RNA–Protein interactions for RNA: ENST00000507968.1

SSBP2-209, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-209ENST00000507968 UTRNP46939 3433 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 PALM3A6NDB9 673 aaPredicted RBP12.53□□□□□ -0.4
SSBP2-209ENST00000507968 F5H6K3 240 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 CTDNEP1O95476 244 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
SSBP2-209ENST00000507968 SNHG28P0DPA3 235 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 DDIT3P35638 169 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 AKAP17AQ02040 695 aaKnown RBP12.53□□□□□ -0.4
SSBP2-209ENST00000507968 KLRC3Q07444 240 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 NTRK3Q16288 839 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 MAP3K11Q16584 847 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 ASPRV1Q53RT3 343 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 GPATCH4Q5T3I0 446 aaKnown RBP12.53□□□□□ -0.4
SSBP2-209ENST00000507968 ARMC9Q7Z3E5 817 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 TRIM22Q8IYM9 498 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.53□□□□□ -0.4
SSBP2-209ENST00000507968 DCAF4Q8WV16 495 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 WASF1Q92558 559 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 WDR18Q9BV38 432 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 GLIS2Q9BZE0 524 aaPredicted RBP12.53□□□□□ -0.4
SSBP2-209ENST00000507968 AS3MTQ9HBK9 375 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 GOPCQ9HD26 462 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
SSBP2-209ENST00000507968 ADAMTSL1Q8N6G6 1762 aa12.53□□□□□ -0.4
SSBP2-209ENST00000507968 PTPDC1A2A3K4 754 aa12.52□□□□□ -0.41
SSBP2-209ENST00000507968 PRPF3O43395 683 aaKnown RBP12.52□□□□□ -0.41
SSBP2-209ENST00000507968 FMNL1O95466 1100 aaPredicted RBP12.52□□□□□ -0.41
SSBP2-209ENST00000507968 PDHBP11177 359 aa12.52□□□□□ -0.41
SSBP2-209ENST00000507968 RXRAP19793 462 aa12.52□□□□□ -0.41
SSBP2-209ENST00000507968 INPP5BP32019 993 aa12.52□□□□□ -0.41
SSBP2-209ENST00000507968 FKBP1BP68106 108 aa12.52□□□□□ -0.41
SSBP2-209ENST00000507968 LARP1BQ659C4 914 aaKnown RBP12.52□□□□□ -0.41
SSBP2-209ENST00000507968 MAP1SQ66K74 1059 aaPredicted RBP12.52□□□□□ -0.41
SSBP2-209ENST00000507968 SLFN13Q68D06 897 aa12.52□□□□□ -0.41
SSBP2-209ENST00000507968 TMTC3Q6ZXV5 915 aa12.52□□□□□ -0.41
SSBP2-209ENST00000507968 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
SSBP2-209ENST00000507968 GMCL1Q96IK5 515 aa12.52□□□□□ -0.41
SSBP2-209ENST00000507968 NMRK2Q9NPI5 230 aa12.52□□□□□ -0.41
SSBP2-209ENST00000507968 ORC3Q9UBD5 711 aaPredicted RBP12.52□□□□□ -0.41
SSBP2-209ENST00000507968 MAD2L2Q9UI95 211 aa12.52□□□□□ -0.41
SSBP2-209ENST00000507968 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.41
SSBP2-209ENST00000507968 DDX60LQ5H9U9 1706 aaKnown RBP12.51□□□□□ -0.41
SSBP2-209ENST00000507968 WDR90Q96KV7 1748 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 LAMA4Q16363 1823 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 NAV1Q8NEY1 1877 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 KLRF2D3W0D1 207 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 PTPRAP18433 802 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 USP14P54578 494 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 ZNF543Q08ER8 600 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 SHROOM1Q2M3G4 852 aaPredicted RBP12.51□□□□□ -0.41
SSBP2-209ENST00000507968 CHADLQ6NUI6 762 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 LRRC47Q8N1G4 583 aaKnown RBP12.51□□□□□ -0.41
SSBP2-209ENST00000507968 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
SSBP2-209ENST00000507968 RNF26Q9BY78 433 aaPredicted RBP12.51□□□□□ -0.41
SSBP2-209ENST00000507968 KIAA1683Q9H0B3 1180 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 CSADQ9Y600 493 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 FOCADQ5VW36 1801 aa12.51□□□□□ -0.41
SSBP2-209ENST00000507968 MYH1P12882 1939 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 A0A1W2PRG0 241 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 C19orf81C9J6K1 198 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 USP17L10C9JJH3 530 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 JAK2O60674 1132 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 DEXIO95424 95 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 POTEJP0CG39 1038 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 SLC1A4P43007 532 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 FUT2Q10981 343 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 PRKG1Q13976 671 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
SSBP2-209ENST00000507968 USP17L2Q6R6M4 530 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.5□□□□□ -0.41
SSBP2-209ENST00000507968 NBPF11Q86T75 865 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 SRBD1Q8N5C6 995 aaKnown RBP12.5□□□□□ -0.41
SSBP2-209ENST00000507968 ZNF280CQ8ND82 737 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 RBM46Q8TBY0 533 aaKnown RBP12.5□□□□□ -0.41
SSBP2-209ENST00000507968 ACER1Q8TDN7 264 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 ZNF526Q8TF50 670 aaPredicted RBP12.5□□□□□ -0.41
SSBP2-209ENST00000507968 LPAR1Q92633 364 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 DDX11Q96FC9 970 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 SLC26A6Q9BXS9 759 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 VCPKMTQ9H867 229 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
SSBP2-209ENST00000507968 ZHX2Q9Y6X8 837 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 V9GY48 417 aaPredicted RBP12.5□□□□□ -0.41
SSBP2-209ENST00000507968 STK36Q9NRP7 1315 aa12.5□□□□□ -0.41
SSBP2-209ENST00000507968 SCN4AP35499 1836 aa12.49□□□□□ -0.41
SSBP2-209ENST00000507968 PLA2G6O60733 806 aa12.49□□□□□ -0.41
SSBP2-209ENST00000507968 NDUFB10O96000 172 aa12.49□□□□□ -0.41
SSBP2-209ENST00000507968 BMP3P12645 472 aa12.49□□□□□ -0.41
SSBP2-209ENST00000507968 FDPSP14324 419 aaKnown RBP12.49□□□□□ -0.41
SSBP2-209ENST00000507968 XBP1P17861 261 aa12.49□□□□□ -0.41
SSBP2-209ENST00000507968 SYT1P21579 422 aa12.49□□□□□ -0.41
SSBP2-209ENST00000507968 ECE1P42892 770 aa12.49□□□□□ -0.41
SSBP2-209ENST00000507968 LDLRAD1Q5T700 205 aa12.49□□□□□ -0.41
SSBP2-209ENST00000507968 DLK2Q6UY11 383 aa12.49□□□□□ -0.41
SSBP2-209ENST00000507968 CLEC10AQ8IUN9 316 aa12.49□□□□□ -0.41
SSBP2-209ENST00000507968 FAM177A1Q8N128 213 aaPredicted RBP12.49□□□□□ -0.41
SSBP2-209ENST00000507968 STAG2Q8N3U4 1231 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms