RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 RAD21O60216 631 aa23.54■■□□□ 1.36
USP53-203ENST00000507597 RPS6KB1P23443 525 aa23.54■■□□□ 1.36
USP53-203ENST00000507597 GJA5P36382 358 aa23.54■■□□□ 1.36
USP53-203ENST00000507597 LIFRP42702 1097 aa23.54■■□□□ 1.36
USP53-203ENST00000507597 CCL15Q16663 113 aa23.54■■□□□ 1.36
USP53-203ENST00000507597 NFXL1Q6ZNB6 911 aa23.54■■□□□ 1.36
USP53-203ENST00000507597 GADL1Q6ZQY3 521 aa23.54■■□□□ 1.36
USP53-203ENST00000507597 GMCL1P1Q8NEA9 526 aa23.54■■□□□ 1.36
USP53-203ENST00000507597 ACER1Q8TDN7 264 aa23.54■■□□□ 1.36
USP53-203ENST00000507597 C12orf42Q96LP6 360 aa23.54■■□□□ 1.36
USP53-203ENST00000507597 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.54■■□□□ 1.36
USP53-203ENST00000507597 CCDC69A6NI79 296 aa23.53■■□□□ 1.36
USP53-203ENST00000507597 ALDH1A1P00352 501 aa23.53■■□□□ 1.36
USP53-203ENST00000507597 VEGFBP49765 207 aa23.53■■□□□ 1.36
USP53-203ENST00000507597 HMGCS2P54868 508 aa23.53■■□□□ 1.36
USP53-203ENST00000507597 ENAHQ8N8S7 591 aaPredicted RBP23.53■■□□□ 1.36
USP53-203ENST00000507597 TMEM47Q9BQJ4 181 aa23.53■■□□□ 1.36
USP53-203ENST00000507597 ZCCHC17Q9NP64 241 aaKnown RBP23.53■■□□□ 1.36
USP53-203ENST00000507597 TESPA1A2RU30 521 aaPredicted RBP23.52■■□□□ 1.36
USP53-203ENST00000507597 F5H6K3 240 aa23.52■■□□□ 1.36
USP53-203ENST00000507597 NMT2O60551 498 aa23.52■■□□□ 1.36
USP53-203ENST00000507597 HTRA3P83110 453 aa23.52■■□□□ 1.36
USP53-203ENST00000507597 EXOSC10Q01780 885 aaKnown RBP23.52■■□□□ 1.36
USP53-203ENST00000507597 KIF23Q02241 960 aaPredicted RBP23.52■■□□□ 1.36
USP53-203ENST00000507597 KLRC3Q07444 240 aa23.52■■□□□ 1.36
USP53-203ENST00000507597 ANKRD1Q15327 319 aa23.52■■□□□ 1.36
USP53-203ENST00000507597 ZYXQ15942 572 aaKnown RBP23.52■■□□□ 1.36
USP53-203ENST00000507597 CHST3Q7LGC8 479 aa23.52■■□□□ 1.36
USP53-203ENST00000507597 CATIPQ7Z7H3 387 aa23.52■■□□□ 1.36
USP53-203ENST00000507597 SIAH1Q8IUQ4 282 aa23.52■■□□□ 1.36
USP53-203ENST00000507597 IGDCC4Q8TDY8 1250 aa23.52■■□□□ 1.36
USP53-203ENST00000507597 MS4A4AQ96JQ5 239 aa23.52■■□□□ 1.36
USP53-203ENST00000507597 PNMA3Q9UL41 463 aa23.52■■□□□ 1.36
USP53-203ENST00000507597 A0A1W2PRG0 241 aa23.51■■□□□ 1.35
USP53-203ENST00000507597 WDR46O15213 610 aaKnown RBP23.51■■□□□ 1.35
USP53-203ENST00000507597 OSBPP22059 807 aa23.51■■□□□ 1.35
USP53-203ENST00000507597 TM4SF4P48230 202 aa23.51■■□□□ 1.35
USP53-203ENST00000507597 FBXL16Q8N461 479 aa23.51■■□□□ 1.35
USP53-203ENST00000507597 PNMA1Q8ND90 353 aa23.51■■□□□ 1.35
USP53-203ENST00000507597 TBC1D32Q96NH3 1257 aa23.51■■□□□ 1.35
USP53-203ENST00000507597 SLC45A1Q9Y2W3 748 aa23.51■■□□□ 1.35
USP53-203ENST00000507597 CALM1P0DP23 149 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 CALM2P0DP24 149 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 CALM3P0DP25 149 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 ANTXR2P58335 489 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 SEC23AQ15436 765 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 SLFN13Q68D06 897 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 RCSD1Q6JBY9 416 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 ANKRD23Q86SG2 305 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 CLEC10AQ8IUN9 316 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 LRRC47Q8N1G4 583 aaKnown RBP23.5■■□□□ 1.35
USP53-203ENST00000507597 DCAF4Q8WV16 495 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 PDRG1Q9NUG6 133 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 AGTPBP1Q9UPW5 1226 aa23.5■■□□□ 1.35
USP53-203ENST00000507597 GREB1LQ9C091 1923 aaPredicted RBP23.49■■□□□ 1.35
USP53-203ENST00000507597 USP17L15C9J2P7 530 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 USP17L13C9JLJ4 530 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 USP17L11C9JVI0 530 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 USP17L18D6R9N7 530 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 USP17L22D6RA61 530 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 USP17L17D6RBQ6 530 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 USP17L19D6RCP7 530 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 USP17L20D6RJB6 530 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 SH2B2O14492 632 aaPredicted RBP23.49■■□□□ 1.35
USP53-203ENST00000507597 SLC1A4P43007 532 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 USP17L24Q0WX57 530 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 RABEP1Q15276 862 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 GMCL1Q96IK5 515 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 BEGAINQ9BUH8 593 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 EMILIN3Q9NT22 766 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 SLC12A7Q9Y666 1083 aa23.49■■□□□ 1.35
USP53-203ENST00000507597 MAP2K1Q02750 393 aaPredicted RBP23.48■■□□□ 1.35
USP53-203ENST00000507597 Q6ZUG5 572 aa23.48■■□□□ 1.35
USP53-203ENST00000507597 SGMS1Q86VZ5 419 aa23.48■■□□□ 1.35
USP53-203ENST00000507597 ALDH8A1Q9H2A2 487 aaPredicted RBP23.48■■□□□ 1.35
USP53-203ENST00000507597 LY9Q9HBG7 655 aa23.48■■□□□ 1.35
USP53-203ENST00000507597 ISY1Q9ULR0 285 aaKnown RBP23.48■■□□□ 1.35
USP53-203ENST00000507597 AOC2O75106 756 aa23.47■■□□□ 1.35
USP53-203ENST00000507597 BMP3P12645 472 aa23.47■■□□□ 1.35
USP53-203ENST00000507597 HOXA7P31268 230 aaPredicted RBP23.47■■□□□ 1.35
USP53-203ENST00000507597 NEK4P51957 841 aa23.47■■□□□ 1.35
USP53-203ENST00000507597 IRX3P78415 501 aaPredicted RBP23.47■■□□□ 1.35
USP53-203ENST00000507597 GPATCH4Q5T3I0 446 aaKnown RBP23.47■■□□□ 1.35
USP53-203ENST00000507597 GTF3C2Q8WUA4 911 aaPredicted RBP23.47■■□□□ 1.35
USP53-203ENST00000507597 CHURC1Q8WUH1 139 aa23.47■■□□□ 1.35
USP53-203ENST00000507597 BRI3BPQ8WY22 251 aa23.47■■□□□ 1.35
USP53-203ENST00000507597 MAP3K14Q99558 947 aa23.47■■□□□ 1.35
USP53-203ENST00000507597 UPF3BQ9BZI7 483 aaKnown RBP23.47■■□□□ 1.35
USP53-203ENST00000507597 ST18O60284 1047 aa23.46■■□□□ 1.35
USP53-203ENST00000507597 DDAH1O94760 285 aa23.46■■□□□ 1.35
USP53-203ENST00000507597 NDUFB10O96000 172 aa23.46■■□□□ 1.35
USP53-203ENST00000507597 VCAM1P19320 739 aa23.46■■□□□ 1.35
USP53-203ENST00000507597 KIF5BP33176 963 aa23.46■■□□□ 1.35
USP53-203ENST00000507597 PPP2R5BQ15173 497 aa23.46■■□□□ 1.35
USP53-203ENST00000507597 IFNL1Q8IU54 200 aa23.46■■□□□ 1.35
USP53-203ENST00000507597 LRRC2Q9BYS8 371 aa23.46■■□□□ 1.35
USP53-203ENST00000507597 RPAP3Q9H6T3 665 aaPredicted RBP23.46■■□□□ 1.35
USP53-203ENST00000507597 HOXC10Q9NYD6 342 aa23.46■■□□□ 1.35
USP53-203ENST00000507597 BTBD19C9JJ37 291 aa23.45■■□□□ 1.34
USP53-203ENST00000507597 RCAN1P53805 252 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms