RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 RGL2O15211 777 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 ACTN4O43707 911 aaKnown RBP16.57■□□□□ 0.24
DDX41-208ENST00000507955 SERPINC1P01008 464 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 SLC35G1Q2M3R5 365 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 SPTY2D1Q68D10 685 aaPredicted RBP16.57■□□□□ 0.24
DDX41-208ENST00000507955 TYW1BQ6NUM6 668 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 PNMA1Q8ND90 353 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 WDR66Q8TBY9 1149 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 TNFRSF25Q93038 417 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 MED15Q96RN5 788 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 KAT14Q9H8E8 782 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 CD209Q9NNX6 404 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 LEMD3Q9Y2U8 911 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 SCG2P13521 617 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 MCM7P33993 719 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 MYL5Q02045 173 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 PTGDRQ13258 359 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 ZNF804AQ7Z570 1209 aa16.57■□□□□ 0.24
DDX41-208ENST00000507955 SMYD4Q8IYR2 804 aaPredicted RBP16.57■□□□□ 0.24
DDX41-208ENST00000507955 SBF2Q86WG5 1849 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 RIMBP2O15034 1052 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 CALM1P0DP23 149 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 CALM2P0DP24 149 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 CALM3P0DP25 149 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 DDR1Q08345 913 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 PPP2R5BQ15173 497 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 CCDC88AQ3V6T2 1871 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 BTDP43251 543 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 UBASH3AP57075 661 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 CFAP100Q494V2 611 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 CEP135Q66GS9 1140 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 NYAP1Q6ZVC0 841 aa16.56■□□□□ 0.24
DDX41-208ENST00000507955 SPATA31A6Q5VVP1 1343 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 FAM205AQ6ZU69 1335 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 KIAA1551Q9HCM1 1747 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 F8W031 263 aaPredicted RBP16.55■□□□□ 0.24
DDX41-208ENST00000507955 IKBKBO14920 756 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 TSPY3P0CV98 308 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 TSPY8P0CW00 308 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 PCP11498 1178 aaKnown RBP16.55■□□□□ 0.24
DDX41-208ENST00000507955 IL17AQ16552 155 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 TTC38Q5R3I4 469 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 RTFDC1Q9BY42 306 aaPredicted RBP16.55■□□□□ 0.24
DDX41-208ENST00000507955 C6orf229H3BNL8 230 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 SMARCE1Q969G3 411 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 CEP131Q9UPN4 1083 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 LY75O60449 1722 aa16.55■□□□□ 0.24
DDX41-208ENST00000507955 CYTH3O43739 400 aa16.54■□□□□ 0.24
DDX41-208ENST00000507955 TPM4P67936 248 aa16.54■□□□□ 0.24
DDX41-208ENST00000507955 MFSD14BQ5SR56 506 aa16.54■□□□□ 0.24
DDX41-208ENST00000507955 KLHL10Q6JEL2 608 aa16.54■□□□□ 0.24
DDX41-208ENST00000507955 CCDC112Q8NEF3 446 aa16.54■□□□□ 0.24
DDX41-208ENST00000507955 MXD3Q9BW11 206 aa16.54■□□□□ 0.24
DDX41-208ENST00000507955 STX17P56962 302 aa16.54■□□□□ 0.24
DDX41-208ENST00000507955 PFKFB3Q16875 520 aaPredicted RBP16.54■□□□□ 0.24
DDX41-208ENST00000507955 OSBPL5Q9H0X9 879 aaPredicted RBP16.54■□□□□ 0.24
DDX41-208ENST00000507955 QTRT2Q9H974 415 aaKnown RBP16.54■□□□□ 0.24
DDX41-208ENST00000507955 SAMSN1Q9NSI8 373 aaKnown RBP16.54■□□□□ 0.24
DDX41-208ENST00000507955 INTS13Q9NVM9 706 aa16.54■□□□□ 0.24
DDX41-208ENST00000507955 MAD2L2Q9UI95 211 aa16.54■□□□□ 0.24
DDX41-208ENST00000507955 GGA1Q9UJY5 639 aa16.54■□□□□ 0.24
DDX41-208ENST00000507955 PAXBP1Q9Y5B6 917 aa16.54■□□□□ 0.24
DDX41-208ENST00000507955 BAG3O95817 575 aa16.53■□□□□ 0.24
DDX41-208ENST00000507955 SLURP2P0DP57 97 aa16.53■□□□□ 0.24
DDX41-208ENST00000507955 SARSP49591 514 aaKnown RBP16.53■□□□□ 0.24
DDX41-208ENST00000507955 ZNF444Q8N0Y2 327 aaPredicted RBP16.53■□□□□ 0.24
DDX41-208ENST00000507955 ZNF579Q8NAF0 562 aaKnown RBP16.53■□□□□ 0.24
DDX41-208ENST00000507955 BLZF1Q9H2G9 400 aa16.53■□□□□ 0.24
DDX41-208ENST00000507955 RASA1P20936 1047 aa16.53■□□□□ 0.24
DDX41-208ENST00000507955 CRY2Q49AN0 593 aa16.53■□□□□ 0.24
DDX41-208ENST00000507955 PROM2Q8N271 834 aa16.53■□□□□ 0.24
DDX41-208ENST00000507955 BRMS1Q9HCU9 246 aa16.53■□□□□ 0.24
DDX41-208ENST00000507955 NFE2L3Q9Y4A8 694 aa16.53■□□□□ 0.24
DDX41-208ENST00000507955 NEMFO60524 1076 aa16.52■□□□□ 0.24
DDX41-208ENST00000507955 CD44P16070 742 aaKnown RBP16.52■□□□□ 0.24
DDX41-208ENST00000507955 ST5P78524 1137 aa16.52■□□□□ 0.24
DDX41-208ENST00000507955 MORC3Q14149 939 aa16.52■□□□□ 0.24
DDX41-208ENST00000507955 CCAR2Q8N163 923 aaKnown RBP16.52■□□□□ 0.24
DDX41-208ENST00000507955 TBC1D16Q8TBP0 767 aa16.52■□□□□ 0.24
DDX41-208ENST00000507955 TMEM47Q9BQJ4 181 aa16.52■□□□□ 0.24
DDX41-208ENST00000507955 E4F1Q66K89 784 aaPredicted RBP16.52■□□□□ 0.23
DDX41-208ENST00000507955 TEX11Q8IYF3 940 aa16.52■□□□□ 0.23
DDX41-208ENST00000507955 PAGE5Q96GU1 130 aa16.52■□□□□ 0.23
DDX41-208ENST00000507955 LAMB1P07942 1786 aa16.52■□□□□ 0.23
DDX41-208ENST00000507955 SFPQP23246 707 aaKnown RBP eCLIP16.51■□□□□ 0.23
DDX41-208ENST00000507955 GTF2IP78347 998 aa16.51■□□□□ 0.23
DDX41-208ENST00000507955 DMTNQ08495 405 aa16.51■□□□□ 0.23
DDX41-208ENST00000507955 PICALMQ13492 652 aa16.51■□□□□ 0.23
DDX41-208ENST00000507955 HEATR3Q7Z4Q2 680 aa16.51■□□□□ 0.23
DDX41-208ENST00000507955 CLEC10AQ8IUN9 316 aa16.51■□□□□ 0.23
DDX41-208ENST00000507955 NOL10Q9BSC4 688 aaKnown RBP16.51■□□□□ 0.23
DDX41-208ENST00000507955 VAT1LQ9HCJ6 419 aa16.51■□□□□ 0.23
DDX41-208ENST00000507955 DLEC1Q9Y238 1755 aa16.51■□□□□ 0.23
DDX41-208ENST00000507955 ONECUT3O60422 494 aaPredicted RBP16.51■□□□□ 0.23
DDX41-208ENST00000507955 SYCP1Q15431 976 aa16.51■□□□□ 0.23
DDX41-208ENST00000507955 PTPN14Q15678 1187 aa16.51■□□□□ 0.23
DDX41-208ENST00000507955 USP17L2Q6R6M4 530 aa16.51■□□□□ 0.23
DDX41-208ENST00000507955 HOMER1Q86YM7 354 aa16.51■□□□□ 0.23
DDX41-208ENST00000507955 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms