RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CCDC84Q86UT8 332 aaPredicted RBP20.35■□□□□ 0.85
RNF4-209ENST00000507784 ZKSCAN4Q969J2 545 aaPredicted RBP20.35■□□□□ 0.85
RNF4-209ENST00000507784 LLPHQ9BRT6 129 aaKnown RBP20.35■□□□□ 0.85
RNF4-209ENST00000507784 ZNF408Q9H9D4 720 aa20.35■□□□□ 0.85
RNF4-209ENST00000507784 GINM1Q9NU53 330 aa20.35■□□□□ 0.85
RNF4-209ENST00000507784 ISY1Q9ULR0 285 aaKnown RBP20.35■□□□□ 0.85
RNF4-209ENST00000507784 DOCK1Q14185 1865 aa20.35■□□□□ 0.85
RNF4-209ENST00000507784 JAK2O60674 1132 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 CDKL5O76039 1030 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 KIF5BP33176 963 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 IREB2P48200 963 aaKnown RBP20.34■□□□□ 0.85
RNF4-209ENST00000507784 GRM4Q14833 912 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 PPP2R5BQ15173 497 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 SIAH1Q8IUQ4 282 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 SCYL3Q8IZE3 742 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 CCDC82Q8N4S0 544 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 FAM184AQ8NB25 1140 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 NSUN7Q8NE18 718 aaKnown RBP20.34■□□□□ 0.85
RNF4-209ENST00000507784 MKL1Q969V6 931 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 KLRG1Q96E93 195 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 PICK1Q9NRD5 415 aa20.34■□□□□ 0.85
RNF4-209ENST00000507784 FAM217BQ9NTX9 383 aaPredicted RBP20.34■□□□□ 0.85
RNF4-209ENST00000507784 PTPDC1A2A3K4 754 aa20.33■□□□□ 0.85
RNF4-209ENST00000507784 USP17L5A8MUK1 530 aa20.33■□□□□ 0.85
RNF4-209ENST00000507784 TRAF5O00463 557 aa20.33■□□□□ 0.85
RNF4-209ENST00000507784 CTDNEP1O95476 244 aa20.33■□□□□ 0.85
RNF4-209ENST00000507784 PARP1P09874 1014 aaKnown RBP20.33■□□□□ 0.85
RNF4-209ENST00000507784 MAP3K9P80192 1104 aa20.33■□□□□ 0.85
RNF4-209ENST00000507784 CMTR1Q8N1G2 835 aaKnown RBP20.33■□□□□ 0.85
RNF4-209ENST00000507784 NID2Q14112 1375 aa20.33■□□□□ 0.84
RNF4-209ENST00000507784 GOLGA8HP0CJ92 632 aa20.32■□□□□ 0.84
RNF4-209ENST00000507784 ECE1P42892 770 aa20.32■□□□□ 0.84
RNF4-209ENST00000507784 SSRP1Q08945 709 aaKnown RBP20.32■□□□□ 0.84
RNF4-209ENST00000507784 SLFN13Q68D06 897 aa20.32■□□□□ 0.84
RNF4-209ENST00000507784 USP17L2Q6R6M4 530 aa20.32■□□□□ 0.84
RNF4-209ENST00000507784 ACER1Q8TDN7 264 aa20.32■□□□□ 0.84
RNF4-209ENST00000507784 MAP3K14Q99558 947 aa20.32■□□□□ 0.84
RNF4-209ENST00000507784 GPBP1L1Q9HC44 474 aaPredicted RBP20.32■□□□□ 0.84
RNF4-209ENST00000507784 FRMPD2Q68DX3 1309 aaPredicted RBP20.31■□□□□ 0.84
RNF4-209ENST00000507784 A0A1W2PRG0 241 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 PLEKHA8P1O95397 391 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 GNAQP50148 359 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 HMGN5P82970 282 aaKnown RBP20.31■□□□□ 0.84
RNF4-209ENST00000507784 FMR1Q06787 632 aaKnown RBP eCLIP20.31■□□□□ 0.84
RNF4-209ENST00000507784 ZYXQ15942 572 aaKnown RBP20.31■□□□□ 0.84
RNF4-209ENST00000507784 CCDC96Q2M329 555 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 MOB2Q70IA6 237 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 RASGRP2Q7LDG7 609 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 ARMC9Q7Z3E5 817 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 STAG2Q8N3U4 1231 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.31■□□□□ 0.84
RNF4-209ENST00000507784 SMARCC2Q8TAQ2 1214 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 PHKBQ93100 1093 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 FEZ1Q99689 392 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 SLC26A6Q9BXS9 759 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 SH2D4AQ9H788 454 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 AS3MTQ9HBK9 375 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 GPCPD1Q9NPB8 672 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 ORC3Q9UBD5 711 aaPredicted RBP20.31■□□□□ 0.84
RNF4-209ENST00000507784 CSADQ9Y600 493 aa20.31■□□□□ 0.84
RNF4-209ENST00000507784 F5H6K3 240 aa20.3■□□□□ 0.84
RNF4-209ENST00000507784 PDHBP11177 359 aa20.3■□□□□ 0.84
RNF4-209ENST00000507784 FOSBP53539 338 aa20.3■□□□□ 0.84
RNF4-209ENST00000507784 AKAP17AQ02040 695 aaKnown RBP20.3■□□□□ 0.84
RNF4-209ENST00000507784 KLRC3Q07444 240 aa20.3■□□□□ 0.84
RNF4-209ENST00000507784 CHADLQ6NUI6 762 aa20.3■□□□□ 0.84
RNF4-209ENST00000507784 TMTC3Q6ZXV5 915 aa20.3■□□□□ 0.84
RNF4-209ENST00000507784 GOPCQ9HD26 462 aa20.3■□□□□ 0.84
RNF4-209ENST00000507784 MAD2L2Q9UI95 211 aa20.3■□□□□ 0.84
RNF4-209ENST00000507784 TMX2Q9Y320 296 aa20.3■□□□□ 0.84
RNF4-209ENST00000507784 MYH6P13533 1939 aa20.29■□□□□ 0.84
RNF4-209ENST00000507784 PALM3A6NDB9 673 aaPredicted RBP20.29■□□□□ 0.84
RNF4-209ENST00000507784 IFNAR1P17181 557 aa20.29■□□□□ 0.84
RNF4-209ENST00000507784 NTRK3Q16288 839 aa20.29■□□□□ 0.84
RNF4-209ENST00000507784 NOL9Q5SY16 702 aaKnown RBP20.29■□□□□ 0.84
RNF4-209ENST00000507784 TRIM22Q8IYM9 498 aa20.29■□□□□ 0.84
RNF4-209ENST00000507784 SRBD1Q8N5C6 995 aaKnown RBP20.29■□□□□ 0.84
RNF4-209ENST00000507784 DCAF4Q8WV16 495 aa20.29■□□□□ 0.84
RNF4-209ENST00000507784 CHMP5Q9NZZ3 219 aa20.29■□□□□ 0.84
RNF4-209ENST00000507784 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
RNF4-209ENST00000507784 KLRF2D3W0D1 207 aa20.28■□□□□ 0.84
RNF4-209ENST00000507784 UBE2Q2LH0YL09 131 aa20.28■□□□□ 0.84
RNF4-209ENST00000507784 FMNL1O95466 1100 aaPredicted RBP20.28■□□□□ 0.84
RNF4-209ENST00000507784 PTPRAP18433 802 aa20.28■□□□□ 0.84
RNF4-209ENST00000507784 SLC1A4P43007 532 aa20.28■□□□□ 0.84
RNF4-209ENST00000507784 ASPRV1Q53RT3 343 aa20.28■□□□□ 0.84
RNF4-209ENST00000507784 LARP1BQ659C4 914 aaKnown RBP20.28■□□□□ 0.84
RNF4-209ENST00000507784 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.28■□□□□ 0.84
RNF4-209ENST00000507784 GMCL1P1Q8NEA9 526 aa20.28■□□□□ 0.84
RNF4-209ENST00000507784 PIBF1Q8WXW3 757 aa20.28■□□□□ 0.84
RNF4-209ENST00000507784 LZTS2Q9BRK4 669 aa20.28■□□□□ 0.84
RNF4-209ENST00000507784 ZHX2Q9Y6X8 837 aa20.28■□□□□ 0.84
RNF4-209ENST00000507784 OTOFQ9HC10 1997 aa20.27■□□□□ 0.84
RNF4-209ENST00000507784 NDUFB10O96000 172 aa20.27■□□□□ 0.84
RNF4-209ENST00000507784 ZNF543Q08ER8 600 aa20.27■□□□□ 0.84
RNF4-209ENST00000507784 VGLL4Q14135 290 aa20.27■□□□□ 0.84
RNF4-209ENST00000507784 KCTD1Q719H9 257 aa20.27■□□□□ 0.84
RNF4-209ENST00000507784 ANKRD13AQ8IZ07 590 aa20.27■□□□□ 0.84
RNF4-209ENST00000507784 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
RNF4-209ENST00000507784 UBA5Q9GZZ9 404 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms