RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 LRRC4BQ9NT99 713 aa25.12■■□□□ 1.61
SPCS3-203ENST00000507678 STX17P56962 302 aa25.12■■□□□ 1.61
SPCS3-203ENST00000507678 MEX3CQ5U5Q3 659 aaKnown RBP25.12■■□□□ 1.61
SPCS3-203ENST00000507678 SMYD4Q8IYR2 804 aaPredicted RBP25.12■■□□□ 1.61
SPCS3-203ENST00000507678 RPGRQ92834 1020 aaKnown RBP25.12■■□□□ 1.61
SPCS3-203ENST00000507678 IL17RBQ9NRM6 502 aa25.12■■□□□ 1.61
SPCS3-203ENST00000507678 STX8Q9UNK0 236 aa25.12■■□□□ 1.61
SPCS3-203ENST00000507678 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.11■■□□□ 1.61
SPCS3-203ENST00000507678 TOP1P11387 765 aaKnown RBP25.11■■□□□ 1.61
SPCS3-203ENST00000507678 GOLGB1Q14789 3259 aaKnown RBP25.11■■□□□ 1.61
SPCS3-203ENST00000507678 CBFA2T2O43439 604 aa25.11■■□□□ 1.61
SPCS3-203ENST00000507678 PNMA1Q8ND90 353 aa25.11■■□□□ 1.61
SPCS3-203ENST00000507678 SAMSN1Q9NSI8 373 aaKnown RBP25.11■■□□□ 1.61
SPCS3-203ENST00000507678 COBLO75128 1261 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 C12orf60Q5U649 245 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 NYAP1Q6ZVC0 841 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 RASGRP2Q7LDG7 609 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 WDR66Q8TBY9 1149 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 PAXBP1Q9Y5B6 917 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 TNRC6CQ9HCJ0 1690 aaKnown RBP25.1■■□□□ 1.61
SPCS3-203ENST00000507678 UFL1O94874 794 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 TSPY3P0CV98 308 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 TSPY8P0CW00 308 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 PLCD1P51178 756 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 MORC3Q14149 939 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 SBK1Q52WX2 424 aa25.1■■□□□ 1.61
SPCS3-203ENST00000507678 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.1■■□□□ 1.61
SPCS3-203ENST00000507678 V9GYY5 206 aaPredicted RBP25.1■■□□□ 1.61
SPCS3-203ENST00000507678 PDS5AQ29RF7 1337 aaKnown RBP25.1■■□□□ 1.61
SPCS3-203ENST00000507678 CDC25AP30304 524 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 GPSM2P81274 684 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 NOL10Q9BSC4 688 aaKnown RBP25.09■■□□□ 1.61
SPCS3-203ENST00000507678 INTS13Q9NVM9 706 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 IRS2Q9Y4H2 1338 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 NRDCO43847 1150 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 PRR5LQ6MZQ0 368 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 ZNF804AQ7Z570 1209 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 TNFRSF25Q93038 417 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 CPVLQ9H3G5 476 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 XDHP47989 1333 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 GOLGA8HP0CJ92 632 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 SARSP49591 514 aaKnown RBP25.09■■□□□ 1.61
SPCS3-203ENST00000507678 PPP1R13BQ96KQ4 1090 aa25.09■■□□□ 1.61
SPCS3-203ENST00000507678 KIF5BP33176 963 aa25.08■■□□□ 1.61
SPCS3-203ENST00000507678 PFKFB3Q16875 520 aaPredicted RBP25.08■■□□□ 1.61
SPCS3-203ENST00000507678 MLKLQ8NB16 471 aa25.08■■□□□ 1.61
SPCS3-203ENST00000507678 PAGE5Q96GU1 130 aa25.08■■□□□ 1.61
SPCS3-203ENST00000507678 MED15Q96RN5 788 aa25.08■■□□□ 1.61
SPCS3-203ENST00000507678 BLZF1Q9H2G9 400 aa25.08■■□□□ 1.61
SPCS3-203ENST00000507678 KANK3Q6NY19 840 aa25.08■■□□□ 1.6
SPCS3-203ENST00000507678 ZNF444Q8N0Y2 327 aaPredicted RBP25.08■■□□□ 1.6
SPCS3-203ENST00000507678 BBXQ8WY36 941 aaPredicted RBP25.08■■□□□ 1.6
SPCS3-203ENST00000507678 LEMD3Q9Y2U8 911 aa25.08■■□□□ 1.6
SPCS3-203ENST00000507678 RGL2O15211 777 aa25.07■■□□□ 1.6
SPCS3-203ENST00000507678 BAG3O95817 575 aa25.07■■□□□ 1.6
SPCS3-203ENST00000507678 VSTM4Q8IW00 320 aa25.07■■□□□ 1.6
SPCS3-203ENST00000507678 AMOTL1Q8IY63 956 aa25.07■■□□□ 1.6
SPCS3-203ENST00000507678 DACH1Q9UI36 760 aa25.07■■□□□ 1.6
SPCS3-203ENST00000507678 CTIFO43310 598 aaKnown RBP25.06■■□□□ 1.6
SPCS3-203ENST00000507678 NT5DC1Q5TFE4 455 aa25.06■■□□□ 1.6
SPCS3-203ENST00000507678 SLFN14P0C7P3 912 aa25.06■■□□□ 1.6
SPCS3-203ENST00000507678 HOMER1Q86YM7 354 aa25.06■■□□□ 1.6
SPCS3-203ENST00000507678 FERMT2Q96AC1 680 aa25.06■■□□□ 1.6
SPCS3-203ENST00000507678 MKRN1Q9UHC7 482 aaKnown RBP25.06■■□□□ 1.6
SPCS3-203ENST00000507678 FAM205AQ6ZU69 1335 aa25.06■■□□□ 1.6
SPCS3-203ENST00000507678 ZNF831Q5JPB2 1677 aa25.06■■□□□ 1.6
SPCS3-203ENST00000507678 NCBP1Q09161 790 aaKnown RBP25.05■■□□□ 1.6
SPCS3-203ENST00000507678 SYT10Q6XYQ8 523 aa25.05■■□□□ 1.6
SPCS3-203ENST00000507678 HEATR3Q7Z4Q2 680 aa25.05■■□□□ 1.6
SPCS3-203ENST00000507678 PDCL2Q8N4E4 241 aa25.05■■□□□ 1.6
SPCS3-203ENST00000507678 GJD4Q96KN9 370 aaPredicted RBP25.05■■□□□ 1.6
SPCS3-203ENST00000507678 CD44P16070 742 aaKnown RBP25.05■■□□□ 1.6
SPCS3-203ENST00000507678 BTDP43251 543 aa25.05■■□□□ 1.6
SPCS3-203ENST00000507678 PPP4R3BQ5MIZ7 849 aa25.05■■□□□ 1.6
SPCS3-203ENST00000507678 KIF18AQ8NI77 898 aa25.05■■□□□ 1.6
SPCS3-203ENST00000507678 ADKP55263 362 aaKnown RBP25.04■■□□□ 1.6
SPCS3-203ENST00000507678 TYW1BQ6NUM6 668 aa25.04■■□□□ 1.6
SPCS3-203ENST00000507678 CCDC34Q96HJ3 373 aa25.04■■□□□ 1.6
SPCS3-203ENST00000507678 COL24A1Q17RW2 1714 aa25.04■■□□□ 1.6
SPCS3-203ENST00000507678 CCDC88AQ3V6T2 1871 aa25.04■■□□□ 1.6
SPCS3-203ENST00000507678 ATP2C1P98194 919 aaPredicted RBP25.04■■□□□ 1.6
SPCS3-203ENST00000507678 CREBRFQ8IUR6 639 aa25.04■■□□□ 1.6
SPCS3-203ENST00000507678 ELOA2Q8IYF1 753 aaPredicted RBP25.04■■□□□ 1.6
SPCS3-203ENST00000507678 IL17AQ16552 155 aa25.03■■□□□ 1.6
SPCS3-203ENST00000507678 FAM177A1Q8N128 213 aaPredicted RBP25.03■■□□□ 1.6
SPCS3-203ENST00000507678 ENOX1Q8TC92 643 aaKnown RBP25.03■■□□□ 1.6
SPCS3-203ENST00000507678 CD209Q9NNX6 404 aa25.03■■□□□ 1.6
SPCS3-203ENST00000507678 GSTO1P78417 241 aa25.03■■□□□ 1.6
SPCS3-203ENST00000507678 PDE4CQ08493 712 aa25.03■■□□□ 1.6
SPCS3-203ENST00000507678 BLIDQ8IZY5 108 aa25.03■■□□□ 1.6
SPCS3-203ENST00000507678 ZNF215Q9UL58 517 aaPredicted RBP25.03■■□□□ 1.6
SPCS3-203ENST00000507678 BMP15O95972 392 aa25.02■■□□□ 1.6
SPCS3-203ENST00000507678 SERPINB2P05120 415 aa25.02■■□□□ 1.6
SPCS3-203ENST00000507678 C6orf229H3BNL8 230 aa25.02■■□□□ 1.6
SPCS3-203ENST00000507678 DGKHQ86XP1 1220 aa25.02■■□□□ 1.6
SPCS3-203ENST00000507678 TEX11Q8IYF3 940 aa25.02■■□□□ 1.6
SPCS3-203ENST00000507678 TRIML1Q8N9V2 468 aa25.02■■□□□ 1.6
SPCS3-203ENST00000507678 MAD2L2Q9UI95 211 aa25.02■■□□□ 1.6
SPCS3-203ENST00000507678 SEPT12Q8IYM1 358 aa25.01■■□□□ 1.59
SPCS3-203ENST00000507678 GGA1Q9UJY5 639 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms