 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 NOL10Q9BSC4 688 aaKnown RBP12.42□□□□□ -0.42
LIN54-207ENST00000508171 ANKRD2Q9GZV1 360 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 LAMB1P07942 1786 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 STX10O60499 249 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 MTF1Q14872 753 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 GRIK5Q16478 980 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 SBK1Q52WX2 424 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 DZIP1Q86YF9 867 aaKnown RBP12.42□□□□□ -0.42
LIN54-207ENST00000508171 CPLX3Q8WVH0 158 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 GSDMAQ96QA5 445 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 DESI2Q9BSY9 194 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 ARPP21Q9UBL0 812 aaPredicted RBP12.42□□□□□ -0.42
LIN54-207ENST00000508171 XDHP47989 1333 aa12.42□□□□□ -0.42
LIN54-207ENST00000508171 KIAA1551Q9HCM1 1747 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 URI1O94763 535 aaPredicted RBP12.41□□□□□ -0.42
LIN54-207ENST00000508171 BMP15O95972 392 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 E2F4Q16254 413 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 RASGRP4Q8TDF6 673 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 WDR24Q96S15 920 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 MTMR7Q9Y216 660 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 PHLPP2Q6ZVD8 1323 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 SYNRGQ9UMZ2 1314 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 ZSCAN12O43309 604 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 IGSF3O75054 1194 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 TUBB4AP04350 444 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 DIXDC1Q155Q3 683 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 FCHSD1Q86WN1 690 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 ARHGEF1Q92888 912 aaKnown RBP12.41□□□□□ -0.42
LIN54-207ENST00000508171 CCDC34Q96HJ3 373 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 ANKIB1Q9P2G1 1089 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 MKRN1Q9UHC7 482 aaKnown RBP12.41□□□□□ -0.42
LIN54-207ENST00000508171 PDS5AQ29RF7 1337 aaKnown RBP12.41□□□□□ -0.42
LIN54-207ENST00000508171 IRS2Q9Y4H2 1338 aa12.41□□□□□ -0.42
LIN54-207ENST00000508171 USP17L3A6NCW0 530 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 USP17L4A6NCW7 530 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 RBL2Q08999 1139 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 C12orf60Q5U649 245 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 TYW1BQ6NUM6 668 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 USP17L1Q7RTZ2 530 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 SH3RF3Q8TEJ3 882 aaPredicted RBP12.4□□□□□ -0.42
LIN54-207ENST00000508171 GPR101Q96P66 508 aaPredicted RBP12.4□□□□□ -0.42
LIN54-207ENST00000508171 KAT14Q9H8E8 782 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 ZNF446Q9NWS9 450 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.42
LIN54-207ENST00000508171 PRDM4Q9UKN5 801 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 PARP3Q9Y6F1 533 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 FAM205AQ6ZU69 1335 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 MYH8P13535 1937 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms